version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2576 61.96 0 3095877..3096938 + 353 66045848 - Psyr_2612 - syrP protein, putative 2577 58.67 0 3097019..3098719 + 566 66045849 - Psyr_2613 - cyclic peptide transporter 2578 62.54 0 3098777..3114895 + 5372 66045850 - Psyr_2614 - amino acid adenylation 2579 61.80 0 3114892..3131301 + 5469 66045851 - Psyr_2615 - amino acid adenylation 2580 62.69 0 3131727..3172340 + 13537 66045852 - Psyr_2616 - amino acid adenylation 2581 59.07 0 3172404..3173561 + 385 66045853 - Psyr_2617 - secretion protein HlyD 2582 60.35 0 3173564..3175525 + 653 66045854 - Psyr_2618 - ABC transporter 2583 60.97 0 3175740..3177074 - 444 66045855 - Psyr_2619 - diaminobutyrate-2-oxoglutarate transaminase 2584 63.45 0 3177351..3178781 + 476 66045856 - Psyr_2620 - RND efflux system, outer membrane lipoprotein, NodT 2585 65.67 +1 3178778..3179881 + 367 66045857 - Psyr_2621 - secretion protein HlyD 2586 59.80 0 3179878..3182922 + 1014 66045858 - Psyr_2622 - acriflavin resistance protein 2587 58.33 0 3182993..3184252 - 419 66045859 - Psyr_2623 - hypothetical protein 2588 56.09 0 3184308..3184808 - 166 66045860 - Psyr_2624 - putative lipoprotein 2589 56.10 0 3184816..3185553 - 245 66045861 - Psyr_2625 - putative lipoprotein 2590 55.04 -1 3185586..3187133 - 515 66045862 - Psyr_2626 - hypothetical protein 2591 59.89 0 3187123..3188346 - 407 66045863 - Psyr_2627 - hypothetical protein 2592 57.58 0 3188330..3189022 - 230 66045864 - Psyr_2628 - ABC transporter 2593 57.78 0 3189024..3191015 - 663 66045865 - Psyr_2629 - von Willebrand factor, type A 2594 59.48 0 3191012..3192040 - 342 66045866 - Psyr_2630 - hypothetical protein 2595 60.63 0 3192044..3194743 - 899 66045867 - Psyr_2631 - type III effector HopL1 2596 59.01 0 3194740..3197874 - 1044 66045868 - Psyr_2632 - virulence protein SrfB 2597 59.44 0 3197886..3199241 - 451 66045869 - Psyr_2633 - hypothetical protein 2598 57.83 0 3199820..3201448 + 542 66045870 - Psyr_2634 - histidine kinase, HAMP region: chemotaxis sensory transducer 2599 59.97 0 3201692..3202870 + 392 66045871 - Psyr_2635 - hypothetical protein 2600 58.50 0 3202967..3203407 - 146 66045872 - Psyr_2636 - TspO/MBR-related protein 2601 63.42 0 3203776..3205101 + 441 66045873 - Psyr_2637 - FAD dependent oxidoreductase 2602 58.73 0 3205149..3206219 - 356 66045874 - Psyr_2638 - hypothetical protein 2603 55.48 0 3206701..3207165 + 154 66045875 - Psyr_2639 - hypothetical protein 2604 52.35 -1 3207940..3208386 + 148 66045876 - Psyr_2640 - NUDIX hydrolase 2605 45.34 -2 3209021..3209428 - 135 66045877 - Psyr_2641 - hypothetical protein 2606 49.15 -2 3209425..3210069 - 214 66045878 - Psyr_2642 - hypothetical protein 2607 53.09 -1 3210976..3212205 - 409 66045879 - Psyr_2643 - hypothetical protein 2608 50.67 -2 3212729..3214660 + 643 66045880 - Psyr_2644 - hypothetical protein 2609 54.50 -1 3215082..3215459 - 125 66045881 - Psyr_2645 - hypothetical protein 2610 55.89 0 3216092..3218263 + 723 66045882 - Psyr_2646 - radical SAM family protein 2611 54.76 -1 3218352..3219233 + 293 66045883 - Psyr_2647 - hypothetical protein 2612 54.69 -1 3219218..3220411 + 397 66045884 - Psyr_2648 - hypothetical protein 2613 53.35 -1 3220493..3221476 + 327 66045885 - Psyr_2649 - hypothetical protein 2614 52.56 -1 3221945..3222412 + 155 66045886 - Psyr_2650 - hypothetical protein 2615 52.60 -1 3222424..3223383 + 319 66045887 - Psyr_2651 - hypothetical protein 2616 56.15 0 3223370..3224044 + 224 66045888 - Psyr_2652 - hypothetical protein 2617 53.49 -1 3224311..3224826 + 171 66045889 - Psyr_2653 - ISPsy8, transposase OrfA 2618 53.90 -1 3224856..3225662 + 268 66045890 - Psyr_2654 - integrase catalytic subunit 2619 60.58 0 3225794..3226615 + 273 66045891 - Psyr_2655 - nitroreductase 2620 53.85 -1 3226787..3227137 - 116 66045892 - Psyr_2656 - hypothetical protein 2621 53.45 -1 3227281..3228120 + 279 66045893 - Psyr_2657 - hypothetical protein 2622 49.74 -2 3228318..3229451 - 377 66045894 - Psyr_2658 - hypothetical protein 2623 51.56 -1 3230030..3231307 - 425 66045895 - Psyr_2659 - hypothetical protein 2624 50.35 -2 3231461..3231742 - 93 66045896 - Psyr_2660 - hypothetical protein 2625 53.87 -1 3231832..3232917 - 361 66045897 - Psyr_2661 - hypothetical protein 2626 52.43 -1 3232976..3233530 + 184 66045898 - Psyr_2662 - hypothetical protein 2627 53.06 -1 3233912..3234271 - 119 66045899 - Psyr_2663 - hypothetical protein 2628 52.92 -1 3234416..3235135 - 239 66045900 - Psyr_2664 - hypothetical protein 2629 50.49 -2 3235541..3236047 + 168 66045901 - Psyr_2665 - phenazine biosynthesis PhzC/PhzF protein 2630 51.70 -1 3236226..3236753 - 175 66045902 - Psyr_2666 - NUDIX hydrolase 2631 61.95 0 3236917..3239802 - 961 66045903 - Psyr_2667 - transposase Tn3 2632 60.65 0 3239928..3240542 + 204 66045904 - Psyr_2668 - helix-turn-helix, Fis-type 2633 56.22 0 3240608..3241411 + 267 66045905 - Psyr_2669 - aminoglycoside phosphotransferase 2634 56.08 0 3241417..3242247 + 276 66045906 - Psyr_2670 - aminoglycoside/hydroxyurea antibiotic resistance kinase 2635 56.48 0 3242289..3243230 - 313 66045907 - Psyr_2671 - regulatory protein, LysR:LysR, substrate-binding 2636 60.17 0 3243314..3244606 + 430 66045908 - Psyr_2672 - citrate transporter 2637 61.68 0 3244607..3245971 + 454 66045909 - Psyr_2673 - hypothetical protein 2638 60.61 0 3245968..3246330 + 120 66045910 - Psyr_2674 - hypothetical protein 2639 64.09 +1 3246619..3247356 + 245 66045911 - Psyr_2675 - transcriptional regulator GntR 2640 63.32 0 3247353..3248369 + 338 66045912 - Psyr_2676 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 2641 62.96 0 3248366..3249499 + 377 66045913 - Psyr_2677 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 2642 59.02 0 3249496..3250998 + 500 66045914 - Psyr_2678 - extracellular solute-binding protein 2643 61.27 0 3251027..3251971 + 314 66045915 - Psyr_2679 - binding-protein dependent transport system inner membrane protein 2644 61.86 0 3251971..3252843 + 290 66045916 - Psyr_2680 - binding-protein dependent transport system inner membrane protein 2645 62.97 0 3252821..3254470 + 549 66045917 - Psyr_2681 - gamma-glutamyltransferase 2646 53.73 -1 3254528..3256699 - 723 66045918 - Psyr_2682 - histidine kinase, HAMP region: chemotaxis sensory transducer 2647 53.64 -1 3257181..3258608 + 475 66045919 - Psyr_2683 - arginine/ornithine antiporter 2648 56.56 0 3258644..3259900 + 418 66045920 - Psyr_2684 - arginine deiminase 2649 55.69 0 3259968..3260978 + 336 66045921 - Psyr_2685 - ornithine carbamoyltransferase 2650 58.06 0 3261073..3262002 + 309 66045922 - Psyr_2686 - carbamate kinase 2651 60.57 0 3262145..3263539 - 464 66045923 - Psyr_2687 - PepSY-associated TM helix 2652 58.64 0 3263648..3264058 - 136 66045924 - Psyr_2688 - hypothetical protein 2653 60.49 0 3265023..3266171 + 382 66045925 - Psyr_2689 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2654 60.55 0 3266168..3267181 + 337 66045926 - Psyr_2690 - glycosyl transferase family protein 2655 59.65 0 3267178..3269172 + 664 66045927 - Psyr_2691 - bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2656 63.61 +1 3269172..3270053 + 293 66045928 - Psyr_2692 - polysaccharide deacetylase 2657 61.04 0 3270050..3271702 + 550 66045929 arnT Psyr_2693 - 4-amino-4-deoxy-L-arabinose transferase 2658 62.08 0 3271711..3272037 + 108 66045930 - Psyr_2694 - hypothetical protein 2659 60.46 0 3272034..3272468 + 144 66045931 - Psyr_2695 - hypothetical protein 2660 60.57 0 3272446..3273840 + 464 66045932 - Psyr_2696 - UDP-glucose 6-dehydrogenase 2661 59.85 0 3273861..3275342 - 493 66045933 - Psyr_2697 - glycosyl transferase family protein 2662 51.12 -1 3275756..3278167 + 803 66045934 - Psyr_2698 - Ricin B lectin 2663 60.00 0 3278314..3279333 - 339 66045935 - Psyr_2699 - hypothetical protein 2664 56.01 0 3279755..3281359 - 534 66045936 - Psyr_2700 - histidine kinase 2665 58.36 0 3281504..3282646 - 380 66045937 - Psyr_2701 - hypothetical protein 2666 54.57 -1 3282649..3283830 - 393 66045938 - Psyr_2702 - UDP-galactopyranose mutase 2667 56.46 0 3283818..3285002 - 394 66045939 - Psyr_2703 - hypothetical protein 2668 59.09 0 3285422..3286450 + 342 66045940 - Psyr_2704 - UDP-glucose 4-epimerase 2669 58.50 0 3286524..3287135 - 203 66045941 - Psyr_2705 - helix-hairpin-helix DNA-binding motif-containing protein 2670 64.67 +1 3287200..3287949 - 249 66045942 - Psyr_2706 - glutamine amidotransferase 2671 64.64 +1 3288077..3288964 + 295 66045943 - Psyr_2707 - regulatory protein, LysR:LysR, substrate-binding 2672 61.50 0 3289110..3290174 + 354 66045944 - Psyr_2708 - Rieske [2Fe-2S] region 2673 61.20 0 3290248..3291198 + 316 66045945 - Psyr_2709 - ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region 2674 64.28 +1 3291199..3291909 - 236 66045946 - Psyr_2710 - transcriptional regulator GntR 2675 58.60 0 3291984..3293954 - 656 66045947 - Psyr_2711 - GGDEF 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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