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Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1892 52.86 -1 2196210..2197433 + 407 66045164 - Psyr_1923 - hypothetical protein 1893 52.88 -1 2197408..2198067 + 219 66045165 - Psyr_1924 - hypothetical protein 1894 56.13 0 2198097..2199377 + 426 66045166 - Psyr_1925 - diaminobutyrate--2-oxoglutarate aminotransferase 1895 50.21 -2 2199377..2200087 + 236 66045167 - Psyr_1926 - hypothetical protein 1896 53.91 -1 2200095..2200541 + 148 66045168 - Psyr_1927 - hypothetical protein 1897 52.81 -1 2200825..2201748 + 307 66045169 - Psyr_1928 - regulatory protein, LysR:LysR, substrate-binding 1898 41.01 -2 2202390..2203679 - 429 66045170 - Psyr_1929 - hypothetical protein 1899 38.75 -2 2203955..2204692 + 245 66045171 - Psyr_1930 - hypothetical protein 1900 47.53 -2 2204891..2205214 - 107 66045172 - Psyr_1931 - hypothetical protein 1901 55.70 0 2205928..2206392 - 154 66045173 - Psyr_1933 - hypothetical protein 1902 44.50 -2 2207057..2207692 + 211 66045174 - Psyr_1934 - hypothetical protein 1903 48.69 -2 2208062..2208556 - 164 66045175 - Psyr_1935 - hypothetical protein 1904 59.31 0 2209059..2210078 + 339 66045176 - Psyr_1936 - tRNA-dihydrouridine synthase A 1905 61.11 0 2210190..2210621 + 143 66045177 - Psyr_1937 - hypothetical protein 1906 61.94 0 2210622..2211086 - 154 66045178 - Psyr_1938 - response regulator receiver 1907 61.50 0 2211083..2213422 - 779 66045179 - Psyr_1939 - PAS 1908 64.13 +1 2213419..2214087 - 222 66045180 - Psyr_1940 - LuxR response regulator receiver 1909 63.04 0 2214084..2215268 - 394 66045181 - Psyr_1941 - sensor histidine kinase 1910 59.24 0 2215461..2215985 + 174 66045182 - Psyr_1942 - hypothetical protein 1911 58.10 0 2216064..2216600 - 178 66045183 - Psyr_1943 - extracytoplasmic-function sigma-70 factor PvdS 1912 62.19 0 2216917..2217675 + 252 66045184 - Psyr_1944 - thioesterase 1913 64.59 +1 2217771..2230781 + 4336 66045185 - Psyr_1945 - peptide synthase 1914 63.13 0 2230946..2232358 + 470 66045186 - Psyr_1946 - diaminobutyrate--2-oxoglutarate aminotransferase 1915 54.79 -1 2232440..2232658 + 72 66045187 - Psyr_1947 - MbtH-like protein 1916 63.07 0 2233389..2234306 - 305 66045188 - Psyr_1948 - ABC transporter, periplasmic substrate-binding protein, putative 1917 62.22 0 2234307..2235206 - 299 66045189 - Psyr_1949 - hypothetical protein 1918 63.92 +1 2235206..2235970 - 254 66045190 - Psyr_1950 - ABC transporter 1919 62.38 0 2235967..2236899 - 310 66045191 - Psyr_1951 - periplasmic solute binding protein 1920 63.49 0 2236935..2237501 - 188 66045192 - Psyr_1952 - hypothetical protein 1921 63.36 0 2237498..2237830 - 110 66045193 - Psyr_1953 - hypothetical protein 1922 61.17 0 2237827..2238372 - 181 66045194 - Psyr_1954 - hypothetical protein 1923 61.68 0 2238369..2239592 - 407 66045195 - Psyr_1955 - peptidase 1924 61.25 0 2239889..2240866 + 325 66045196 - Psyr_1956 - pyoverdine biosynthesis regulatory gene, putative 1925 64.91 +1 2241385..2244795 + 1136 66045197 - Psyr_1957 - amino acid adenylation 1926 63.35 0 2244792..2252792 + 2666 66045198 - Psyr_1958 - non-ribosomal peptide synthase:amino acid adenylation 1927 62.60 0 2252807..2259271 + 2154 66045199 - Psyr_1959 - amino acid adenylation 1928 63.55 +1 2259252..2267903 + 2883 66045200 - Psyr_1960 - non-ribosomal peptide synthase:amino acid adenylation 1929 61.69 0 2268408..2270819 - 803 66045201 - Psyr_1961 - TonB-dependent siderophore receptor 1930 61.45 0 2271070..2273310 - 746 66045202 - Psyr_1962 - TonB-dependent siderophore receptor 1931 62.67 0 2273616..2275292 - 558 66045203 - Psyr_1963 - cyclic peptide transporter 1932 63.44 0 2275359..2276225 - 288 66045204 - Psyr_1964 - hypothetical protein 1933 63.39 0 2276273..2277553 - 426 66045205 - Psyr_1965 - twin-arginine translocation pathway signal 1934 61.43 0 2277546..2278940 - 464 66045206 - Psyr_1966 - peptidase M19, renal dipeptidase 1935 64.04 +1 2279123..2280757 + 544 66045207 - Psyr_1967 - twin-arginine translocation pathway signal 1936 65.44 +1 2281105..2282493 - 462 66045208 - Psyr_1968 - RND efflux system, outer membrane lipoprotein, NodT 1937 63.93 +1 2282501..2284474 - 657 66045209 - Psyr_1969 - ABC transporter 1938 64.45 +1 2284475..2285647 - 390 66045210 - Psyr_1970 - secretion protein HlyD 1939 61.71 0 2285834..2288173 + 779 66045211 - Psyr_1971 - peptidase S45, penicillin amidase 1940 59.94 0 2288226..2288537 - 103 66045212 - Psyr_1972 - hypothetical protein 1941 61.74 0 2288809..2290005 - 398 66045213 - Psyr_1973 - aromatic amino acid aminotransferase 1942 60.81 0 2290405..2292420 + 671 66045214 - Psyr_1974 - excinuclease ABC subunit B 1943 53.28 -1 2292586..2293392 - 268 66045215 - Psyr_1975 - integrase catalytic subunit 1944 52.91 -1 2293422..2293937 - 171 66045216 - Psyr_1976 - ISPsy8, transposase OrfA 1945 60.80 0 2294713..2296194 + 493 66045217 gltX Psyr_1977 - glutamyl-tRNA synthetase 1946 60.82 0 2297353..2297814 + 153 66045218 - Psyr_1978 - thioesterase superfamily protein 1947 62.84 0 2297844..2298809 + 321 66045219 - Psyr_1979 - dihydrouridine synthase, DuS 1948 55.41 0 2298939..2299382 + 147 66045220 - Psyr_1980 - heat shock protein Hsp20 1949 61.01 0 2299450..2301642 - 730 66045221 - Psyr_1981 - PAS:GGDEF 1950 61.17 0 2301706..2302578 - 290 66045222 - Psyr_1982 - regulatory protein, LysR:LysR, substrate-binding 1951 62.53 0 2302724..2304148 + 474 66045223 - Psyr_1983 - isopropylmalate isomerase large subunit 1952 57.63 0 2304159..2304800 + 213 66045224 leuD Psyr_1984 - isopropylmalate isomerase small subunit 1953 61.03 0 2304956..2306038 + 360 66045225 - Psyr_1985 - 3-isopropylmalate dehydrogenase 1954 62.08 0 2306109..2307221 + 370 66045226 - Psyr_1986 - aspartate-semialdehyde dehydrogenase 1955 64.98 +1 2307402..2308406 + 334 66045227 - Psyr_1987 - 2-keto-3-deoxy-galactonokinase 1956 63.36 0 2308408..2309043 + 211 66045228 - Psyr_1988 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 1957 61.11 0 2309056..2310261 + 401 66045229 - Psyr_1989 - mandelate racemase/muconate lactonizing protein 1958 61.86 0 2310588..2311898 + 436 66045230 - Psyr_1990 - D-galactonate transporter 1959 61.60 0 2311978..2312787 + 269 66045231 - Psyr_1991 - regulatory proteins, IclR 1960 61.35 0 2312799..2313851 - 350 66045232 - Psyr_1992 - zinc-containing alcohol dehydrogenase superfamily protein 1961 61.52 0 2314031..2314924 + 297 66045233 - Psyr_1993 - helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal 1962 60.02 0 2315047..2316702 - 551 66045234 - Psyr_1994 - electron-transferring-flavoprotein dehydrogenase 1963 58.93 0 2317222..2317971 + 249 66045235 - Psyr_1995 - electron transfer flavoprotein subunit beta 1964 60.75 0 2317972..2318901 + 309 66045236 - Psyr_1996 - electron transfer flavoprotein subunit alpha 1965 61.11 0 2319018..2319845 + 275 66045237 - Psyr_1997 - hypothetical protein 1966 62.71 0 2319856..2320209 + 117 66045238 - Psyr_1998 - putative lipoprotein 1967 60.17 0 2320206..2321021 + 271 66045239 - Psyr_1999 - OmpA/MotB 1968 59.65 0 2321239..2322678 + 479 66045240 - Psyr_2000 - regulatory protein, GntR 1969 58.26 0 2322793..2323434 + 213 66045241 - Psyr_2001 - hypothetical protein 1970 62.40 0 2323529..2323786 + 85 66045242 - Psyr_2002 - hypothetical protein 1971 56.40 0 2323861..2324454 + 197 66045243 - Psyr_2003 - hypothetical protein 1972 59.53 0 2324521..2325810 - 429 66045244 gltA Psyr_2004 - type II citrate synthase 1973 53.87 -1 2326172..2326546 + 124 66045245 - Psyr_2005 - succinate dehydrogenase, cytochrome b subunit 1974 58.27 0 2326540..2326908 + 122 66045246 - Psyr_2006 - succinate dehydrogenase, hydrophobic membrane anchor protein 1975 59.90 0 2326912..2328684 + 590 66045247 sdhA Psyr_2007 - succinate dehydrogenase flavoprotein subunit 1976 57.45 0 2328697..2329401 + 234 66045248 sdhB Psyr_2008 - succinate dehydrogenase iron-sulfur subunit 1977 58.93 0 2329661..2332492 + 943 66045249 kgd Psyr_2009 - alpha-ketoglutarate decarboxylase 1978 58.66 0 2332534..2333769 + 411 66045250 - Psyr_2010 - dihydrolipoamide acetyltransferase 1979 59.57 0 2333942..2335378 + 478 66045251 - Psyr_2011 - dihydrolipoamide dehydrogenase 1980 57.93 0 2335587..2336753 + 388 66045252 sucC Psyr_2012 - succinyl-CoA synthetase subunit beta 1981 58.16 0 2336753..2337634 + 293 66045253 - Psyr_2013 - succinyl-CoA synthetase subunit alpha 1982 61.11 0 2337733..2338308 - 191 66045254 - Psyr_2014 - hypothetical protein 1983 62.33 0 2338610..2339923 + 437 66045255 - Psyr_2015 - branched chain amino acid ABC transporter carrier protein 1984 54.02 -1 2340017..2340277 - 86 66045256 - Psyr_2016 - putative lipoprotein 1985 57.58 0 2340585..2342498 + 637 66045257 - Psyr_2017 - heat shock protein 90 1986 57.20 0 2342589..2343317 + 242 66045258 - Psyr_2018 - dienelactone hydrolase 1987 60.87 0 2343838..2345061 - 407 66045259 - Psyr_2019 - 3-oxoacyl-(acyl carrier protein) synthase I 1988 58.91 0 2345072..2345587 - 171 66045260 - Psyr_2020 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1989 60.53 0 2345809..2347746 - 645 66045261 - Psyr_2021 - response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal 1990 60.62 0 2348031..2349056 + 341 66045262 gpsA Psyr_2022 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1991 61.74 0 2349081..2349425 + 114 66045263 - Psyr_2023 - hypothetical protein 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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