version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4164 58.54 0 5013079..5014383 - 434 66047436 - Psyr_4209 - chemotaxis sensory transducer 4165 63.53 0 5014645..5015823 - 392 66047437 - Psyr_4210 - Na+/H+ antiporter NhaA 4166 59.14 0 5015990..5017504 - 504 66047438 - Psyr_4211 - extracellular solute-binding protein 4167 63.40 0 5017555..5018535 - 326 66047439 - Psyr_4212 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 4168 64.55 +1 5018532..5019524 - 330 66047440 - Psyr_4213 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 4169 62.04 0 5019521..5020384 - 287 66047441 - Psyr_4214 - binding-protein dependent transport system inner membrane protein 4170 61.08 0 5020381..5021328 - 315 66047442 - Psyr_4215 - binding-protein dependent transport system inner membrane protein 4171 60.13 0 5021667..5022431 + 254 66047443 - Psyr_4216 - regulatory protein, LuxR 4172 56.82 0 5022527..5023450 + 307 66047444 - Psyr_4217 - peptidase S33, tricorn interacting factor 1 4173 58.67 0 5023714..5025339 + 541 66047445 - Psyr_4218 - histidine kinase, HAMP region: chemotaxis sensory transducer 4174 53.69 -1 5025750..5026250 + 166 66047446 - Psyr_4219 - hypothetical protein 4175 62.28 0 5026264..5026719 - 151 66047447 - Psyr_4220 - GCN5-related N-acetyltransferase 4176 60.53 0 5027082..5028905 + 607 66047448 - Psyr_4221 - EAL:GAF 4177 61.32 0 5028997..5029782 + 261 66047449 - Psyr_4222 - hypothetical protein 4178 55.22 0 5030003..5030203 + 66 66047450 - Psyr_4223 - hypothetical protein 4179 53.75 -1 5030840..5031079 - 79 66047451 - Psyr_4224 - hypothetical protein 4180 61.71 0 5031323..5032876 - 517 66047452 - Psyr_4225 - galactarate dehydratase 4181 59.02 0 5032887..5034272 - 461 66047453 - Psyr_4226 - D-galactonate transporter 4182 60.42 0 5034437..5035348 - 303 66047454 - Psyr_4227 - 5-dehydro-4-deoxyglucarate dehydratase 4183 62.40 0 5035648..5036397 - 249 66047455 - Psyr_4228 - transcriptional regulator GntR 4184 60.85 0 5036511..5038229 - 572 66047456 - Psyr_4229 - ABC transporter:ABC transporter, N-terminal 4185 62.94 0 5038319..5038882 - 187 66047457 - Psyr_4230 - helix-turn-helix, Fis-type 4186 61.67 0 5038879..5040138 - 419 66047458 - Psyr_4231 - sensor histidine kinase 4187 62.18 0 5040331..5041044 + 237 66047459 - Psyr_4232 - hypothetical protein 4188 58.70 0 5041254..5042810 + 518 66047460 - Psyr_4233 - hypothetical protein 4189 58.89 0 5042907..5044514 + 535 66047461 - Psyr_4234 - extracellular solute-binding protein 4190 57.15 0 5044772..5046400 + 542 66047462 - Psyr_4235 - extracellular solute-binding protein 4191 58.57 0 5046719..5048311 + 530 66047463 - Psyr_4236 - extracellular solute-binding protein 4192 57.27 0 5048468..5049883 + 471 66047464 - Psyr_4237 - outer membrane porin 4193 55.45 0 5049950..5051545 + 531 66047465 - Psyr_4238 - extracellular solute-binding protein 4194 59.64 0 5051620..5052630 + 336 66047466 - Psyr_4239 - binding-protein dependent transport system inner membrane protein 4195 63.05 0 5052641..5053552 + 303 66047467 - Psyr_4240 - binding-protein dependent transport system inner membrane protein 4196 62.75 0 5053563..5054531 + 322 66047468 - Psyr_4241 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 4197 62.46 0 5054531..5055505 + 324 66047469 dppF Psyr_4242 - dipeptide transporter ATP-binding subunit 4198 61.71 0 5055641..5058163 - 840 66047470 - Psyr_4243 - oxidoreductase FAD/NAD(P)-binding:PepSY-associated TM helix:flavodoxin/nitric oxide synthase 4199 50.44 -2 5058505..5059749 + 414 66047471 - Psyr_4244 - hypothetical protein 4200 55.26 0 5059742..5060749 + 335 66047472 - Psyr_4245 - hypothetical protein 4201 57.41 0 5060863..5061672 + 269 66047473 - Psyr_4246 - hypothetical protein 4202 56.19 0 5061734..5062897 - 387 66047474 - Psyr_4247 - ornithine decarboxylase 4203 54.67 -1 5063393..5065867 + 824 66047475 - Psyr_4248 - hypothetical protein 4204 60.41 0 5066557..5067723 - 388 66047476 - Psyr_4249 - glycine betaine/L-proline transport ATP-binding subunit 4205 61.93 0 5067720..5068373 - 217 66047477 - Psyr_4250 - binding-protein dependent transport system inner membrane protein 4206 56.82 0 5068387..5069280 - 297 66047478 - Psyr_4251 - substrate-binding region of ABC-type glycine betaine transport system 4207 60.50 0 5069295..5070008 - 237 66047479 - Psyr_4252 - binding-protein dependent transport system inner membrane protein 4208 60.16 0 5070353..5071936 + 527 66047480 prfC Psyr_4253 - peptide chain release factor 3 4209 55.56 0 5072562..5072804 + 80 66047481 - Psyr_4254 - hypothetical protein 4210 62.30 0 5072884..5073501 - 205 66047482 - Psyr_4255 - FKBP-type peptidyl-prolyl isomerase, N-terminal:peptidylprolyl isomerase, FKBP-type 4211 56.96 0 5073656..5073964 - 102 66047483 - Psyr_4256 - hypothetical protein 4212 51.33 -1 5074073..5074561 - 162 66047484 - Psyr_4257 - hypothetical protein 4213 55.76 0 5074682..5075011 - 109 66047485 - Psyr_4258 - hypothetical protein 4214 62.03 0 5075180..5077615 - 811 66047486 - Psyr_4259 - ATP-dependent protease, putative 4215 57.67 0 5077892..5078380 + 162 66047487 - Psyr_4260 - hypothetical protein 4216 61.00 0 5078443..5080296 + 617 66047488 - Psyr_4261 - hypothetical protein 4217 61.02 0 5080430..5080783 + 117 66047489 - Psyr_4262 - putative lipoprotein 4218 62.05 0 5080858..5081355 + 165 66047490 - Psyr_4263 - transcription elongation factor GreA/GreB 4219 60.00 0 5081416..5083080 - 554 66047491 - Psyr_4264 - putative ABC transporter ATP-binding protein 4220 61.95 0 5083463..5087299 + 1278 66047492 - Psyr_4265 - PAS:GGDEF 4221 61.43 0 5087439..5088431 + 330 66047493 - Psyr_4266 - regulatory protein, LuxR 4222 62.08 0 5088571..5089464 + 297 66047494 - Psyr_4267 - hypothetical protein 4223 65.98 +1 5089512..5090963 + 483 66047495 - Psyr_4268 - amidase 4224 61.86 0 5091033..5093777 - 914 66047496 - Psyr_4269 - type III effector HopAE1 4225 62.20 0 5094122..5095375 + 417 66047497 glyA Psyr_4270 - serine hydroxymethyltransferase 4226 61.66 0 5095480..5096457 - 325 66047498 - Psyr_4271 - cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K 4227 59.60 0 5096553..5096750 - 65 66047499 - Psyr_4272 - hypothetical protein 4228 61.56 0 5096778..5098853 - 691 66047500 - Psyr_4273 - carbon starvation protein CstA 4229 57.72 0 5099138..5099506 + 122 66047501 - Psyr_4274 - hypothetical protein 4230 64.11 +1 5099513..5100880 - 455 66047502 - Psyr_4275 - DNA repair protein RadA 4231 58.17 0 5101077..5101523 + 148 66047503 mscL Psyr_4276 - large-conductance mechanosensitive channel 4232 58.04 0 5101714..5102490 - 258 66047504 - Psyr_4277 - oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region 4233 51.71 -1 5102827..5103060 + 77 66047505 - Psyr_4278 - regulatory protein, LuxR 4234 63.91 +1 5103190..5104314 + 374 66047506 - Psyr_4279 - rRNA (guanine-N(2)-)-methyltransferase 4235 60.12 0 5104406..5104573 - 55 66047507 - Psyr_4280 - hypothetical protein 4236 59.82 0 5104595..5105602 - 335 66047508 - Psyr_4281 - cytochrome bd ubiquinol oxidase, subunit II 4237 59.79 0 5105606..5107045 - 479 66047509 - Psyr_4282 - cytochrome bd ubiquinol oxidase, subunit I 4238 61.94 0 5107520..5109721 - 733 66047510 - Psyr_4283 - aldehyde oxidase and xanthine dehydrogenase 4239 61.82 0 5109718..5110707 - 329 66047511 - Psyr_4284 - molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal 4240 61.96 0 5110704..5111234 - 176 66047512 - Psyr_4285 - ferredoxin:[2Fe-2S]-binding 4241 62.11 0 5111500..5112795 + 431 66047513 - Psyr_4286 - xanthine/uracil/vitamin C permease 4242 63.90 +1 5112792..5113877 + 361 66047514 - Psyr_4287 - tRNA (uracil-5-)-methyltransferase 4243 63.44 0 5114376..5115677 + 433 66047515 - Psyr_4288 - hypothetical protein 4244 61.28 0 5115850..5116740 + 296 66047516 - Psyr_4289 - hypothetical protein 4245 61.52 0 5116745..5117734 + 329 66047517 - Psyr_4290 - hypothetical protein 4246 56.28 0 5117796..5118161 + 121 66047518 - Psyr_4291 - hypothetical protein 4247 61.59 0 5119039..5119629 - 196 66047519 - Psyr_4292 - HAD family hydrolase 4248 61.38 0 5119626..5120495 - 289 66047520 - Psyr_4293 - Acyl-CoA thioesterase 4249 61.75 0 5120635..5121204 - 189 66047521 - Psyr_4294 - histone deacetylase family protein 4250 61.66 0 5121325..5122242 + 305 66047522 - Psyr_4295 - histone deacetylase superfamily protein 4251 63.76 +1 5122313..5123587 + 424 66047523 - Psyr_4296 - hypothetical protein 4252 62.15 0 5123836..5125164 - 442 66047524 - Psyr_4297 - helicase, C-terminal:DEAD/DEAH box helicase, N-terminal 4253 63.83 +1 5125227..5126141 - 304 66047525 - Psyr_4298 - hypothetical protein 4254 58.33 0 5126309..5126776 + 155 66047526 - Psyr_4299 - helix-turn-helix, Fis-type 4255 62.60 0 5126781..5127395 - 204 66047527 - Psyr_4300 - DNA polymerase III, epsilon subunit 4256 58.91 0 5127414..5127890 - 158 66047528 - Psyr_4301 - hypothetical protein 4257 62.13 0 5128171..5128875 - 234 66047529 - Psyr_4302 - hypothetical protein 4258 58.82 0 5129073..5129735 + 220 66047530 - Psyr_4303 - hypothetical protein 4259 61.42 0 5129769..5130911 + 380 66047531 - Psyr_4304 - endonuclease/exonuclease/phosphatase 4260 46.18 -2 5131096..5131344 + 82 66047532 - Psyr_4305 - hypothetical protein 4261 50.00 -2 5131449..5131646 - 65 66047533 - Psyr_4306 - hypothetical protein 4262 46.37 -2 5132214..5133149 - 311 66047534 - Psyr_4307 - hypothetical protein 4263 59.54 0 5133734..5135290 - 518 66047535 - Psyr_4308 - hypothetical protein 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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