version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2857 56.20 0 3477125..3477487 - 120 66046129 - Psyr_2898 - helix-hairpin-helix DNA-binding motif-containing protein 2858 54.70 -1 3477569..3477802 + 77 66046130 - Psyr_2899 - hypothetical protein 2859 63.16 0 3478563..3479645 + 360 66046131 - Psyr_2900 - phospho-2-dehydro-3-deoxyheptonate aldolase 2860 56.03 0 3479727..3480008 + 93 66046132 - Psyr_2901 - PpiC-type peptidyl-prolyl cis-trans isomerase 2861 59.87 0 3480244..3482112 + 622 66046133 - Psyr_2902 - extracellular solute-binding protein 2862 60.09 0 3482113..3483177 + 354 66046134 - Psyr_2903 - binding-protein dependent transport system inner membrane protein 2863 62.57 0 3483174..3484199 + 341 66046135 - Psyr_2904 - binding-protein dependent transport system inner membrane protein 2864 61.85 0 3484201..3485778 + 525 66046136 - Psyr_2905 - ABC transporter 2865 61.11 0 3485827..3486996 - 389 66046137 - Psyr_2906 - pilus retraction protein PilT 2866 56.88 0 3487120..3487395 + 91 66046138 - Psyr_2907 - PpiC-type peptidyl-prolyl cis-trans isomerase 2867 60.96 0 3487470..3489116 - 548 66046139 - Psyr_2908 - phosphoglucomutase 2868 62.11 0 3489280..3491607 - 775 66046140 - Psyr_2909 - DEAD_2 2869 62.76 0 3491713..3493119 - 468 66046141 - Psyr_2910 - regulatory protein, GntR 2870 60.68 0 3493211..3494713 - 500 66046142 - Psyr_2911 - hypothetical protein 2871 61.49 0 3495306..3496328 - 340 66046143 - Psyr_2912 - zinc-containing alcohol dehydrogenase superfamily protein 2872 63.93 +1 3496639..3497553 + 304 66046144 - Psyr_2913 - regulatory protein, LysR:LysR, substrate-binding 2873 54.55 -1 3497794..3502215 - 1473 66046145 - Psyr_2914 - ATP-dependent DNA helicase RecQ 2874 62.68 0 3503682..3504659 - 325 66046146 - Psyr_2915 - helix-turn-helix, AraC type:ThiJ/PfpI 2875 60.00 0 3504820..3505764 + 314 66046147 - Psyr_2916 - substrate-binding region of ABC-type glycine betaine transport system 2876 63.29 0 3505838..3506725 + 295 66046148 - Psyr_2917 - hypothetical protein 2877 61.44 0 3506769..3507725 + 318 66046149 - Psyr_2918 - 3-hydroxybutyryl-CoA dehydrogenase 2878 58.70 0 3507848..3508324 + 158 66046150 - Psyr_2919 - hypothetical protein 2879 63.33 0 3508566..3509285 + 239 66046151 - Psyr_2920 - transcriptional regulator GntR 2880 66.27 +1 3509282..3510295 + 337 66046152 - Psyr_2921 - ADP-ribosylglycohydrolase 2881 62.52 0 3510456..3511925 + 489 66046153 - Psyr_2922 - permease for cytosine/purines, uracil, thiamine, allantoin 2882 64.62 +1 3511915..3512841 + 308 66046154 - Psyr_2923 - carbohydrate kinase, PfkB 2883 58.49 0 3512951..3514246 - 431 66046155 - Psyr_2924 - hypothetical protein 2884 55.65 0 3514239..3514583 - 114 66046156 - Psyr_2925 - helix-hairpin-helix DNA-binding motif-containing protein 2885 61.36 0 3514660..3515865 - 401 66046157 - Psyr_2926 - major facilitator transporter 2886 61.40 0 3515976..3516602 + 208 66046158 - Psyr_2927 - regulatory protein, TetR 2887 61.11 0 3516682..3518535 + 617 66046159 - Psyr_2928 - ABC transporter, transmembrane region:ABC transporter 2888 60.82 0 3518594..3519466 + 290 66046160 - Psyr_2929 - regulatory protein, LysR:LysR, substrate-binding 2889 55.16 0 3519521..3519946 - 141 66046161 - Psyr_2930 - glyoxalase/bleomycin resistance protein/dioxygenase 2890 60.92 0 3520125..3520994 - 289 66046162 - Psyr_2931 - nickel/cobalt efflux protein RcnA 2891 57.82 0 3521002..3521295 - 97 66046163 - Psyr_2932 - hypothetical protein 2892 55.33 0 3521458..3522039 + 193 66046164 - Psyr_2933 - regulatory protein, TetR 2893 59.96 0 3522097..3523200 + 367 66046165 - Psyr_2934 - NADH:flavin oxidoreductase/NADH oxidase 2894 51.94 -1 3523404..3523790 + 128 66046166 - Psyr_2935 - hypothetical protein 2895 59.51 0 3523852..3524508 + 218 66046167 - Psyr_2936 - hypothetical protein 2896 62.39 0 3524525..3525622 - 365 66046168 - Psyr_2937 - NADH:flavin oxidoreductase/NADH oxidase 2897 61.81 0 3525762..3526646 + 294 66046169 - Psyr_2938 - regulatory protein, LysR:LysR, substrate-binding 2898 59.14 0 3526710..3527666 - 318 66046170 - Psyr_2939 - GGDEF 2899 60.81 0 3527685..3531746 - 1353 66046171 - Psyr_2940 - PAS 2900 58.76 0 3532243..3533115 - 290 66046172 - Psyr_2941 - extracellular solute-binding protein 2901 60.50 0 3533112..3533873 - 253 66046173 - Psyr_2942 - ABC transporter 2902 58.79 0 3533870..3534529 - 219 66046174 - Psyr_2943 - amino acid ABC transporter permease 2903 57.21 0 3534510..3535175 - 221 66046175 - Psyr_2944 - amino acid ABC transporter permease 2904 58.14 0 3535483..3536385 - 300 66046176 - Psyr_2945 - regulatory protein, LysR:LysR, substrate-binding 2905 53.26 -1 3536465..3536725 + 86 66046177 - Psyr_2946 - 4-oxalocrotonate tautomerase 2906 56.50 0 3536743..3537165 + 140 66046178 - Psyr_2947 - hypothetical protein 2907 53.33 -1 3537212..3537856 + 214 66046179 - Psyr_2948 - nitroreductase 2908 52.82 -1 3537942..3538526 + 194 66046180 - Psyr_2949 - hypothetical protein 2909 55.06 -1 3538725..3539672 + 315 66046181 - Psyr_2950 - putative hydrolase signal peptide protein 2910 58.11 0 3539799..3540698 - 299 66046182 - Psyr_2951 - regulatory protein, LysR:LysR, substrate-binding 2911 60.95 0 3540809..3541438 + 209 66046183 - Psyr_2952 - NADP oxidoreductase, coenzyme F420-dependent 2912 58.51 0 3541469..3542302 + 277 66046184 - Psyr_2953 - catalytic LigB subunit of aromatic ring-opening dioxygenase 2913 57.59 0 3542307..3542978 + 223 66046185 - Psyr_2954 - phospholipase/carboxylesterase 2914 55.97 0 3543012..3543413 + 133 66046186 - Psyr_2955 - Surfeit locus 4-related 2915 58.74 0 3543485..3544594 + 369 66046187 - Psyr_2956 - zinc-containing alcohol dehydrogenase superfamily protein 2916 55.56 0 3544623..3545243 + 206 66046188 - Psyr_2957 - glutathione-dependent formaldehyde-activating enzyme 2917 60.60 0 3545617..3547248 + 543 66046189 - Psyr_2958 - extracellular solute-binding protein 2918 61.93 0 3547245..3548195 + 316 66046190 - Psyr_2959 - binding-protein dependent transport system inner membrane protein 2919 65.59 +1 3548200..3549132 + 310 66046191 - Psyr_2960 - binding-protein dependent transport system inner membrane protein 2920 62.10 0 3549129..3550772 + 547 66046192 - Psyr_2961 - ABC transporter 2921 59.34 0 3551017..3551889 + 290 66046193 - Psyr_2962 - extracellular solute-binding protein 2922 61.21 0 3551947..3552624 + 225 66046194 - Psyr_2963 - amino acid ABC transporter permease 2923 57.76 0 3552628..3553278 + 216 66046195 - Psyr_2964 - amino acid ABC transporter permease 2924 60.90 0 3553271..3554068 + 265 66046196 - Psyr_2965 - ABC transporter 2925 58.89 0 3554136..3556064 - 642 66046197 - Psyr_2966 - histidine kinase, HAMP region: chemotaxis sensory transducer 2926 63.04 0 3556381..3557622 + 413 66046198 - Psyr_2967 - secretion protein HlyD 2927 60.65 0 3557635..3560826 + 1063 66046199 - Psyr_2968 - hydrophobe/amphiphile efflux-1 HAE1 2928 65.16 +1 3560826..3562223 + 465 66046200 - Psyr_2969 - RND efflux system, outer membrane lipoprotein, NodT 2929 63.38 0 3562366..3563460 + 364 66046201 - Psyr_2970 - TPR repeat-containing protein 2930 57.02 0 3563947..3564309 + 120 66046202 - Psyr_2971 - transcriptional regulator, putative 2931 61.65 0 3564783..3565340 - 185 66046203 - Psyr_2972 - hypothetical protein 2932 59.00 0 3565492..3566013 + 173 66046204 - Psyr_2973 - glyoxalase I 2933 59.88 0 3566107..3567669 - 520 66046205 - Psyr_2974 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2934 56.21 0 3567794..3568357 - 187 66046206 - Psyr_2975 - Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2935 62.08 0 3568468..3569427 - 319 66046207 - Psyr_2976 - Phage integrase:Phage integrase, N-terminal SAM-like 2936 58.95 0 3569605..3570615 + 336 66046208 - Psyr_2977 - cointegrate resolution protein T 2937 60.55 0 3570625..3571899 - 424 66046209 - Psyr_2978 - PAS 2938 58.57 0 3571992..3573350 - 452 66046210 - Psyr_2979 - glutathione reductase 2939 56.31 0 3573452..3574291 - 279 66046211 - Psyr_2980 - UTP--glucose-1-phosphate uridylyltransferase and type 2940 54.96 -1 3574664..3574945 + 93 66046212 - Psyr_2981 - hypothetical protein 2941 57.06 0 3575001..3575354 - 117 66046213 - Psyr_2982 - hypothetical protein 2942 53.92 -1 3575522..3575827 + 101 66046214 - Psyr_2983 - hypothetical protein 2943 56.28 0 3575842..3576024 + 60 66046215 - Psyr_2984 - hypothetical protein 2944 62.74 0 3576049..3576735 + 228 66046216 - Psyr_2985 - 2OG-Fe(II) oxygenase family protein 2945 61.50 0 3576736..3578553 - 605 66046217 - Psyr_2986 - glycoside hydrolase family protein 2946 59.88 0 3578605..3579414 - 269 66046218 - Psyr_2987 - Cof protein/HAD-superfamily hydrolase 2947 59.75 0 3579407..3580939 - 510 66046219 - Psyr_2988 - glucose-6-phosphate 1-dehydrogenase 2948 61.03 0 3580939..3581913 - 324 66046220 - Psyr_2989 - 6-phosphogluconate dehydrogenase-like protein 2949 51.72 -1 3582226..3582399 + 57 66046221 - Psyr_2990 - hypothetical protein 2950 56.50 0 3582560..3583051 - 163 66046222 - Psyr_2991 - GCN5-related N-acetyltransferase 2951 60.48 0 3583668..3585266 + 532 66046223 glgA Psyr_2992 - glycogen synthase 2952 59.94 0 3585283..3587097 + 604 66046224 - Psyr_2993 - Alpha amylase, catalytic region 2953 60.70 0 3587087..3589165 + 692 66046225 - Psyr_2994 - glycoside hydrolase family protein 2954 60.38 0 3589162..3591945 + 927 66046226 - Psyr_2995 - Alpha amylase, catalytic region 2955 62.19 0 3591963..3592364 + 133 66046227 - Psyr_2996 - hypothetical protein 2956 59.62 0 3592521..3594704 + 727 66046228 - Psyr_2997 - glycoside hydrolase, family alpha amylase catalytic subunit 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0