version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2426 59.73 0 2849581..2851239 - 552 66045698 - Psyr_2462 - nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:nitrite and sulphite reductase 4Fe-4S region 2427 59.67 0 2851794..2852894 + 366 66045699 - Psyr_2463 - sugar-binding domain-containing protein 2428 60.94 0 2852906..2856625 - 1239 66045700 metH Psyr_2464 - B12-dependent methionine synthase 2429 56.70 0 2857032..2858054 + 340 66045701 - Psyr_2465 - acyltransferase 3 2430 57.58 0 2858125..2858718 + 197 66045702 - Psyr_2466 - HesB/YadR/YfhF:nitrogen-fixing NifU, C-terminal 2431 63.90 +1 2858815..2860764 - 649 66045703 - Psyr_2467 - carbamoyl-phosphate synthase subunit L 2432 62.79 0 2860761..2861636 - 291 66045704 - Psyr_2468 - gamma-carboxygeranoyl-CoA hydratase 2433 63.18 0 2861651..2863258 - 535 66045705 - Psyr_2469 - propionyl-CoA carboxylase 2434 61.86 0 2863272..2864435 - 387 66045706 - Psyr_2470 - isovaleryl-CoA dehydrogenase 2435 63.44 0 2865211..2866110 - 299 66045707 - Psyr_2471 - hydroxymethylglutaryl-CoA lyase 2436 58.52 0 2866141..2866533 - 130 66045708 - Psyr_2472 - regulatory protein, MerR 2437 60.22 0 2866699..2867628 - 309 66045709 - Psyr_2473 - regulatory protein, LysR:LysR, substrate-binding 2438 62.20 0 2867814..2869043 + 409 66045710 - Psyr_2474 - Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region 2439 60.86 0 2869055..2870398 - 447 66045711 - Psyr_2475 - OmpA/MotB 2440 57.56 0 2870547..2871359 - 270 66045712 - Psyr_2476 - exonuclease III 2441 58.93 0 2871552..2872223 + 223 66045713 - Psyr_2477 - hypothetical protein 2442 60.12 0 2872283..2874007 + 574 66045714 - Psyr_2478 - surface antigen (D15):surface antigen variable number 2443 61.67 0 2874013..2877693 + 1226 66045715 - Psyr_2479 - hypothetical protein 2444 62.09 0 2877813..2878730 + 305 66045716 - Psyr_2480 - regulatory protein, LysR:LysR, substrate-binding 2445 59.48 0 2878821..2879321 + 166 66045717 - Psyr_2481 - Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2446 60.08 0 2879475..2880779 + 434 66045718 - Psyr_2482 - secretion protein HlyD 2447 61.36 0 2880776..2883886 + 1036 66045719 - Psyr_2483 - acriflavin resistance protein 2448 60.42 0 2883883..2886990 + 1035 66045720 - Psyr_2484 - acriflavin resistance protein 2449 62.09 0 2886987..2888450 + 487 66045721 - Psyr_2485 - RND efflux system, outer membrane lipoprotein, NodT 2450 59.99 0 2888620..2890731 + 703 66045722 - Psyr_2486 - GGDEF 2451 60.78 0 2890843..2891589 + 248 66045723 - Psyr_2487 - Short-chain dehydrogenase/reductase SDR 2452 57.06 0 2891634..2891966 - 110 66045724 - Psyr_2488 - hypothetical protein 2453 60.23 0 2892304..2894322 + 672 66045725 - Psyr_2489 - Alpha amylase, catalytic region 2454 59.96 0 2894342..2897668 + 1108 66045726 - Psyr_2490 - Alpha amylase, catalytic region 2455 60.29 0 2897665..2899890 + 741 66045727 - Psyr_2491 - glycogen branching enzyme 2456 62.04 0 2899921..2902665 - 914 66045728 - Psyr_2492 - Outer membrane autotransporter barrel 2457 61.76 0 2902927..2904150 - 407 66045729 - Psyr_2493 - hypothetical protein 2458 60.41 0 2904276..2905409 + 377 66045730 - Psyr_2494 - hypothetical protein 2459 58.93 0 2905473..2907062 - 529 66045731 - Psyr_2495 - ABC transporter 2460 52.33 -1 2907437..2908273 - 278 66045732 - Psyr_2496 - lipopolysaccharide core biosynthesis domain-containing protein 2461 58.26 0 2909158..2909859 + 233 66045733 - Psyr_2497 - putative lipoprotein 2462 58.97 0 2909986..2910531 + 181 66045734 - Psyr_2498 - GCN5-related N-acetyltransferase 2463 58.01 0 2910562..2911185 + 207 66045735 - Psyr_2499 - glutathione S-transferase 2464 56.57 0 2911256..2911681 + 141 66045736 - Psyr_2500 - hypothetical protein 2465 54.45 -1 2911758..2912240 + 160 66045737 - Psyr_2501 - hemerythrin 2466 60.00 0 2912289..2912648 + 119 66045738 - Psyr_2502 - hypothetical protein 2467 57.39 0 2913035..2913886 + 283 66045739 - Psyr_2503 - extracellular solute-binding protein 2468 58.67 0 2913950..2914612 + 220 66045740 - Psyr_2504 - amino acid ABC transporter permease 2469 59.28 0 2914622..2915284 + 220 66045741 - Psyr_2505 - amino acid ABC transporter permease 2470 59.03 0 2915281..2916066 + 261 66045742 - Psyr_2506 - ABC transporter 2471 58.88 0 2916083..2916493 + 136 66045743 - Psyr_2507 - endoribonuclease L-PSP 2472 60.00 0 2916576..2917340 + 254 66045744 - Psyr_2508 - regulatory proteins, IclR 2473 61.69 0 2917357..2918562 + 401 66045745 - Psyr_2509 - hypothetical protein 2474 64.39 +1 2918589..2919512 + 307 66045746 - Psyr_2510 - carbohydrate kinase, PfkB 2475 60.07 0 2919741..2922134 + 797 66045747 - Psyr_2511 - UvrD/REP helicase 2476 55.06 -1 2922145..2922411 - 88 66045748 - Psyr_2512 - hypothetical protein 2477 57.13 0 2922800..2923879 + 359 66045749 - Psyr_2513 - extracellular solute-binding protein 2478 61.34 0 2923886..2924599 - 237 66045750 - Psyr_2514 - ABC transporter 2479 62.07 0 2924603..2925451 - 282 66045751 - Psyr_2515 - binding-protein dependent transport system inner membrane protein 2480 60.83 0 2925448..2926458 - 336 66045752 - Psyr_2516 - ABC transporter, substrate-binding protein, aliphatic sulphonates 2481 44.72 -2 2926540..2926785 - 81 66045753 - Psyr_2517 - hypothetical protein 2482 57.35 0 2927079..2927765 + 228 66045754 - Psyr_2518 - hypothetical protein 2483 61.35 0 2927785..2928780 - 331 66045755 - Psyr_2519 - aldo/keto reductase 2484 62.46 0 2928985..2929602 + 205 66045756 - Psyr_2520 - LexA repressor 2485 67.79 +2 2929599..2930222 + 207 66045757 - Psyr_2521 - hypothetical protein 2486 66.04 +1 2930230..2931660 + 476 66045758 - Psyr_2522 - hypothetical protein 2487 63.15 0 2931657..2934752 + 1031 66045759 dnaE2 Psyr_2523 - error-prone DNA polymerase 2488 61.20 0 2934727..2935659 + 310 66045760 - Psyr_2524 - hypothetical protein 2489 55.91 0 2935664..2936593 - 309 66045761 - Psyr_2525 - Mg2+ transporter protein, CorA-like 2490 58.10 0 2936598..2938184 - 528 66045762 - Psyr_2526 - glutathione synthase/ribosomal protein S6 modification glutaminyl transferase 2491 61.53 0 2938278..2939426 + 382 66045763 - Psyr_2527 - GCN5-related N-acetyltransferase 2492 63.23 0 2939423..2940325 + 300 66045764 - Psyr_2528 - polysaccharide deacetylase 2493 63.10 0 2940346..2941605 - 419 66045765 - Psyr_2529 - amidohydrolase 2494 61.86 0 2941602..2942912 - 436 66045766 - Psyr_2530 - major facilitator transporter 2495 64.36 +1 2943101..2944012 - 303 66045767 - Psyr_2531 - regulatory protein, LysR:LysR, substrate-binding 2496 63.58 +1 2944037..2944942 - 301 66045768 - Psyr_2532 - regulatory protein, LysR:LysR, substrate-binding 2497 61.75 0 2945093..2948140 + 1015 66045769 - Psyr_2533 - FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 2498 58.56 0 2948270..2949157 - 295 66045770 - Psyr_2534 - carboxymethylenebutenolidase 2499 57.74 0 2949567..2950619 + 350 66045771 - Psyr_2535 - GGDEF 2500 61.62 0 2950688..2951677 + 329 66045772 - Psyr_2536 - regulatory protein, LysR:LysR, substrate-binding 2501 64.27 +1 2951996..2953456 + 486 66045773 - Psyr_2537 - hypothetical protein 2502 60.72 0 2953453..2954427 + 324 66045774 - Psyr_2538 - binding-protein dependent transport system inner membrane protein 2503 61.02 0 2954424..2955344 + 306 66045775 - Psyr_2539 - binding-protein dependent transport system inner membrane protein 2504 65.48 +1 2955341..2956354 + 337 66045776 - Psyr_2540 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 2505 63.71 +1 2956344..2957357 + 337 66045777 - Psyr_2541 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 2506 60.73 0 2957409..2958974 + 521 66045778 - Psyr_2542 - extracellular solute-binding protein 2507 63.45 0 2959044..2959571 + 175 66045779 - Psyr_2543 - hypothetical protein 2508 60.54 0 2959571..2960158 + 195 66045780 - Psyr_2544 - alkylhydroperoxidase AhpD core 2509 60.15 0 2960263..2961060 + 265 66045781 - Psyr_2545 - metallophosphoesterase 2510 53.33 -1 2961089..2961448 - 119 66045782 - Psyr_2546 - DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump 2511 58.79 0 2961449..2962642 - 397 66045783 - Psyr_2547 - Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 2512 42.59 -2 2962772..2963041 - 89 66045784 - Psyr_2548 - hypothetical protein 2513 60.32 0 2963117..2964187 + 356 66045785 - Psyr_2549 - hypothetical protein 2514 60.54 0 2964184..2964738 + 184 66045786 - Psyr_2550 - hypothetical protein 2515 64.20 +1 2964735..2965991 + 418 66045787 - Psyr_2551 - aminotransferase class-III 2516 60.47 0 2966004..2966471 + 155 66045788 - Psyr_2552 - cyclase/dehydrase 2517 61.89 0 2966473..2967582 + 369 66045789 - Psyr_2553 - dehydrogenase domain-containing protein 2518 61.36 0 2967617..2968633 + 338 66045790 - Psyr_2554 - Fatty acid desaturase 2519 58.87 0 2968638..2969150 + 170 66045791 - Psyr_2555 - (dCTP deaminase), deoxycytidine triphosphate deaminase 2520 57.48 0 2969153..2969827 + 224 66045792 dcd Psyr_2556 - deoxycytidine triphosphate deaminase 2521 61.50 0 2969817..2971712 + 631 66045793 - Psyr_2557 - phosphoenolpyruvate synthase/pyruvate phosphate dikinase 2522 58.02 0 2971709..2972887 + 392 66045794 - Psyr_2558 - hypothetical protein 2523 61.74 0 2972912..2974048 + 378 66045795 - Psyr_2559 - hypothetical protein 2524 62.75 0 2974045..2975091 + 348 66045796 - Psyr_2560 - hypothetical protein 2525 59.01 0 2975104..2975691 + 195 66045797 - Psyr_2561 - hypothetical protein 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.