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Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1938 64.45 +1 2284475..2285647 - 390 66045210 - Psyr_1970 - secretion protein HlyD 1939 61.71 0 2285834..2288173 + 779 66045211 - Psyr_1971 - peptidase S45, penicillin amidase 1940 59.94 0 2288226..2288537 - 103 66045212 - Psyr_1972 - hypothetical protein 1941 61.74 0 2288809..2290005 - 398 66045213 - Psyr_1973 - aromatic amino acid aminotransferase 1942 60.81 0 2290405..2292420 + 671 66045214 - Psyr_1974 - excinuclease ABC subunit B 1943 53.28 -1 2292586..2293392 - 268 66045215 - Psyr_1975 - integrase catalytic subunit 1944 52.91 -1 2293422..2293937 - 171 66045216 - Psyr_1976 - ISPsy8, transposase OrfA 1945 60.80 0 2294713..2296194 + 493 66045217 gltX Psyr_1977 - glutamyl-tRNA synthetase 1946 60.82 0 2297353..2297814 + 153 66045218 - Psyr_1978 - thioesterase superfamily protein 1947 62.84 0 2297844..2298809 + 321 66045219 - Psyr_1979 - dihydrouridine synthase, DuS 1948 55.41 0 2298939..2299382 + 147 66045220 - Psyr_1980 - heat shock protein Hsp20 1949 61.01 0 2299450..2301642 - 730 66045221 - Psyr_1981 - PAS:GGDEF 1950 61.17 0 2301706..2302578 - 290 66045222 - Psyr_1982 - regulatory protein, LysR:LysR, substrate-binding 1951 62.53 0 2302724..2304148 + 474 66045223 - Psyr_1983 - isopropylmalate isomerase large subunit 1952 57.63 0 2304159..2304800 + 213 66045224 leuD Psyr_1984 - isopropylmalate isomerase small subunit 1953 61.03 0 2304956..2306038 + 360 66045225 - Psyr_1985 - 3-isopropylmalate dehydrogenase 1954 62.08 0 2306109..2307221 + 370 66045226 - Psyr_1986 - aspartate-semialdehyde dehydrogenase 1955 64.98 +1 2307402..2308406 + 334 66045227 - Psyr_1987 - 2-keto-3-deoxy-galactonokinase 1956 63.36 0 2308408..2309043 + 211 66045228 - Psyr_1988 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 1957 61.11 0 2309056..2310261 + 401 66045229 - Psyr_1989 - mandelate racemase/muconate lactonizing protein 1958 61.86 0 2310588..2311898 + 436 66045230 - Psyr_1990 - D-galactonate transporter 1959 61.60 0 2311978..2312787 + 269 66045231 - Psyr_1991 - regulatory proteins, IclR 1960 61.35 0 2312799..2313851 - 350 66045232 - Psyr_1992 - zinc-containing alcohol dehydrogenase superfamily protein 1961 61.52 0 2314031..2314924 + 297 66045233 - Psyr_1993 - helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal 1962 60.02 0 2315047..2316702 - 551 66045234 - Psyr_1994 - electron-transferring-flavoprotein dehydrogenase 1963 58.93 0 2317222..2317971 + 249 66045235 - Psyr_1995 - electron transfer flavoprotein subunit beta 1964 60.75 0 2317972..2318901 + 309 66045236 - Psyr_1996 - electron transfer flavoprotein subunit alpha 1965 61.11 0 2319018..2319845 + 275 66045237 - Psyr_1997 - hypothetical protein 1966 62.71 0 2319856..2320209 + 117 66045238 - Psyr_1998 - putative lipoprotein 1967 60.17 0 2320206..2321021 + 271 66045239 - Psyr_1999 - OmpA/MotB 1968 59.65 0 2321239..2322678 + 479 66045240 - Psyr_2000 - regulatory protein, GntR 1969 58.26 0 2322793..2323434 + 213 66045241 - Psyr_2001 - hypothetical protein 1970 62.40 0 2323529..2323786 + 85 66045242 - Psyr_2002 - hypothetical protein 1971 56.40 0 2323861..2324454 + 197 66045243 - Psyr_2003 - hypothetical protein 1972 59.53 0 2324521..2325810 - 429 66045244 gltA Psyr_2004 - type II citrate synthase 1973 53.87 -1 2326172..2326546 + 124 66045245 - Psyr_2005 - succinate dehydrogenase, cytochrome b subunit 1974 58.27 0 2326540..2326908 + 122 66045246 - Psyr_2006 - succinate dehydrogenase, hydrophobic membrane anchor protein 1975 59.90 0 2326912..2328684 + 590 66045247 sdhA Psyr_2007 - succinate dehydrogenase flavoprotein subunit 1976 57.45 0 2328697..2329401 + 234 66045248 sdhB Psyr_2008 - succinate dehydrogenase iron-sulfur subunit 1977 58.93 0 2329661..2332492 + 943 66045249 kgd Psyr_2009 - alpha-ketoglutarate decarboxylase 1978 58.66 0 2332534..2333769 + 411 66045250 - Psyr_2010 - dihydrolipoamide acetyltransferase 1979 59.57 0 2333942..2335378 + 478 66045251 - Psyr_2011 - dihydrolipoamide dehydrogenase 1980 57.93 0 2335587..2336753 + 388 66045252 sucC Psyr_2012 - succinyl-CoA synthetase subunit beta 1981 58.16 0 2336753..2337634 + 293 66045253 - Psyr_2013 - succinyl-CoA synthetase subunit alpha 1982 61.11 0 2337733..2338308 - 191 66045254 - Psyr_2014 - hypothetical protein 1983 62.33 0 2338610..2339923 + 437 66045255 - Psyr_2015 - branched chain amino acid ABC transporter carrier protein 1984 54.02 -1 2340017..2340277 - 86 66045256 - Psyr_2016 - putative lipoprotein 1985 57.58 0 2340585..2342498 + 637 66045257 - Psyr_2017 - heat shock protein 90 1986 57.20 0 2342589..2343317 + 242 66045258 - Psyr_2018 - dienelactone hydrolase 1987 60.87 0 2343838..2345061 - 407 66045259 - Psyr_2019 - 3-oxoacyl-(acyl carrier protein) synthase I 1988 58.91 0 2345072..2345587 - 171 66045260 - Psyr_2020 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1989 60.53 0 2345809..2347746 - 645 66045261 - Psyr_2021 - response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal 1990 60.62 0 2348031..2349056 + 341 66045262 gpsA Psyr_2022 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1991 61.74 0 2349081..2349425 + 114 66045263 - Psyr_2023 - hypothetical protein 1992 62.50 0 2349422..2349877 + 151 66045264 - Psyr_2024 - phosphohistidine phosphatase SixA 1993 58.56 0 2349940..2350383 + 147 66045265 - Psyr_2025 - phenylacetic acid degradation-related protein 1994 63.46 0 2350634..2351443 + 269 66045266 - Psyr_2026 - hypothetical protein 1995 62.81 0 2351440..2352294 + 284 66045267 - Psyr_2027 - Alpha/beta hydrolase fold 1996 63.42 0 2352422..2353252 + 276 66045268 - Psyr_2028 - hypothetical protein 1997 63.23 0 2353322..2354368 + 348 66045269 - Psyr_2029 - hypothetical protein 1998 58.73 0 2354414..2355169 - 251 66045270 - Psyr_2030 - calcium-binding EF-hand 1999 63.00 0 2355285..2356319 - 344 66045271 - Psyr_2031 - sensor histidine kinase 2000 62.44 0 2356316..2357095 - 259 66045272 - Psyr_2032 - response regulator receiver:transcriptional regulatory protein, C-terminal 2001 56.33 0 2357475..2359553 + 692 66045273 - Psyr_2033 - hypothetical protein 2002 59.98 0 2359849..2362047 + 732 66045274 - Psyr_2034 - Outer membrane autotransporter barrel 2003 58.09 0 2362151..2363689 + 512 66045275 - Psyr_2035 - hypothetical protein 2004 58.60 0 2363731..2364846 - 371 66045276 - Psyr_2036 - fimbrial protein 2005 60.66 0 2364893..2367406 - 837 66045277 - Psyr_2037 - fimbrial biogenesis outer membrane usher protein 2006 56.22 0 2367444..2368190 - 248 66045278 - Psyr_2038 - pili assembly chaperone: pili assembly chaperone 2007 58.70 0 2368298..2368849 - 183 66045279 - Psyr_2039 - fimbrial protein 2008 57.93 0 2369211..2374259 - 1682 66045280 - Psyr_2040 - YD repeat-containing protein 2009 57.30 0 2374542..2378834 + 1430 66045281 - Psyr_2041 - hypothetical protein 2010 57.96 0 2378885..2384074 + 1729 66045282 - Psyr_2042 - hypothetical protein 2011 53.29 -1 2384111..2384596 + 161 66045283 - Psyr_2043 - putative lipoprotein 2012 57.00 0 2384690..2389426 + 1578 66045284 - Psyr_2044 - YD repeat-containing protein 2013 57.20 0 2389505..2389768 - 87 66045285 - Psyr_2045 - regulatory protein, LuxR 2014 54.05 -1 2389996..2390106 + 36 66045286 - Psyr_2046 - hypothetical protein 2015 64.25 +1 2390109..2391803 + 564 66045287 - Psyr_2047 - potassium-transporting ATPase subunit A 2016 63.35 0 2391814..2393892 + 692 66045288 - Psyr_2048 - haloacid dehalogenase-like hydrolase:E1-E2 ATPase-associated region 2017 63.41 0 2393905..2394519 + 204 66045289 - Psyr_2049 - potassium-transporting ATPase subunit C 2018 66.10 +1 2394587..2397250 + 887 66045290 - Psyr_2050 - osmosensitive K+ channel signal transduction histidine kinase 2019 63.06 0 2397247..2397939 + 230 66045291 - Psyr_2051 - response regulator receiver:transcriptional regulatory protein, C-terminal 2020 58.06 0 2398036..2398314 + 92 66045292 - Psyr_2052 - putative lipoprotein 2021 63.07 0 2399300..2400217 + 305 66045293 - Psyr_2053 - moxR protein, putative 2022 62.80 0 2400214..2401170 + 318 66045294 - Psyr_2054 - hypothetical protein 2023 63.33 0 2401167..2403176 + 669 66045295 - Psyr_2055 - transglutaminase-like 2024 61.94 0 2403201..2403962 + 253 66045296 - Psyr_2056 - CHAD 2025 64.04 +1 2404082..2404879 + 265 66045297 - Psyr_2057 - acyl-CoA thioesterase II, putative 2026 60.91 0 2404892..2405134 - 80 66045298 - Psyr_2058 - hypothetical protein 2027 62.87 0 2405242..2406717 - 491 66045299 - Psyr_2059 - histidine kinase, HAMP region: chemotaxis sensory transducer 2028 61.56 0 2406820..2407641 - 273 66045300 - Psyr_2060 - TatD-related deoxyribonuclease 2029 61.32 0 2407822..2409243 + 473 66045301 - Psyr_2061 - SLT 2030 60.69 0 2409356..2409790 + 144 66045302 - Psyr_2062 - DoxD-like family protein 2031 61.17 0 2410035..2410343 + 102 66045303 - Psyr_2063 - hypothetical protein 2032 60.00 0 2410448..2410777 + 109 66045304 - Psyr_2064 - hypothetical protein 2033 57.17 0 2410825..2411298 + 157 66045305 greB Psyr_2065 - transcription elongation factor GreB 2034 64.56 +1 2411391..2413907 - 838 66045306 - Psyr_2066 - hypothetical protein 2035 63.45 0 2413907..2414590 - 227 66045307 - Psyr_2067 - ABC transporter 2036 59.06 0 2414589..2415206 + 205 66045308 - Psyr_2068 - arylesterase 2037 60.99 0 2415263..2415544 + 93 66045309 - Psyr_2069 - hypothetical protein 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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