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Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3868 60.50 0 4656319..4657647 + 442 66047140 - Psyr_3913 - helix-turn-helix, Fis-type 3869 59.72 0 4657867..4658514 - 215 66047141 - Psyr_3914 - DSBA oxidoreductase 3870 60.73 0 4658582..4659574 - 330 66047142 - Psyr_3915 - Alpha/beta hydrolase fold 3871 59.15 0 4659698..4660495 - 265 66047143 - Psyr_3916 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 3872 62.20 0 4660539..4661456 + 305 66047144 - Psyr_3917 - regulatory protein, LysR:LysR, substrate-binding 3873 63.75 +1 4661497..4661907 - 136 66047145 - Psyr_3918 - NUDIX hydrolase 3874 59.89 0 4661904..4662995 - 363 66047146 ddl Psyr_3919 - D-alanyl-alanine synthetase A 3875 58.87 0 4663147..4663428 - 93 66047147 rpmE2 Psyr_3920 - 50S ribosomal protein L31 type B 3876 60.04 0 4663723..4664853 + 376 66047148 - Psyr_3921 - hypothetical protein 3877 44.29 -2 4664964..4665629 + 221 66047149 - Psyr_3922 - hypothetical protein 3878 49.04 -2 4665676..4666611 - 311 66047150 - Psyr_3923 - hypothetical protein 3879 48.88 -2 4666828..4667541 + 237 66047151 - Psyr_3924 - hypothetical protein 3880 62.01 0 4667696..4670833 + 1045 66047152 - Psyr_3925 - hypothetical protein 3881 61.76 0 4670921..4671511 + 196 66047153 - Psyr_3926 - transcriptional regulator PadR-like 3882 62.37 0 4671508..4672275 + 255 66047154 - Psyr_3927 - siderophore-interacting protein 3883 59.39 0 4672291..4672950 - 219 66047155 - Psyr_3928 - hypothetical protein 3884 56.96 0 4673004..4673312 - 102 66047156 - Psyr_3929 - hypothetical protein 3885 62.29 0 4673672..4676095 + 807 66047157 - Psyr_3930 - quinoprotein 3886 63.49 0 4676822..4678018 - 398 66047158 - Psyr_3931 - hypothetical protein 3887 62.50 0 4678015..4679022 - 335 66047159 - Psyr_3932 - cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K 3888 60.67 0 4679019..4679318 - 99 66047160 - Psyr_3933 - hypothetical protein 3889 64.27 +1 4679341..4680090 - 249 66047161 - Psyr_3934 - Short-chain dehydrogenase/reductase SDR 3890 65.49 +1 4680215..4680976 - 253 66047162 - Psyr_3935 - Short-chain dehydrogenase/reductase SDR 3891 61.37 0 4680987..4682327 - 446 66047163 - Psyr_3936 - major facilitator transporter 3892 57.37 0 4682355..4683236 - 293 66047164 - Psyr_3937 - polysaccharide deacetylase 3893 65.79 +1 4683313..4684686 - 457 66047165 - Psyr_3938 - hypothetical protein 3894 61.67 0 4684947..4686026 + 359 66047166 - Psyr_3939 - regulatory protein, GntR 3895 62.00 0 4686916..4687344 - 142 66047167 - Psyr_3940 - hypothetical protein 3896 61.53 0 4687344..4688219 - 291 66047168 - Psyr_3941 - hypothetical protein 3897 59.79 0 4688223..4690577 - 784 66047169 - Psyr_3942 - GGDEF 3898 60.59 0 4690574..4691248 - 224 66047170 - Psyr_3943 - hypothetical protein 3899 60.59 0 4691427..4693844 + 805 66047171 - Psyr_3944 - peptidase S16, ATP-dependent protease La 3900 63.87 +1 4694046..4694438 + 130 66047172 - Psyr_3945 - hypothetical protein 3901 59.68 0 4694539..4695282 + 247 66047173 - Psyr_3946 - methyltransferase 3902 62.40 0 4695279..4696238 + 319 66047174 - Psyr_3947 - methyltransferase, putative 3903 63.83 +1 4696247..4696987 - 246 66047175 - Psyr_3948 - pyridoxal phosphate biosynthetic protein PdxJ 3904 63.89 +1 4697047..4697730 - 227 66047176 recO Psyr_3949 - DNA repair protein RecO 3905 59.69 0 4697791..4698693 - 300 66047177 era Psyr_3950 - GTP-binding protein Era 3906 61.16 0 4698686..4699375 - 229 66047178 rnc Psyr_3951 - ribonuclease III 3907 50.26 -2 4699372..4699749 - 125 66047179 - Psyr_3952 - hypothetical protein 3908 57.66 0 4699864..4700718 - 284 66047180 - Psyr_3953 - Signal peptidase I 3909 58.21 0 4700728..4702524 - 598 66047181 - Psyr_3954 - GTP-binding protein LepA 3910 60.58 0 4702696..4704141 - 481 66047182 - Psyr_3955 - peptidase S1, chymotrypsin:PDZ/DHR/GLGF 3911 56.88 0 4704426..4705385 - 319 66047183 - Psyr_3956 - MucB/RseB 3912 59.90 0 4705394..4705984 - 196 66047184 - Psyr_3957 - anti sigma-E protein RseA, N-terminal:anti sigma-E protein RseA, C-terminal 3913 54.30 -1 4706018..4706599 - 193 66047185 algU Psyr_3958 - RNA polymerase sigma factor AlgU 3914 60.85 0 4707097..4708713 + 538 66047186 - Psyr_3959 - L-aspartate oxidase 3915 59.57 0 4708682..4709146 - 154 66047187 - Psyr_3960 - hypothetical protein 3916 56.08 0 4709130..4709384 - 84 66047188 - Psyr_3961 - hypothetical protein 3917 59.70 0 4709531..4710478 + 315 66047189 - Psyr_3962 - glycine cleavage T protein (aminomethyl transferase) 3918 57.42 0 4710590..4711411 + 273 66047190 - Psyr_3963 - hypothetical protein 3919 64.43 +1 4711422..4712804 - 460 66047191 - Psyr_3964 - sensor histidine kinase 3920 60.86 0 4712797..4713468 - 223 66047192 - Psyr_3965 - response regulator receiver:transcriptional regulatory protein, C-terminal 3921 61.86 0 4713938..4714915 + 325 66047193 - Psyr_3966 - hypothetical protein 3922 60.78 0 4714978..4715436 + 152 66047194 - Psyr_3967 - membrane protein TctB, putative 3923 62.71 0 4715438..4716952 + 504 66047195 - Psyr_3968 - hypothetical protein 3924 64.35 +1 4716945..4717979 + 344 66047196 - Psyr_3969 - putative ammonia monooxygenase 3925 58.87 0 4718010..4718702 - 230 66047197 - Psyr_3970 - uracil-DNA glycosylase 3926 62.21 0 4718911..4719381 - 156 66047198 - Psyr_3971 - putative lipoprotein 3927 59.46 0 4719943..4721010 + 355 66047199 - Psyr_3972 - ABC transporter, periplasmic substrate-binding protein 3928 64.09 +1 4721038..4721853 + 271 66047200 - Psyr_3973 - binding-protein dependent transport system inner membrane protein 3929 64.75 +1 4721850..4722632 + 260 66047201 - Psyr_3974 - ABC transporter 3930 61.57 0 4722629..4723354 + 241 66047202 - Psyr_3975 - hypothetical protein 3931 61.49 0 4723366..4723983 + 205 66047203 - Psyr_3976 - hypothetical protein 3932 62.75 0 4724093..4728559 + 1488 66047204 - Psyr_3977 - Urea amidolyase-related protein 3933 65.29 +1 4728595..4730409 + 604 66047205 - Psyr_3978 - amidase 3934 60.55 0 4730539..4733874 + 1111 66047206 - Psyr_3979 - hypothetical protein 3935 64.98 +1 4733916..4734152 + 78 66047207 - Psyr_3980 - hypothetical protein 3936 60.61 0 4734188..4734880 + 230 66047208 - Psyr_3981 - pseudouridine synthase, Rsu 3937 57.71 0 4735007..4735888 + 293 66047209 - Psyr_3982 - 3-hydroxyacyl-CoA-acyl carrier protein transferase 3938 55.77 0 4736482..4738839 - 785 66047210 - Psyr_3983 - serralysin 3939 57.48 0 4739638..4742901 - 1087 66047211 - Psyr_3984 - DNA helicase related protein 3940 58.85 0 4743013..4744278 - 421 66047212 - Psyr_3985 - Pectate lyase/Amb allergen 3941 60.85 0 4744397..4744843 - 148 66047213 - Psyr_3986 - GCN5-related N-acetyltransferase 3942 59.53 0 4744868..4746016 - 382 66047214 - Psyr_3987 - Iron-containing alcohol dehydrogenase 3943 57.90 0 4746168..4747388 - 406 66047215 - Psyr_3988 - hypothetical protein 3944 51.27 -1 4747685..4748905 + 406 66047216 - Psyr_3989 - hypothetical protein 3945 53.31 -1 4748908..4749918 + 336 66047217 - Psyr_3990 - hypothetical protein 3946 59.71 0 4749978..4750595 - 205 66047218 - Psyr_3991 - hypothetical protein 3947 61.48 0 4750621..4751334 - 237 66047219 - Psyr_3992 - hypothetical protein 3948 59.28 0 4751671..4753932 + 753 66047220 - Psyr_3993 - glycoside hydrolase family protein 3949 62.86 0 4754002..4755759 + 585 66047221 - Psyr_3994 - sensor histidine kinase 3950 64.19 +1 4755766..4757100 + 444 66047222 - Psyr_3995 - helix-turn-helix, Fis-type 3951 61.27 0 4757326..4759716 + 796 66047223 - Psyr_3996 - PAS 3952 59.71 0 4759883..4761577 + 564 66047224 - Psyr_3997 - heat shock protein Hsp70 3953 59.43 0 4761574..4763121 + 515 66047225 - Psyr_3998 - heat shock protein DnaJ, N-terminal 3954 58.45 0 4763337..4764662 + 441 66047226 - Psyr_3999 - major facilitator transporter 3955 44.31 -2 4764833..4765087 - 84 66047227 - Psyr_4000 - hypothetical protein 3956 61.01 0 4765255..4765572 + 105 66047228 - Psyr_4001 - hypothetical protein 3957 61.22 0 4765718..4766341 + 207 66047229 - Psyr_4002 - hypothetical protein 3958 62.08 0 4766342..4766581 - 79 66047230 - Psyr_4003 - hypothetical protein 3959 62.06 0 4767044..4768540 + 498 66047231 - Psyr_4004 - EmrB/QacA family drug resistance transporter 3960 58.20 0 4768555..4769688 - 377 66047232 - Psyr_4005 - hypothetical protein 3961 57.42 0 4770168..4770827 - 219 66047233 - Psyr_4006 - regulatory protein, TetR 3962 61.15 0 4771083..4772243 + 386 66047234 - Psyr_4007 - secretion protein HlyD 3963 59.55 0 4772247..4775381 + 1044 66047235 - Psyr_4008 - hydrophobe/amphiphile efflux-1 HAE1 3964 63.04 0 4775378..4776838 + 486 66047236 - Psyr_4009 - RND efflux system, outer membrane lipoprotein, NodT 3965 58.99 0 4776902..4778203 - 433 66047237 - Psyr_4010 - citrate-proton symport 3966 64.33 +1 4778415..4779614 - 399 66047238 - Psyr_4011 - beta-ketoadipyl CoA thiolase 3967 62.44 0 4779614..4780393 - 259 66047239 - Psyr_4012 - glutaconate CoA-transferase 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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