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Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3708 60.66 0 4469978..4470310 - 110 66046980 - Psyr_3752 - hypothetical protein 3709 60.45 0 4470616..4471500 - 294 66046981 - Psyr_3753 - short chain dehydrogenase 3710 59.58 0 4471534..4471914 - 126 66046982 - Psyr_3754 - hypothetical protein 3711 54.09 -1 4472228..4472386 + 52 66046983 - Psyr_3755 - hypothetical protein 3712 58.71 0 4472506..4474164 - 552 66046984 actP Psyr_3756 - acetate permease 3713 52.24 -1 4474161..4474472 - 103 66046985 - Psyr_3757 - hypothetical protein 3714 57.78 0 4474707..4475561 - 284 66046986 - Psyr_3758 - substrate-binding region of ABC-type glycine betaine transport system 3715 57.97 0 4476742..4478040 + 432 66046987 - Psyr_3759 - hypothetical protein 3716 60.02 0 4478033..4478845 + 270 66046988 - Psyr_3760 - VacJ-like lipoprotein 3717 59.39 0 4478980..4479570 + 196 66046989 - Psyr_3761 - hypothetical protein 3718 61.60 0 4479774..4480976 + 400 66046990 - Psyr_3762 - major facilitator transporter 3719 58.12 0 4481276..4482352 + 358 66046991 - Psyr_3763 - GGDEF 3720 52.30 -1 4482357..4483226 - 289 66046992 - Psyr_3764 - hypothetical protein 3721 51.26 -1 4483281..4483715 - 144 66046993 - Psyr_3765 - hypothetical protein 3722 57.79 0 4483919..4484650 - 243 66046994 - Psyr_3766 - hypothetical protein 3723 52.96 -1 4484833..4485102 - 89 66046995 - Psyr_3767 - regulatory protein, LuxR 3724 61.50 0 4485561..4486877 - 438 66046996 - Psyr_3768 - major facilitator transporter 3725 61.61 0 4487159..4489333 - 724 66046997 - Psyr_3769 - TonB-dependent siderophore receptor 3726 55.02 -1 4489636..4489944 + 102 66046998 - Psyr_3770 - peptidase 3727 58.33 0 4490038..4491201 - 387 66046999 - Psyr_3771 - hypothetical protein 3728 62.93 0 4491257..4491577 - 106 66047000 - Psyr_3772 - hypothetical protein 3729 60.17 0 4491827..4493011 - 394 66047001 - Psyr_3773 - GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal 3730 61.53 0 4493125..4494312 - 395 66047002 - Psyr_3774 - PAS 3731 56.08 0 4494302..4495123 - 273 66047003 - Psyr_3775 - Alpha/beta hydrolase fold 3732 57.99 0 4495335..4495772 - 145 66047004 - Psyr_3776 - cytosine deaminase 3733 60.48 0 4495804..4496304 - 166 66047005 - Psyr_3777 - hypothetical protein 3734 59.07 0 4496436..4497449 - 337 66047006 - Psyr_3778 - substrate-binding region of ABC-type glycine betaine transport system 3735 63.09 0 4497536..4497982 + 148 66047007 - Psyr_3779 - GCN5-related N-acetyltransferase 3736 60.56 0 4498007..4498546 - 179 66047008 def Psyr_3780 - peptide deformylase 3737 58.18 0 4498597..4499562 - 321 66047009 - Psyr_3781 - ribonuclease BN 3738 53.65 -1 4499786..4499977 - 63 66047010 - Psyr_3782 - CsbD-like 3739 56.69 0 4500190..4500570 + 126 66047011 - Psyr_3783 - hypothetical protein 3740 60.70 0 4500648..4501049 - 133 66047012 - Psyr_3784 - hypothetical protein 3741 58.61 0 4501194..4501826 + 210 66047013 - Psyr_3785 - DSBA oxidoreductase 3742 56.03 0 4501896..4502732 - 278 66047014 - Psyr_3786 - RNA binding S1 3743 57.67 0 4503341..4503907 + 188 66047015 - Psyr_3787 - hypothetical protein 3744 61.59 0 4504052..4504780 + 242 66047016 - Psyr_3788 - hypothetical protein 3745 59.14 0 4504850..4505713 + 287 66047017 - Psyr_3789 - putative lipoprotein 3746 58.42 0 4506322..4506624 - 100 66047018 - Psyr_3790 - hypothetical protein 3747 62.26 0 4506809..4508146 - 445 66047019 - Psyr_3791 - helicase, C-terminal:DEAD/DEAH box helicase, N-terminal 3748 62.91 0 4508297..4509547 - 416 66047020 - Psyr_3792 - sensor histidine kinase 3749 61.59 0 4509544..4510233 - 229 66047021 - Psyr_3793 - response regulator receiver:transcriptional regulatory protein, C-terminal 3750 59.97 0 4510450..4512822 + 790 66047022 - Psyr_3794 - surface antigen (D15):surface antigen variable number 3751 62.80 0 4512941..4513354 + 137 66047023 - Psyr_3795 - hypothetical protein 3752 63.22 0 4513374..4514273 - 299 66047024 - Psyr_3796 - regulatory protein, LysR:LysR, substrate-binding 3753 60.30 0 4514362..4515162 + 266 66047025 - Psyr_3797 - NAD(P)H dehydrogenase (quinone) 3754 56.59 0 4515280..4515795 + 171 66047026 - Psyr_3798 - hypothetical protein 3755 56.66 0 4515853..4516881 - 342 66047027 - Psyr_3799 - hypothetical protein 3756 63.50 0 4516878..4518140 - 420 66047028 - Psyr_3800 - major facilitator transporter 3757 61.41 0 4518247..4519140 + 297 66047029 - Psyr_3801 - regulatory protein, LysR:LysR, substrate-binding 3758 57.59 0 4519156..4520268 - 370 66047030 - Psyr_3802 - hypothetical protein 3759 61.18 0 4520428..4521720 + 430 66047031 - Psyr_3803 - MscS mechanosensitive ion channel 3760 52.89 -1 4522205..4524301 + 698 66047032 - Psyr_3804 - ATP-dependent DNA helicase RecQ 3761 52.63 -1 4524298..4525665 + 455 66047033 - Psyr_3805 - hypothetical protein 3762 41.15 -2 4526331..4526816 + 161 66047034 - Psyr_3806 - hypothetical protein 3763 40.82 -2 4527902..4529116 + 404 66047035 - Psyr_3807 - hypothetical protein 3764 41.67 -2 4529113..4529592 + 159 66047036 - Psyr_3808 - hypothetical protein 3765 42.73 -2 4529589..4531439 + 616 66047037 - Psyr_3809 - hypothetical protein 3766 56.69 0 4531582..4532403 - 273 66047038 - Psyr_3810 - integrase catalytic subunit 3767 57.00 0 4532460..4532759 - 99 66047039 - Psyr_3811 - transposase IS3/IS911 3768 48.89 -2 4533648..4534502 + 284 66047040 - Psyr_3813 - type III effector HopAF1 3769 51.50 -1 4535275..4535808 + 177 66047041 - Psyr_3814 - GCN5-related N-acetyltransferase 3770 56.48 0 4535995..4538115 + 706 66047042 - Psyr_3815 - hypothetical protein 3771 50.80 -2 4538842..4541103 - 753 66047043 - Psyr_3816 - hypothetical protein 3772 53.82 -1 4541179..4542603 - 474 66047044 - Psyr_3817 - hypothetical protein 3773 51.30 -1 4543818..4544201 + 127 66047045 - Psyr_3818 - hypothetical protein 3774 57.29 0 4544258..4544833 - 191 66047046 - Psyr_3819 - hypothetical protein 3775 62.45 0 4545277..4545822 + 181 66047047 - Psyr_3820 - hypothetical protein 3776 61.36 0 4545901..4546635 + 244 66047048 - Psyr_3821 - Short-chain dehydrogenase/reductase SDR 3777 61.89 0 4546637..4547515 - 292 66047049 - Psyr_3822 - hypothetical protein 3778 62.42 0 4547783..4552615 + 1610 66047050 - Psyr_3823 - putative hemolysin-type calcium-binding region 3779 56.83 0 4552802..4553116 - 104 66047051 - Psyr_3824 - hypothetical protein 3780 65.48 +1 4553184..4554107 + 307 66047052 - Psyr_3825 - regulatory protein, LysR:LysR, substrate-binding 3781 57.09 0 4554341..4554904 + 187 66047053 - Psyr_3826 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 3782 60.72 0 4555006..4556838 + 610 66047054 - Psyr_3827 - ABC transporter, transmembrane region:ABC transporter 3783 61.52 0 4557364..4558491 - 375 66047055 - Psyr_3828 - hypothetical protein 3784 58.95 0 4558531..4563426 - 1631 66047056 - Psyr_3829 - leucine-rich repeat-containing protein 3785 60.43 0 4563547..4564668 - 373 66047057 - Psyr_3830 - 3-oxoacyl-(acyl carrier protein) synthase III 3786 62.88 0 4564908..4568819 - 1303 66047058 - Psyr_3831 - ATP-dependent helicase HrpA 3787 49.59 -2 4568993..4569238 + 81 66047059 - Psyr_3832 - prevent-host-death protein 3788 51.20 -1 4569228..4569518 + 96 66047060 - Psyr_3833 - plasmid stabilization system protein 3789 59.46 0 4569836..4571527 - 563 66047061 - Psyr_3834 - acyl-CoA synthetase 3790 43.83 -2 4571596..4571757 - 53 66047062 - Psyr_3835 - hypothetical protein 3791 60.33 0 4571883..4573571 - 562 66047063 - Psyr_3836 - acyl-CoA synthetase 3792 53.47 -1 4573611..4573754 - 47 66047064 - Psyr_3837 - hypothetical protein 3793 58.39 0 4573940..4574410 + 156 66047065 - Psyr_3838 - MaoC-like dehydratase 3794 58.52 0 4574582..4576213 + 543 66047066 - Psyr_3839 - type III effector HopAK1 3795 54.72 -1 4576432..4576590 - 52 66047067 - Psyr_3840 - hypothetical protein 3796 59.36 0 4576691..4577032 - 113 66047068 - Psyr_3841 - hypothetical protein 3797 62.38 0 4577266..4580112 + 948 66047069 - Psyr_3842 - ATP-dependent helicase HepA 3798 59.25 0 4580648..4582939 + 763 66047070 - Psyr_3843 - GGDEF 3799 55.23 0 4583090..4583395 - 101 66047071 - Psyr_3844 - hypothetical protein 3800 59.20 0 4583721..4584845 + 374 66047072 - Psyr_3845 - extracellular ligand-binding receptor 3801 60.06 0 4585073..4585996 + 307 66047073 - Psyr_3846 - inner-membrane translocator 3802 60.66 0 4585993..4587258 + 421 66047074 livM Psyr_3847 - leucine/isoleucine/valine transporter permease subunit 3803 61.46 0 4587255..4588022 + 255 66047075 livG Psyr_3848 - leucine/isoleucine/valine transporter ATP-binding subunit 3804 60.11 0 4588023..4588724 + 233 66047076 - Psyr_3849 - ABC transporter 3805 61.97 0 4588981..4589661 + 226 66047077 - Psyr_3850 - putative lipoprotein 3806 62.83 0 4589759..4591372 + 537 66047078 - Psyr_3851 - hypothetical protein 3807 63.44 0 4591592..4592056 - 154 66047079 - Psyr_3852 - lipoprotein SlyB, putative 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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