version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2505 63.71 +1 2956344..2957357 + 337 66045777 - Psyr_2541 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 2506 60.73 0 2957409..2958974 + 521 66045778 - Psyr_2542 - extracellular solute-binding protein 2507 63.45 0 2959044..2959571 + 175 66045779 - Psyr_2543 - hypothetical protein 2508 60.54 0 2959571..2960158 + 195 66045780 - Psyr_2544 - alkylhydroperoxidase AhpD core 2509 60.15 0 2960263..2961060 + 265 66045781 - Psyr_2545 - metallophosphoesterase 2510 53.33 -1 2961089..2961448 - 119 66045782 - Psyr_2546 - DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump 2511 58.79 0 2961449..2962642 - 397 66045783 - Psyr_2547 - Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 2512 42.59 -2 2962772..2963041 - 89 66045784 - Psyr_2548 - hypothetical protein 2513 60.32 0 2963117..2964187 + 356 66045785 - Psyr_2549 - hypothetical protein 2514 60.54 0 2964184..2964738 + 184 66045786 - Psyr_2550 - hypothetical protein 2515 64.20 +1 2964735..2965991 + 418 66045787 - Psyr_2551 - aminotransferase class-III 2516 60.47 0 2966004..2966471 + 155 66045788 - Psyr_2552 - cyclase/dehydrase 2517 61.89 0 2966473..2967582 + 369 66045789 - Psyr_2553 - dehydrogenase domain-containing protein 2518 61.36 0 2967617..2968633 + 338 66045790 - Psyr_2554 - Fatty acid desaturase 2519 58.87 0 2968638..2969150 + 170 66045791 - Psyr_2555 - (dCTP deaminase), deoxycytidine triphosphate deaminase 2520 57.48 0 2969153..2969827 + 224 66045792 dcd Psyr_2556 - deoxycytidine triphosphate deaminase 2521 61.50 0 2969817..2971712 + 631 66045793 - Psyr_2557 - phosphoenolpyruvate synthase/pyruvate phosphate dikinase 2522 58.02 0 2971709..2972887 + 392 66045794 - Psyr_2558 - hypothetical protein 2523 61.74 0 2972912..2974048 + 378 66045795 - Psyr_2559 - hypothetical protein 2524 62.75 0 2974045..2975091 + 348 66045796 - Psyr_2560 - hypothetical protein 2525 59.01 0 2975104..2975691 + 195 66045797 - Psyr_2561 - hypothetical protein 2526 62.50 0 2975688..2977271 + 527 66045798 - Psyr_2562 - hypothetical protein 2527 60.28 0 2977310..2978107 + 265 66045799 - Psyr_2563 - HAD family hydrolase 2528 58.16 0 2978136..2978876 + 246 66045800 - Psyr_2564 - transcriptional regulator GntR 2529 63.95 +1 2978988..2979650 - 220 66045801 - Psyr_2565 - Dak phosphatase 2530 61.78 0 2979654..2980655 - 333 66045802 - Psyr_2566 - Glycerone kinase 2531 60.93 0 2980696..2981811 - 371 66045803 - Psyr_2567 - zinc-containing alcohol dehydrogenase superfamily protein 2532 64.42 +1 2981841..2982596 - 251 66045804 - Psyr_2568 - short chain dehydrogenase 2533 59.55 0 2982805..2983815 - 336 66045805 - Psyr_2569 - periplasmic binding protein/LacI transcriptional regulator 2534 60.63 0 2983859..2984836 - 325 66045806 - Psyr_2570 - inner-membrane translocator 2535 61.42 0 2984833..2986320 - 495 66045807 - Psyr_2571 - ABC transporter 2536 59.52 0 2986599..2987060 + 153 66045808 - Psyr_2572 - ribose/galactose isomerase 2537 60.95 0 2987095..2988108 + 337 66045809 - Psyr_2573 - putative sugar-binding region 2538 60.44 0 2988178..2990553 + 791 66045810 - Psyr_2574 - quinoprotein 2539 60.98 0 2990641..2991414 - 257 66045811 - Psyr_2575 - regulatory protein, LuxR 2540 63.08 0 2991703..3001200 + 3165 66045812 - Psyr_2576 - amino acid adenylation 2541 63.05 0 3001197..3018977 + 5926 66045813 - Psyr_2577 - amino acid adenylation 2542 54.92 -1 3019095..3019775 - 226 66045814 - Psyr_2578 - regulatory protein, LuxR 2543 62.07 0 3020119..3021555 - 478 66045815 - Psyr_2579 - aldehyde dehydrogenase 2544 60.00 0 3022000..3022509 + 169 66045816 - Psyr_2580 - sigma-70 region 2 2545 63.66 +1 3022506..3023471 + 321 66045817 - Psyr_2581 - FecR protein 2546 60.94 0 3023541..3025949 + 802 66045818 - Psyr_2582 - TonB-dependent siderophore receptor 2547 59.48 0 3026300..3027676 + 458 66045819 - Psyr_2583 - diaminobutyrate--2-oxoglutarate aminotransferase 2548 61.57 0 3027873..3029657 + 594 66045820 - Psyr_2584 - IucA/IucC 2549 61.12 0 3029650..3030858 + 402 66045821 - Psyr_2585 - Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 2550 65.17 +1 3030855..3032261 + 468 66045822 - Psyr_2586 - EmrB/QacA family drug resistance transporter 2551 61.18 0 3032283..3034142 + 619 66045823 - Psyr_2587 - IucA/IucC 2552 63.58 +1 3034139..3034915 + 258 66045824 - Psyr_2588 - HpcH/HpaI aldolase 2553 59.71 0 3034919..3036802 + 627 66045825 - Psyr_2589 - IucA/IucC 2554 63.36 0 3036792..3037697 + 301 66045826 - Psyr_2590 - periplasmic binding protein 2555 64.34 +1 3037694..3038683 + 329 66045827 - Psyr_2591 - transport system permease protein 2556 63.76 +1 3038676..3039707 + 343 66045828 - Psyr_2592 - transport system permease protein 2557 61.24 0 3039718..3040509 + 263 66045829 - Psyr_2593 - ABC transporter 2558 60.51 0 3040506..3041285 + 259 66045830 - Psyr_2594 - hypothetical protein 2559 59.22 0 3041282..3041926 + 214 66045831 - Psyr_2595 - dimethylmenaquinone methyltransferase 2560 56.24 0 3042083..3043444 + 453 66045832 - Psyr_2596 - PAS 2561 57.32 0 3043718..3045322 + 534 66045833 - Psyr_2597 - GGDEF 2562 58.12 0 3045628..3051465 + 1945 66045834 - Psyr_2598 - putative DNA helicase 2563 59.07 0 3051490..3052608 - 372 66045835 - Psyr_2599 - metallophosphoesterase 2564 60.78 0 3052805..3053161 + 118 66045836 - Psyr_2600 - hypothetical protein 2565 57.08 0 3053694..3054548 - 284 66045837 - Psyr_2601 - regulatory protein, LuxR 2566 53.04 -1 3055600..3056406 - 268 66045838 - Psyr_2602 - regulatory protein, LuxR 2567 56.15 0 3057159..3058328 + 389 66045839 - Psyr_2603 - secretion protein HlyD 2568 51.32 -1 3058574..3059179 + 201 66045840 - Psyr_2604 - hypothetical protein 2569 57.83 0 3059276..3059773 + 165 66045841 - Psyr_2605 - transposase, putative 2570 60.06 0 3060225..3061661 - 478 66045842 - Psyr_2606 - RND efflux system, outer membrane lipoprotein, NodT 2571 55.11 -1 3061640..3062470 - 276 66045843 - Psyr_2607 - regulatory protein, LuxR 2572 61.96 0 3062695..3091191 - 9498 66045844 - Psyr_2608 - amino acid adenylation 2573 60.31 0 3091468..3092679 - 403 66045845 - Psyr_2609 - Alpha/beta hydrolase fold 2574 56.16 0 3092751..3093683 - 310 66045846 - Psyr_2610 - chlorinating enzyme 2575 62.06 0 3093701..3095545 - 614 66045847 - Psyr_2611 - amino acid adenylation 2576 61.96 0 3095877..3096938 + 353 66045848 - Psyr_2612 - syrP protein, putative 2577 58.67 0 3097019..3098719 + 566 66045849 - Psyr_2613 - cyclic peptide transporter 2578 62.54 0 3098777..3114895 + 5372 66045850 - Psyr_2614 - amino acid adenylation 2579 61.80 0 3114892..3131301 + 5469 66045851 - Psyr_2615 - amino acid adenylation 2580 62.69 0 3131727..3172340 + 13537 66045852 - Psyr_2616 - amino acid adenylation 2581 59.07 0 3172404..3173561 + 385 66045853 - Psyr_2617 - secretion protein HlyD 2582 60.35 0 3173564..3175525 + 653 66045854 - Psyr_2618 - ABC transporter 2583 60.97 0 3175740..3177074 - 444 66045855 - Psyr_2619 - diaminobutyrate-2-oxoglutarate transaminase 2584 63.45 0 3177351..3178781 + 476 66045856 - Psyr_2620 - RND efflux system, outer membrane lipoprotein, NodT 2585 65.67 +1 3178778..3179881 + 367 66045857 - Psyr_2621 - secretion protein HlyD 2586 59.80 0 3179878..3182922 + 1014 66045858 - Psyr_2622 - acriflavin resistance protein 2587 58.33 0 3182993..3184252 - 419 66045859 - Psyr_2623 - hypothetical protein 2588 56.09 0 3184308..3184808 - 166 66045860 - Psyr_2624 - putative lipoprotein 2589 56.10 0 3184816..3185553 - 245 66045861 - Psyr_2625 - putative lipoprotein 2590 55.04 -1 3185586..3187133 - 515 66045862 - Psyr_2626 - hypothetical protein 2591 59.89 0 3187123..3188346 - 407 66045863 - Psyr_2627 - hypothetical protein 2592 57.58 0 3188330..3189022 - 230 66045864 - Psyr_2628 - ABC transporter 2593 57.78 0 3189024..3191015 - 663 66045865 - Psyr_2629 - von Willebrand factor, type A 2594 59.48 0 3191012..3192040 - 342 66045866 - Psyr_2630 - hypothetical protein 2595 60.63 0 3192044..3194743 - 899 66045867 - Psyr_2631 - type III effector HopL1 2596 59.01 0 3194740..3197874 - 1044 66045868 - Psyr_2632 - virulence protein SrfB 2597 59.44 0 3197886..3199241 - 451 66045869 - Psyr_2633 - hypothetical protein 2598 57.83 0 3199820..3201448 + 542 66045870 - Psyr_2634 - histidine kinase, HAMP region: chemotaxis sensory transducer 2599 59.97 0 3201692..3202870 + 392 66045871 - Psyr_2635 - hypothetical protein 2600 58.50 0 3202967..3203407 - 146 66045872 - Psyr_2636 - TspO/MBR-related protein 2601 63.42 0 3203776..3205101 + 441 66045873 - Psyr_2637 - FAD dependent oxidoreductase 2602 58.73 0 3205149..3206219 - 356 66045874 - Psyr_2638 - hypothetical protein 2603 55.48 0 3206701..3207165 + 154 66045875 - Psyr_2639 - hypothetical protein 2604 52.35 -1 3207940..3208386 + 148 66045876 - Psyr_2640 - NUDIX hydrolase 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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