version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3137 60.14 0 3808879..3809568 + 229 66046409 aat Psyr_3180 - leucyl/phenylalanyl-tRNA--protein transferase 3138 54.52 -1 3809617..3810324 + 235 66046410 - Psyr_3181 - arginyl-tRNA-protein transferase 3139 54.79 -1 3810426..3810644 + 72 66046411 infA Psyr_3182 - translation initiation factor IF-1 3140 58.66 0 3810762..3813035 - 757 66046412 - Psyr_3183 - putative AAA ATPase 3141 54.55 -1 3813066..3813428 - 120 66046413 clpS Psyr_3184 - ATP-dependent Clp protease adaptor protein ClpS 3142 49.46 -2 3813654..3813932 + 92 66046414 - Psyr_3185 - cold-shock protein, DNA-binding 3143 59.96 0 3814551..3816773 + 740 66046415 - Psyr_3186 - isocitrate dehydrogenase NADP-dependent, monomeric type 3144 57.14 0 3816926..3817807 - 293 66046416 - Psyr_3187 - Alpha/beta hydrolase fold 3145 60.60 0 3818108..3819013 + 301 66046417 - Psyr_3188 - regulatory protein, LysR:LysR, substrate-binding 3146 60.85 0 3819057..3819503 + 148 66046418 - Psyr_3189 - NUDIX hydrolase 3147 60.30 0 3819564..3820694 + 376 66046419 trmU Psyr_3190 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3148 61.84 0 3820694..3821314 + 206 66046420 - Psyr_3191 - hypothetical protein 3149 60.04 0 3821398..3822816 + 472 66046421 - Psyr_3192 - adenylosuccinate lyase 3150 61.35 0 3822877..3824043 + 388 66046422 - Psyr_3193 - transcription factor jumonji, jmjC 3151 58.87 0 3824036..3824458 + 140 66046423 - Psyr_3194 - GCN5-related N-acetyltransferase 3152 59.54 0 3824645..3825388 + 247 66046424 - Psyr_3195 - NolW-like 3153 60.41 0 3825917..3827242 + 441 66046425 - Psyr_3196 - isocitrate lyase 3154 55.80 0 3827706..3828119 + 137 66046426 - Psyr_3197 - NADH dehydrogenase subunit A 3155 57.93 0 3828130..3828804 + 224 66046427 - Psyr_3198 - NADH dehydrogenase subunit B 3156 59.71 0 3828879..3830660 + 593 66046428 - Psyr_3199 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 3157 60.44 0 3830663..3831160 + 165 66046429 - Psyr_3200 - NADH dehydrogenase subunit E 3158 62.40 0 3831157..3832515 + 452 66046430 - Psyr_3201 - NADH dehydrogenase I subunit F 3159 62.25 0 3832652..3835369 + 905 66046431 - Psyr_3202 - NADH dehydrogenase subunit G 3160 57.84 0 3835366..3836373 + 335 66046432 - Psyr_3203 - NADH dehydrogenase subunit H 3161 57.01 0 3836385..3836933 + 182 66046433 - Psyr_3204 - NADH dehydrogenase subunit I 3162 61.18 0 3836944..3837453 + 169 66046434 - Psyr_3205 - NADH dehydrogenase subunit J 3163 59.55 0 3837450..3837758 + 102 66046435 - Psyr_3206 - NADH dehydrogenase subunit K 3164 60.73 0 3837755..3839608 + 617 66046436 - Psyr_3207 - NADH dehydrogenase subunit L 3165 60.80 0 3839648..3841180 + 510 66046437 - Psyr_3208 - NADH dehydrogenase subunit M 3166 60.54 0 3841188..3842657 + 489 66046438 - Psyr_3209 - NADH dehydrogenase subunit N 3167 58.31 0 3842764..3843828 - 354 66046439 - Psyr_3210 - hypothetical protein 3168 60.53 0 3844142..3845461 - 439 66046440 - Psyr_3211 - sensor histidine kinase 3169 58.45 0 3845458..3846126 - 222 66046441 - Psyr_3212 - response regulator receiver:transcriptional regulatory protein, C-terminal 3170 51.46 -1 3846126..3846434 - 102 66046442 - Psyr_3213 - peptidase 3171 53.58 -1 3846434..3846754 - 106 66046443 - Psyr_3214 - peptidase 3172 54.90 -1 3846929..3847285 + 118 66046444 - Psyr_3215 - putative 6-pyruvoyl tetrahydropterin synthase 3173 49.48 -2 3852819..3853109 + 96 66046445 - Psyr_3216 - hypothetical protein 3174 58.78 0 3853334..3854221 + 295 66046446 - Psyr_3217 - hypothetical protein 3175 57.78 0 3854388..3854702 + 104 66046447 - Psyr_3218 - hypothetical protein 3176 61.80 0 3854727..3856535 - 602 66046448 - Psyr_3219 - peptidase M24 3177 62.22 0 3856593..3857783 - 396 66046449 - Psyr_3220 - aminotransferase, class V 3178 57.58 0 3858453..3859574 + 373 66046450 - Psyr_3221 - DegT/DnrJ/EryC1/StrS aminotransferase 3179 60.20 0 3859580..3861094 + 504 66046451 - Psyr_3222 - polysaccharide biosynthesis protein 3180 59.72 0 3861098..3862033 + 311 66046452 - Psyr_3223 - glycosyl transferase family protein 3181 61.59 0 3862023..3862475 + 150 66046453 - Psyr_3224 - low molecular weight phosphotyrosine protein phosphatase 3182 59.51 0 3862476..3864683 + 735 66046454 - Psyr_3225 - protein-tyrosine kinase 3183 59.26 0 3864736..3865248 + 170 66046455 - Psyr_3226 - transcriptional activator RfaH 3184 61.78 0 3865334..3866335 + 333 66046456 - Psyr_3227 - glycosyl transferase family protein 3185 62.19 0 3866332..3867537 + 401 66046457 - Psyr_3228 - glycosyl transferase, group 1 3186 61.74 0 3867642..3868757 + 371 66046458 - Psyr_3229 - glycosyl transferase, group 1 3187 64.07 +1 3868831..3870060 + 409 66046459 - Psyr_3230 - glycosyl transferase, group 1 3188 62.55 0 3870074..3871483 + 469 66046460 - Psyr_3231 - sugar transferase 3189 62.17 0 3871564..3872652 + 362 66046461 - Psyr_3232 - polysaccharide export protein 3190 61.00 0 3872903..3873484 + 193 66046462 - Psyr_3233 - NAD(P)H-dependent FMN reductase 3191 58.29 0 3873504..3874112 - 202 66046463 - Psyr_3234 - lysine exporter protein LysE/YggA 3192 57.09 0 3874237..3874518 - 93 66046464 - Psyr_3235 - putative lipoprotein 3193 62.96 0 3874607..3875497 - 296 66046465 - Psyr_3236 - regulatory protein, LysR:LysR, substrate-binding 3194 60.40 0 3875627..3876328 + 233 66046466 - Psyr_3237 - 3-oxoacid CoA-transferase 3195 60.27 0 3876371..3877027 + 218 66046467 - Psyr_3238 - 3-oxoacid CoA-transferase 3196 63.85 +1 3877262..3878680 + 472 66046468 - Psyr_3239 - Short chain fatty acid transporter 3197 65.70 +1 3879008..3879730 - 240 66046469 - Psyr_3240 - hypothetical protein 3198 63.99 +1 3879840..3880772 - 310 66046470 - Psyr_3241 - 2-hydroxyacid dehydrogenase 3199 60.37 0 3881044..3882186 + 380 66046471 - Psyr_3242 - glycerophosphodiester phosphodiesterase 3200 62.55 0 3882225..3884411 - 728 66046472 - Psyr_3243 - TonB-dependent siderophore receptor 3201 60.57 0 3884704..3886047 + 447 66046473 pssA Psyr_3244 - phosphatidylserine synthase 3202 62.32 0 3886134..3888734 - 866 66046474 ligD Psyr_3245 - ATP-dependent DNA ligase 3203 59.27 0 3888755..3889660 - 301 66046475 - Psyr_3246 - Ku 3204 63.42 0 3890048..3891187 + 379 66046476 - Psyr_3247 - alkanesulfonate monooxygenase 3205 61.43 0 3891187..3892293 + 368 66046477 - Psyr_3248 - helix-turn-helix, Fis-type 3206 65.60 +1 3892551..3893954 - 467 66046478 - Psyr_3249 - hypothetical protein 3207 63.68 +1 3893997..3894566 - 189 66046479 - Psyr_3250 - helix-hairpin-helix DNA-binding motif-containing protein 3208 60.26 0 3894678..3895613 + 311 66046480 - Psyr_3251 - hypothetical protein 3209 63.07 0 3895808..3898726 + 972 66046481 - Psyr_3252 - putative monovalent cation/H+ antiporter subunit A 3210 59.71 0 3898726..3899070 + 114 66046482 - Psyr_3253 - putative monovalent cation/H+ antiporter subunit C 3211 62.10 0 3899067..3900752 + 561 66046483 - Psyr_3254 - putative monovalent cation/H+ antiporter subunit D 3212 61.35 0 3900749..3901237 + 162 66046484 - Psyr_3255 - putative monovalent cation/H+ antiporter subunit E 3213 57.35 0 3901234..3901512 + 92 66046485 - Psyr_3256 - putative monovalent cation/H+ antiporter subunit F 3214 65.35 +1 3901509..3901889 + 126 66046486 - Psyr_3257 - putative monovalent cation/H+ antiporter subunit G 3215 54.70 -1 3901908..3902375 - 155 66046487 - Psyr_3258 - hypothetical protein 3216 52.50 -1 3902819..3903058 + 79 66046488 - Psyr_3259 - hypothetical protein 3217 57.17 0 3903078..3904562 - 494 66046489 - Psyr_3260 - hypothetical protein 3218 63.36 0 3904845..3906449 - 534 66046490 - Psyr_3261 - chemotaxis sensory transducer 3219 60.99 0 3906642..3907046 - 134 66046491 - Psyr_3262 - dnaK suppressor protein, putative 3220 61.40 0 3907349..3908374 - 341 66046492 - Psyr_3263 - inner-membrane translocator 3221 60.14 0 3908422..3909999 - 525 66046493 - Psyr_3264 - ABC transporter 3222 58.12 0 3910069..3911004 - 311 66046494 - Psyr_3265 - periplasmic binding protein/LacI transcriptional regulator 3223 63.82 +1 3911471..3912490 - 339 66046495 - Psyr_3266 - oxidoreductase, N-terminal:oxidoreductase, C-terminal 3224 55.63 0 3912557..3913417 - 286 66046496 - Psyr_3267 - AP endonuclease 3225 60.83 0 3913469..3914479 - 336 66046497 - Psyr_3268 - myo-inositol 2-dehydrogenase 3226 60.84 0 3914548..3916485 - 645 66046498 - Psyr_3269 - pyruvate decarboxylase:pyruvate decarboxylase 3227 61.85 0 3916528..3917358 - 276 66046499 - Psyr_3270 - AP endonuclease 3228 62.67 0 3917394..3918896 - 500 66046500 - Psyr_3271 - methylmalonate-semialdehyde dehydrogenase 3229 62.47 0 3918925..3919734 - 269 66046501 - Psyr_3272 - myo-inositol catabolism IolB 3230 60.49 0 3919748..3920653 - 301 66046502 - Psyr_3273 - AP endonuclease 3231 62.90 0 3920712..3922649 - 645 66046503 - Psyr_3274 - carbohydrate kinase, PfkB 3232 59.61 0 3922978..3923841 + 287 66046504 - Psyr_3275 - helix-turn-helix protein RpiR:sugar isomerase (SIS) 3233 58.16 0 3923853..3924851 - 332 66046505 - Psyr_3276 - hypothetical protein 3234 58.59 0 3924848..3926098 - 416 66046506 - Psyr_3277 - cardiolipin synthase 2 3235 58.14 0 3926095..3926880 - 261 66046507 - Psyr_3278 - endonuclease/exonuclease/phosphatase 3236 59.26 0 3927085..3927624 + 179 66046508 - Psyr_3279 - cytochrome B561 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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