version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 434 61.99 0 475522..476334 - 270 66043705 - Psyr_0438 - phospholipid/glycerol acyltransferase 435 60.42 0 476310..477029 - 239 66043706 - Psyr_0439 - hypothetical protein 436 57.82 0 477339..478118 + 259 66043707 - Psyr_0440 - cobyrinic acid a,c-diamide synthase 437 62.88 0 478811..479206 - 131 66043708 - Psyr_0441 - hypothetical protein 438 63.33 0 479613..481289 + 558 66043709 - Psyr_0442 - malonate decarboxylase, alpha subunit 439 66.55 +1 481289..482164 + 291 66043710 - Psyr_0443 - triphosphoribosyl-dephospho-CoA synthase 440 62.33 0 482166..482465 + 99 66043711 - Psyr_0444 - malonate decarboxylase subunit delta 441 63.38 0 482458..483309 + 283 66043712 - Psyr_0445 - malonate decarboxylase subunit beta 442 64.17 +1 483306..484106 + 266 66043713 - Psyr_0446 - malonate decarboxylase gamma subunit 443 67.76 +2 484100..484741 + 213 66043714 - Psyr_0447 - phosphoribosyl-dephospho-CoA transferase 444 66.77 +1 484738..485673 + 311 66043715 - Psyr_0448 - acyl-carrier-protein S-malonyltransferase 445 62.11 0 485743..486159 + 138 66043716 - Psyr_0449 - malonate transporter MadL subunit 446 64.31 +1 486161..486925 + 254 66043717 - Psyr_0450 - malonate/sodium symporter MadM subunit 447 60.30 0 486927..487853 - 308 66043718 - Psyr_0451 - regulatory protein, LysR:LysR, substrate-binding 448 58.05 0 487976..488590 + 204 66043719 - Psyr_0452 - HylII 449 63.19 0 488697..489416 - 239 66043720 - Psyr_0453 - hypothetical protein 450 61.27 0 489548..490954 - 468 66043721 - Psyr_0454 - adenosylmethionine--8-amino-7-oxononanoate transaminase 451 62.29 0 491164..493038 + 624 66043722 - Psyr_0455 - amine oxidase 452 57.38 0 493396..493944 + 182 66043723 - Psyr_0456 - cytochrome B561 453 56.30 0 493972..494550 + 192 66043724 - Psyr_0457 - hypothetical protein 454 64.34 +1 494944..496833 - 629 66043725 - Psyr_0458 - helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal 455 59.81 0 497145..497990 - 281 66043726 - Psyr_0459 - 5,10-methylenetetrahydrofolate reductase 456 58.72 0 498180..499589 - 469 66043727 - Psyr_0460 - S-adenosyl-L-homocysteine hydrolase 457 55.56 0 499944..500339 + 131 66043728 - Psyr_0461 - thioesterase superfamily protein 458 61.58 0 500492..501277 - 261 66043729 - Psyr_0462 - hydroxypyruvate isomerase 459 64.47 +1 501300..502757 - 485 66043730 - Psyr_0463 - gluconate transporter 460 64.63 +1 502892..503530 - 212 66043731 - Psyr_0464 - putative aldolase 461 65.12 +1 503530..504819 - 429 66043732 - Psyr_0465 - type III effector HopAN1 462 62.69 0 504830..505735 - 301 66043733 - Psyr_0466 - 3-hydroxyisobutyrate dehydrogenase 463 59.65 0 505961..506416 - 151 66043734 - Psyr_0467 - hypothetical protein 464 61.21 0 506590..507798 - 402 66043735 - Psyr_0468 - aminotransferase 465 63.15 0 508137..509984 + 615 66043736 - Psyr_0469 - dihydroxy-acid dehydratase 466 63.89 +1 510060..510383 - 107 66043737 - Psyr_0470 - hypothetical protein 467 61.15 0 510393..511607 - 404 66043738 - Psyr_0471 - coproporphyrinogen III oxidase 468 64.65 +1 511604..512197 - 197 66043739 - Psyr_0472 - putative deoxyribonucleotide triphosphate pyrophosphatase 469 61.03 0 512231..512851 - 206 66043740 - Psyr_0473 - methionine biosynthesis MetW 470 61.14 0 512859..513998 - 379 66043741 metX Psyr_0474 - homoserine O-acetyltransferase 471 59.73 0 514265..514855 - 196 66043742 - Psyr_0475 - hypothetical protein 472 64.47 +1 514881..515699 - 272 66043743 - Psyr_0476 - pyrroline-5-carboxylate reductase 473 61.28 0 515721..516407 - 228 66043744 - Psyr_0477 - hypothetical protein 474 60.48 0 516463..517497 + 344 66043745 - Psyr_0478 - pilus retraction protein PilT 475 60.03 0 517592..518269 - 225 66043746 - Psyr_0479 - NLP/P60 476 58.02 0 518520..518924 + 134 66043747 - Psyr_0480 - TM2 477 67.22 +1 519207..520478 - 423 66043748 pyrC Psyr_0481 - dihydroorotase 478 63.48 0 520475..521479 - 334 66043749 pyrB Psyr_0482 - aspartate carbamoyltransferase catalytic subunit 479 63.55 +1 521492..522004 - 170 66043750 - Psyr_0483 - pyrimidine regulatory protein PyrR 480 61.45 0 522103..522543 - 146 66043751 - Psyr_0484 - Holliday junction resolvase-like protein 481 59.16 0 522543..523115 - 190 66043752 - Psyr_0485 - hypothetical protein 482 59.03 0 523191..524093 - 300 66043753 - Psyr_0486 - TonB, C-terminal 483 62.19 0 524260..525219 - 319 66043754 - Psyr_0487 - glutathione synthetase 484 54.99 -1 525474..525884 + 136 66043755 - Psyr_0488 - response regulator receiver 485 57.65 0 525931..526296 + 121 66043756 - Psyr_0489 - response regulator receiver 486 60.56 0 526311..526850 + 179 66043757 - Psyr_0490 - CheW-like protein 487 61.67 0 526901..528943 + 680 66043758 - Psyr_0491 - chemotaxis sensory transducer 488 63.71 +1 528991..534969 + 1992 66043759 - Psyr_0492 - response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt 489 64.97 +1 534962..535432 + 156 66043760 - Psyr_0493 - CheW-like protein 490 61.48 0 535554..537017 - 487 66043761 - Psyr_0494 - hypothetical protein 491 58.67 0 537156..537905 - 249 66043762 - Psyr_0495 - transcriptional regulator GntR 492 62.29 0 538075..539307 + 410 66043763 - Psyr_0496 - hypothetical protein 493 65.75 +1 539323..540087 + 254 66043764 - Psyr_0497 - hypothetical protein 494 65.28 +1 540090..540884 + 264 66043765 - Psyr_0498 - hypothetical protein 495 64.80 +1 540894..542498 + 534 66043766 - Psyr_0499 - Urea amidolyase-related protein 496 64.88 +1 542495..544228 + 577 66043767 - Psyr_0500 - carbamoyl-phosphate synthase subunit L 497 61.67 0 544287..547691 - 1134 66043768 - Psyr_0501 - potassium efflux protein KefA 498 62.77 0 547715..549457 - 580 161486740 - Psyr_0502 - potassium/proton antiporter 499 57.16 0 549707..552841 + 1044 66043770 - Psyr_0503 - hypothetical protein 500 58.10 0 552941..555589 + 882 66043771 - Psyr_0504 - hypothetical protein 501 59.46 0 555612..557414 - 600 66043772 - Psyr_0505 - Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region 502 62.75 0 557685..561638 - 1317 161486739 putA Psyr_0506 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 503 59.29 0 562015..563574 + 519 66043774 - Psyr_0507 - Na+/solute symporter 504 52.23 -1 563658..564329 - 223 66043775 - Psyr_0508 - lyase, putative 505 58.24 0 564626..566785 + 719 66043776 - Psyr_0509 - PAS:GGDEF 506 59.62 0 566818..567342 + 174 66043777 - Psyr_0510 - hypothetical protein 507 59.60 0 567369..567665 + 98 66043778 - Psyr_0511 - hypothetical protein 508 60.13 0 567673..568131 - 152 66043779 - Psyr_0512 - GCN5-related N-acetyltransferase 509 58.07 0 568358..569113 + 251 66043780 - Psyr_0513 - extracellular solute-binding protein 510 62.66 0 569076..571274 - 732 66043781 - Psyr_0514 - intergral membrane protein, YccS:integral membrane protein, YccS/YhfK 511 60.90 0 571412..572590 - 392 66043782 - Psyr_0515 - hypothetical protein 512 61.46 0 572766..574187 - 473 66043783 - Psyr_0516 - ATP-dependent RNA helicase DbpA 513 63.80 +1 574465..576138 - 557 66043784 - Psyr_0517 - dihydrolipoamide acetyltransferase 514 59.75 0 576281..578926 - 881 66043785 aceE Psyr_0518 - pyruvate dehydrogenase subunit E1 515 63.08 0 579311..582268 + 985 66043786 - Psyr_0519 - glutamate-ammonia-ligase adenylyltransferase 516 63.96 +1 582398..583432 + 344 66043787 - Psyr_0520 - glycosyl transferase family protein 517 64.69 +1 583435..584499 + 354 66043788 - Psyr_0521 - glycosyl transferase family protein 518 60.61 0 584499..585620 + 373 66043789 - Psyr_0522 - glycosyl transferase, group 1 519 61.59 0 585620..586426 + 268 66043790 - Psyr_0523 - lipopolysaccharide kinase 520 58.78 0 586426..587160 + 244 66043791 - Psyr_0524 - lipopolysaccharide kinase 521 60.64 0 587157..587936 + 259 66043792 - Psyr_0525 - lipopolysaccharide kinase 522 62.17 0 587936..589381 + 481 66043793 - Psyr_0526 - hypothetical protein 523 61.72 0 589549..595677 - 2042 66043794 - Psyr_0527 - type III effector HopAC1 524 59.84 0 595978..597735 + 585 66043795 - Psyr_0528 - carbamoyltransferase 525 62.25 0 597719..598849 + 376 66043796 - Psyr_0529 - glycosyl transferase, group 1 526 62.21 0 598849..599745 + 298 66043797 - Psyr_0530 - Mig-14 527 64.54 +1 599742..601151 + 469 66043798 - Psyr_0531 - LmbE-like protein 528 58.20 0 601182..602138 + 318 66043799 - Psyr_0532 - hypothetical protein 529 54.26 -1 602170..602943 + 257 66043800 - Psyr_0533 - hypothetical protein 530 58.97 0 602933..604102 + 389 66043801 - Psyr_0534 - hypothetical protein 531 59.52 0 604151..604906 - 251 66043802 - Psyr_0535 - toluene tolerance protein, putative 532 60.29 0 604905..606707 + 600 66043803 - Psyr_0536 - ABC transporter, transmembrane region:ABC transporter 533 63.23 0 606836..608260 + 474 66043804 - Psyr_0537 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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