version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 375 60.13 0 408100..410043 - 647 66043646 - Psyr_0379 - histidine kinase, HAMP region: chemotaxis sensory transducer 376 60.15 0 410246..412162 - 638 66043647 - Psyr_0380 - histidine kinase, HAMP region: chemotaxis sensory transducer 377 61.72 0 412251..412958 - 235 66043648 - Psyr_0381 - hypothetical protein 378 59.68 0 412955..413755 - 266 66043649 - Psyr_0382 - Sec-independent periplasmic protein translocase 379 62.47 0 413752..414228 - 158 66043650 tatB Psyr_0383 - sec-independent translocase 380 58.33 0 414233..414508 - 91 66043651 tatA Psyr_0384 - twin argininte translocase protein A 381 58.26 0 414553..414885 - 110 66043652 hisE Psyr_0385 - phosphoribosyl-ATP pyrophosphatase 382 56.23 0 414888..415280 - 130 66043653 hisI Psyr_0386 - phosphoribosyl-AMP cyclohydrolase 383 61.98 0 415348..416967 - 539 66043654 - Psyr_0387 - 2-polyprenylphenol 6-hydroxylase 384 63.78 +1 416964..417587 - 207 66043655 - Psyr_0388 - hypothetical protein 385 59.79 0 417587..418357 - 256 66043656 ubiE Psyr_0389 - ubiquinone/menaquinone biosynthesis methyltransferase 386 59.86 0 418502..418780 + 92 66043657 - Psyr_0390 - hypothetical protein 387 59.88 0 419054..419746 + 230 66043658 - Psyr_0391 - Poly granule associated 388 60.78 0 419859..420164 + 101 66043659 - Psyr_0392 - hypothetical protein 389 57.80 0 420148..420519 - 123 66043660 - Psyr_0393 - hypothetical protein 390 59.12 0 420627..421964 - 445 66043661 hslU Psyr_0394 - ATP-dependent protease ATP-binding subunit 391 61.83 0 422031..422609 - 192 66043662 - Psyr_0395 - ATP-dependent protease peptidase subunit 392 62.64 0 422977..423672 - 231 66043663 - Psyr_0396 - sporulation related 393 61.21 0 423674..425413 - 579 66043664 argS Psyr_0397 - arginyl-tRNA synthetase 394 65.32 +1 425511..427730 - 739 66043665 - Psyr_0398 - primosome assembly protein PriA 395 55.41 0 427900..428121 + 73 66043666 rpmE Psyr_0399 - 50S ribosomal protein L31 396 64.93 +1 428135..428938 + 267 66043667 - Psyr_0400 - nuclease 397 59.10 0 429120..430388 + 422 66043668 - Psyr_0401 - malate dehydrogenase 398 60.98 0 430973..433417 - 814 66043669 - Psyr_0402 - peptidoglycan glycosyltransferase 399 61.31 0 433624..434688 + 354 66043670 - Psyr_0403 - Type IV pilus assembly protein PilM 400 58.33 0 434688..435263 + 191 66043671 - Psyr_0404 - fimbrial assembly 401 58.33 0 435260..435883 + 207 66043672 - Psyr_0405 - pilus assembly protein, PilO 402 59.85 0 435880..436407 + 175 66043673 - Psyr_0406 - pilus assembly protein, PilQ 403 60.64 0 436404..438560 + 718 66043674 - Psyr_0407 - type II and III secretion system protein:NolW-like:NolW-like 404 60.12 0 438565..439083 + 172 66043675 aroK Psyr_0408 - shikimate kinase 405 61.50 0 439198..440301 + 367 66043676 aroB Psyr_0409 - 3-dehydroquinate synthase 406 62.72 0 440312..441934 + 540 66043677 - Psyr_0410 - hypothetical protein 407 61.49 0 442293..446738 + 1481 66043678 gltB Psyr_0411 - glutamate synthase subunit alpha 408 61.31 0 446857..448275 + 472 66043679 gltD Psyr_0412 - glutamate synthase subunit beta 409 57.36 0 448609..451833 + 1074 66043680 - Psyr_0413 - hypothetical protein 410 62.44 0 451965..453029 + 354 66043681 hemE Psyr_0414 - uroporphyrinogen decarboxylase 411 63.08 0 453090..454565 - 491 66043682 - Psyr_0415 - N-acyl-D-amino-acid deacylase 412 63.88 +1 454569..455429 - 286 66043683 - Psyr_0416 - helix-turn-helix protein RpiR:sugar isomerase (SIS) 413 61.70 0 455430..456779 - 449 66043684 - Psyr_0417 - gluconate transporter 414 54.17 -1 457049..457696 - 215 66043685 - Psyr_0418 - hypothetical protein 415 54.11 -1 457693..458958 - 421 66043686 - Psyr_0419 - hypothetical protein 416 62.96 0 459036..460304 - 422 66043687 - Psyr_0420 - major facilitator transporter 417 62.96 0 460420..461310 + 296 66043688 - Psyr_0421 - regulatory protein, LysR:LysR, substrate-binding 418 63.41 0 461547..462773 - 408 66043689 - Psyr_0422 - 3-oxoacyl-(acyl carrier protein) synthase II 419 63.65 +1 462773..463501 - 242 66043690 fabG Psyr_0423 - 3-ketoacyl-(acyl-carrier-protein) reductase 420 62.28 0 463498..463953 - 151 66043691 - Psyr_0424 - hypothetical protein 421 65.25 +1 463950..465146 - 398 66043692 - Psyr_0425 - 3-oxoacyl-(acyl carrier protein) synthase I 422 61.28 0 465143..465625 - 160 66043693 - Psyr_0426 - putative lipoprotein 423 61.22 0 465622..466356 - 244 66043694 - Psyr_0427 - hypothetical protein 424 62.50 0 466353..467600 - 415 66043695 - Psyr_0428 - monooxygenase, FAD-binding 425 64.98 +1 467655..470030 - 791 66043696 - Psyr_0429 - hypothetical protein 426 60.81 0 470002..470616 - 204 66043697 - Psyr_0430 - hypothetical protein 427 56.00 0 470613..471062 - 149 66043698 - Psyr_0431 - thioesterase superfamily protein 428 63.40 0 471117..472064 - 315 66043699 - Psyr_0432 - hypothetical protein 429 63.13 0 472061..472795 - 244 66043700 - Psyr_0433 - glycosyl transferase family protein 430 66.84 +1 472788..474479 - 563 66043701 - Psyr_0434 - AMP-dependent synthetase and ligase 431 62.09 0 474481..475026 - 181 66043702 - Psyr_0435 - hypothetical protein 432 52.55 -1 475023..475277 - 84 66043703 - Psyr_0436 - acyl carrier protein 433 56.32 0 475287..475547 - 86 66043704 - Psyr_0437 - acyl carrier protein, putative 434 61.99 0 475522..476334 - 270 66043705 - Psyr_0438 - phospholipid/glycerol acyltransferase 435 60.42 0 476310..477029 - 239 66043706 - Psyr_0439 - hypothetical protein 436 57.82 0 477339..478118 + 259 66043707 - Psyr_0440 - cobyrinic acid a,c-diamide synthase 437 62.88 0 478811..479206 - 131 66043708 - Psyr_0441 - hypothetical protein 438 63.33 0 479613..481289 + 558 66043709 - Psyr_0442 - malonate decarboxylase, alpha subunit 439 66.55 +1 481289..482164 + 291 66043710 - Psyr_0443 - triphosphoribosyl-dephospho-CoA synthase 440 62.33 0 482166..482465 + 99 66043711 - Psyr_0444 - malonate decarboxylase subunit delta 441 63.38 0 482458..483309 + 283 66043712 - Psyr_0445 - malonate decarboxylase subunit beta 442 64.17 +1 483306..484106 + 266 66043713 - Psyr_0446 - malonate decarboxylase gamma subunit 443 67.76 +2 484100..484741 + 213 66043714 - Psyr_0447 - phosphoribosyl-dephospho-CoA transferase 444 66.77 +1 484738..485673 + 311 66043715 - Psyr_0448 - acyl-carrier-protein S-malonyltransferase 445 62.11 0 485743..486159 + 138 66043716 - Psyr_0449 - malonate transporter MadL subunit 446 64.31 +1 486161..486925 + 254 66043717 - Psyr_0450 - malonate/sodium symporter MadM subunit 447 60.30 0 486927..487853 - 308 66043718 - Psyr_0451 - regulatory protein, LysR:LysR, substrate-binding 448 58.05 0 487976..488590 + 204 66043719 - Psyr_0452 - HylII 449 63.19 0 488697..489416 - 239 66043720 - Psyr_0453 - hypothetical protein 450 61.27 0 489548..490954 - 468 66043721 - Psyr_0454 - adenosylmethionine--8-amino-7-oxononanoate transaminase 451 62.29 0 491164..493038 + 624 66043722 - Psyr_0455 - amine oxidase 452 57.38 0 493396..493944 + 182 66043723 - Psyr_0456 - cytochrome B561 453 56.30 0 493972..494550 + 192 66043724 - Psyr_0457 - hypothetical protein 454 64.34 +1 494944..496833 - 629 66043725 - Psyr_0458 - helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal 455 59.81 0 497145..497990 - 281 66043726 - Psyr_0459 - 5,10-methylenetetrahydrofolate reductase 456 58.72 0 498180..499589 - 469 66043727 - Psyr_0460 - S-adenosyl-L-homocysteine hydrolase 457 55.56 0 499944..500339 + 131 66043728 - Psyr_0461 - thioesterase superfamily protein 458 61.58 0 500492..501277 - 261 66043729 - Psyr_0462 - hydroxypyruvate isomerase 459 64.47 +1 501300..502757 - 485 66043730 - Psyr_0463 - gluconate transporter 460 64.63 +1 502892..503530 - 212 66043731 - Psyr_0464 - putative aldolase 461 65.12 +1 503530..504819 - 429 66043732 - Psyr_0465 - type III effector HopAN1 462 62.69 0 504830..505735 - 301 66043733 - Psyr_0466 - 3-hydroxyisobutyrate dehydrogenase 463 59.65 0 505961..506416 - 151 66043734 - Psyr_0467 - hypothetical protein 464 61.21 0 506590..507798 - 402 66043735 - Psyr_0468 - aminotransferase 465 63.15 0 508137..509984 + 615 66043736 - Psyr_0469 - dihydroxy-acid dehydratase 466 63.89 +1 510060..510383 - 107 66043737 - Psyr_0470 - hypothetical protein 467 61.15 0 510393..511607 - 404 66043738 - Psyr_0471 - coproporphyrinogen III oxidase 468 64.65 +1 511604..512197 - 197 66043739 - Psyr_0472 - putative deoxyribonucleotide triphosphate pyrophosphatase 469 61.03 0 512231..512851 - 206 66043740 - Psyr_0473 - methionine biosynthesis MetW 470 61.14 0 512859..513998 - 379 66043741 metX Psyr_0474 - homoserine O-acetyltransferase 471 59.73 0 514265..514855 - 196 66043742 - Psyr_0475 - hypothetical protein 472 64.47 +1 514881..515699 - 272 66043743 - Psyr_0476 - pyrroline-5-carboxylate reductase 473 61.28 0 515721..516407 - 228 66043744 - Psyr_0477 - hypothetical protein 474 60.48 0 516463..517497 + 344 66043745 - Psyr_0478 - pilus retraction protein PilT 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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