version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4192 57.27 0 5048468..5049883 + 471 66047464 - Psyr_4237 - outer membrane porin 4193 55.45 0 5049950..5051545 + 531 66047465 - Psyr_4238 - extracellular solute-binding protein 4194 59.64 0 5051620..5052630 + 336 66047466 - Psyr_4239 - binding-protein dependent transport system inner membrane protein 4195 63.05 0 5052641..5053552 + 303 66047467 - Psyr_4240 - binding-protein dependent transport system inner membrane protein 4196 62.75 0 5053563..5054531 + 322 66047468 - Psyr_4241 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 4197 62.46 0 5054531..5055505 + 324 66047469 dppF Psyr_4242 - dipeptide transporter ATP-binding subunit 4198 61.71 0 5055641..5058163 - 840 66047470 - Psyr_4243 - oxidoreductase FAD/NAD(P)-binding:PepSY-associated TM helix:flavodoxin/nitric oxide synthase 4199 50.44 -2 5058505..5059749 + 414 66047471 - Psyr_4244 - hypothetical protein 4200 55.26 0 5059742..5060749 + 335 66047472 - Psyr_4245 - hypothetical protein 4201 57.41 0 5060863..5061672 + 269 66047473 - Psyr_4246 - hypothetical protein 4202 56.19 0 5061734..5062897 - 387 66047474 - Psyr_4247 - ornithine decarboxylase 4203 54.67 -1 5063393..5065867 + 824 66047475 - Psyr_4248 - hypothetical protein 4204 60.41 0 5066557..5067723 - 388 66047476 - Psyr_4249 - glycine betaine/L-proline transport ATP-binding subunit 4205 61.93 0 5067720..5068373 - 217 66047477 - Psyr_4250 - binding-protein dependent transport system inner membrane protein 4206 56.82 0 5068387..5069280 - 297 66047478 - Psyr_4251 - substrate-binding region of ABC-type glycine betaine transport system 4207 60.50 0 5069295..5070008 - 237 66047479 - Psyr_4252 - binding-protein dependent transport system inner membrane protein 4208 60.16 0 5070353..5071936 + 527 66047480 prfC Psyr_4253 - peptide chain release factor 3 4209 55.56 0 5072562..5072804 + 80 66047481 - Psyr_4254 - hypothetical protein 4210 62.30 0 5072884..5073501 - 205 66047482 - Psyr_4255 - FKBP-type peptidyl-prolyl isomerase, N-terminal:peptidylprolyl isomerase, FKBP-type 4211 56.96 0 5073656..5073964 - 102 66047483 - Psyr_4256 - hypothetical protein 4212 51.33 -1 5074073..5074561 - 162 66047484 - Psyr_4257 - hypothetical protein 4213 55.76 0 5074682..5075011 - 109 66047485 - Psyr_4258 - hypothetical protein 4214 62.03 0 5075180..5077615 - 811 66047486 - Psyr_4259 - ATP-dependent protease, putative 4215 57.67 0 5077892..5078380 + 162 66047487 - Psyr_4260 - hypothetical protein 4216 61.00 0 5078443..5080296 + 617 66047488 - Psyr_4261 - hypothetical protein 4217 61.02 0 5080430..5080783 + 117 66047489 - Psyr_4262 - putative lipoprotein 4218 62.05 0 5080858..5081355 + 165 66047490 - Psyr_4263 - transcription elongation factor GreA/GreB 4219 60.00 0 5081416..5083080 - 554 66047491 - Psyr_4264 - putative ABC transporter ATP-binding protein 4220 61.95 0 5083463..5087299 + 1278 66047492 - Psyr_4265 - PAS:GGDEF 4221 61.43 0 5087439..5088431 + 330 66047493 - Psyr_4266 - regulatory protein, LuxR 4222 62.08 0 5088571..5089464 + 297 66047494 - Psyr_4267 - hypothetical protein 4223 65.98 +1 5089512..5090963 + 483 66047495 - Psyr_4268 - amidase 4224 61.86 0 5091033..5093777 - 914 66047496 - Psyr_4269 - type III effector HopAE1 4225 62.20 0 5094122..5095375 + 417 66047497 glyA Psyr_4270 - serine hydroxymethyltransferase 4226 61.66 0 5095480..5096457 - 325 66047498 - Psyr_4271 - cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K 4227 59.60 0 5096553..5096750 - 65 66047499 - Psyr_4272 - hypothetical protein 4228 61.56 0 5096778..5098853 - 691 66047500 - Psyr_4273 - carbon starvation protein CstA 4229 57.72 0 5099138..5099506 + 122 66047501 - Psyr_4274 - hypothetical protein 4230 64.11 +1 5099513..5100880 - 455 66047502 - Psyr_4275 - DNA repair protein RadA 4231 58.17 0 5101077..5101523 + 148 66047503 mscL Psyr_4276 - large-conductance mechanosensitive channel 4232 58.04 0 5101714..5102490 - 258 66047504 - Psyr_4277 - oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region 4233 51.71 -1 5102827..5103060 + 77 66047505 - Psyr_4278 - regulatory protein, LuxR 4234 63.91 +1 5103190..5104314 + 374 66047506 - Psyr_4279 - rRNA (guanine-N(2)-)-methyltransferase 4235 60.12 0 5104406..5104573 - 55 66047507 - Psyr_4280 - hypothetical protein 4236 59.82 0 5104595..5105602 - 335 66047508 - Psyr_4281 - cytochrome bd ubiquinol oxidase, subunit II 4237 59.79 0 5105606..5107045 - 479 66047509 - Psyr_4282 - cytochrome bd ubiquinol oxidase, subunit I 4238 61.94 0 5107520..5109721 - 733 66047510 - Psyr_4283 - aldehyde oxidase and xanthine dehydrogenase 4239 61.82 0 5109718..5110707 - 329 66047511 - Psyr_4284 - molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal 4240 61.96 0 5110704..5111234 - 176 66047512 - Psyr_4285 - ferredoxin:[2Fe-2S]-binding 4241 62.11 0 5111500..5112795 + 431 66047513 - Psyr_4286 - xanthine/uracil/vitamin C permease 4242 63.90 +1 5112792..5113877 + 361 66047514 - Psyr_4287 - tRNA (uracil-5-)-methyltransferase 4243 63.44 0 5114376..5115677 + 433 66047515 - Psyr_4288 - hypothetical protein 4244 61.28 0 5115850..5116740 + 296 66047516 - Psyr_4289 - hypothetical protein 4245 61.52 0 5116745..5117734 + 329 66047517 - Psyr_4290 - hypothetical protein 4246 56.28 0 5117796..5118161 + 121 66047518 - Psyr_4291 - hypothetical protein 4247 61.59 0 5119039..5119629 - 196 66047519 - Psyr_4292 - HAD family hydrolase 4248 61.38 0 5119626..5120495 - 289 66047520 - Psyr_4293 - Acyl-CoA thioesterase 4249 61.75 0 5120635..5121204 - 189 66047521 - Psyr_4294 - histone deacetylase family protein 4250 61.66 0 5121325..5122242 + 305 66047522 - Psyr_4295 - histone deacetylase superfamily protein 4251 63.76 +1 5122313..5123587 + 424 66047523 - Psyr_4296 - hypothetical protein 4252 62.15 0 5123836..5125164 - 442 66047524 - Psyr_4297 - helicase, C-terminal:DEAD/DEAH box helicase, N-terminal 4253 63.83 +1 5125227..5126141 - 304 66047525 - Psyr_4298 - hypothetical protein 4254 58.33 0 5126309..5126776 + 155 66047526 - Psyr_4299 - helix-turn-helix, Fis-type 4255 62.60 0 5126781..5127395 - 204 66047527 - Psyr_4300 - DNA polymerase III, epsilon subunit 4256 58.91 0 5127414..5127890 - 158 66047528 - Psyr_4301 - hypothetical protein 4257 62.13 0 5128171..5128875 - 234 66047529 - Psyr_4302 - hypothetical protein 4258 58.82 0 5129073..5129735 + 220 66047530 - Psyr_4303 - hypothetical protein 4259 61.42 0 5129769..5130911 + 380 66047531 - Psyr_4304 - endonuclease/exonuclease/phosphatase 4260 46.18 -2 5131096..5131344 + 82 66047532 - Psyr_4305 - hypothetical protein 4261 50.00 -2 5131449..5131646 - 65 66047533 - Psyr_4306 - hypothetical protein 4262 46.37 -2 5132214..5133149 - 311 66047534 - Psyr_4307 - hypothetical protein 4263 59.54 0 5133734..5135290 - 518 66047535 - Psyr_4308 - hypothetical protein 4264 44.23 -2 5135391..5136005 - 204 66047536 - Psyr_4309 - hypothetical protein 4265 47.97 -2 5136129..5137064 - 311 66047537 - Psyr_4310 - hypothetical protein 4266 52.15 -1 5137115..5140282 - 1055 66047538 - Psyr_4311 - malonyl CoA-acyl carrier protein transacylase 4267 53.55 -1 5140287..5147069 - 2260 66047539 - Psyr_4312 - erythronolide synthase 4268 56.07 0 5147125..5154306 - 2393 66047540 - Psyr_4313 - beta-ketoacyl synthase 4269 53.93 -1 5154317..5164012 - 3231 66047541 - Psyr_4314 - beta-ketoacyl synthase 4270 49.27 -2 5164033..5166009 - 658 66047542 - Psyr_4315 - asparagine synthase, glutamine-hydrolyzing 4271 39.84 -2 5166246..5166491 - 81 66047543 - Psyr_4316 - hypothetical protein 4272 44.97 -2 5166566..5167579 - 337 66047544 - Psyr_4317 - taurine catabolism dioxygenase 4273 49.35 -2 5168966..5169964 + 332 66047545 - Psyr_4318 - regulatory protein, LysR:LysR, substrate-binding 4274 54.80 -1 5170451..5170846 - 131 66047546 - Psyr_4319 - silent information regulator protein Sir2 4275 64.42 +1 5170887..5173421 - 844 66047547 - Psyr_4320 - ATP-dependent helicase HrpB 4276 48.06 -2 5173582..5174484 - 300 66047548 - Psyr_4321 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 4277 52.42 -1 5174459..5175679 - 406 66047549 - Psyr_4322 - hypothetical protein 4278 48.99 -2 5175676..5176467 - 263 66047550 - Psyr_4323 - synthetase, putative 4279 50.78 -2 5176464..5177168 - 234 66047551 - Psyr_4324 - Serine O-acetyltransferase 4280 56.23 0 5177347..5178687 + 446 66047552 - Psyr_4325 - transcriptional regulator GntR 4281 57.96 0 5178780..5179790 - 336 66047553 - Psyr_4326 - type III effector HopI1 4282 65.36 +1 5179913..5180296 - 127 66047554 - Psyr_4327 - endoribonuclease L-PSP 4283 62.11 0 5180458..5181159 + 233 66047555 - Psyr_4328 - hypothetical protein 4284 60.19 0 5181396..5181935 + 179 66047556 - Psyr_4329 - hypothetical protein 4285 61.63 0 5181945..5182838 - 297 66047557 - Psyr_4330 - hypothetical protein 4286 62.57 0 5182992..5183918 - 308 66047558 - Psyr_4331 - D-galactose 1-dehydrogenase 4287 58.81 0 5184193..5184612 + 139 66047559 - Psyr_4332 - hypothetical protein 4288 62.19 0 5184638..5185531 + 297 66047560 - Psyr_4333 - cation efflux protein 4289 61.35 0 5185538..5186704 - 388 66047561 - Psyr_4334 - hypothetical protein 4290 58.13 0 5187086..5187577 + 163 66047562 - Psyr_4335 - regulatory proteins, AsnC/Lrp 4291 64.93 +1 5187591..5188223 - 210 66047563 - Psyr_4336 - pseudouridine synthase, Rsu 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.