version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 125 53.97 -1 135970..136410 + 146 66043396 - Psyr_0126 - hypothetical protein 126 52.97 -1 136494..136931 + 145 66043397 - Psyr_0127 - glutathione-dependent formaldehyde-activating, GFA 127 53.01 -1 137161..137526 + 121 66043398 - Psyr_0128 - hypothetical protein 128 57.33 0 137656..137955 + 99 66043399 - Psyr_0129 - hypothetical protein 129 53.69 -1 138083..138991 - 302 66043400 - Psyr_0130 - hypothetical protein 130 58.37 0 139587..140261 + 224 66043401 - Psyr_0131 - HAD family hydrolase 131 62.25 0 140362..140610 - 82 66043402 - Psyr_0132 - hypothetical protein 132 60.72 0 140694..141164 - 156 66043403 - Psyr_0133 - helix-turn-helix, Fis-type 133 62.54 0 142016..143203 + 395 66043404 - Psyr_0134 - aminotransferase, class V 134 64.48 +1 144401..145225 + 274 66043405 - Psyr_0135 - TonB, C-terminal 135 63.56 +1 145279..145986 + 235 66043406 - Psyr_0136 - MotA/TolQ/ExbB proton channel 136 58.46 0 145986..146387 + 133 66043407 - Psyr_0137 - biopolymer transport protein ExbD/TolR 137 60.92 0 146598..149312 + 904 66043408 - Psyr_0138 - TonB-dependent receptor:TonB-dependent receptor 138 62.26 0 149457..151340 + 627 66043409 - Psyr_0139 - extracellular solute-binding protein 139 61.70 0 151342..152409 + 355 66043410 - Psyr_0140 - binding-protein dependent transport system inner membrane protein 140 63.83 +1 152409..153431 + 340 66043411 - Psyr_0141 - binding-protein dependent transport system inner membrane protein 141 63.13 0 153433..155016 + 527 66043412 - Psyr_0142 - ABC transporter 142 62.66 0 155026..156546 - 506 66043413 - Psyr_0143 - chemotaxis sensory transducer 143 53.99 -1 157030..157518 - 162 66043414 - Psyr_0144 - regulatory proteins, AsnC/Lrp 144 62.52 0 157566..158240 - 224 66043415 - Psyr_0145 - hypothetical protein 145 62.38 0 158304..159608 - 434 66043416 - Psyr_0146 - 4-aminobutyrate aminotransferase 146 62.26 0 159893..160822 + 309 66043417 - Psyr_0147 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 147 58.75 0 160872..161111 + 79 66043418 - Psyr_0148 - hypothetical protein 148 64.06 +1 161189..162646 - 485 66043419 - Psyr_0149 - succinic semialdehyde dehydrogenase 149 63.99 +1 162761..163918 - 385 66043420 - Psyr_0150 - acetylornithine deacetylase 150 62.74 0 163915..165084 - 389 66043421 - Psyr_0151 - FAD dependent oxidoreductase 151 64.96 +1 165081..166490 - 469 66043422 - Psyr_0152 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region 152 64.42 +1 166469..166780 - 103 66043423 - Psyr_0153 - hypothetical protein 153 64.98 +1 166777..168618 - 613 66043424 - Psyr_0154 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 154 64.51 +1 168620..169498 - 292 66043425 - Psyr_0155 - binding-protein dependent transport system inner membrane protein 155 61.65 0 169495..170451 - 318 66043426 - Psyr_0156 - binding-protein dependent transport system inner membrane protein 156 61.54 0 170483..172120 - 545 66043427 - Psyr_0157 - twin-arginine translocation pathway signal 157 62.58 0 172214..173509 - 431 66043428 - Psyr_0158 - FAD dependent oxidoreductase 158 56.50 0 173555..174223 - 222 66043429 - Psyr_0159 - HAD family hydrolase 159 64.22 +1 174758..175615 + 285 66043430 - Psyr_0160 - GCN5-related N-acetyltransferase 160 62.61 0 175914..176627 + 237 66043431 - Psyr_0161 - hypothetical protein 161 52.67 -1 177069..177518 + 149 66043432 - Psyr_0162 - hypothetical protein 162 53.25 -1 177649..178356 + 235 66043433 - Psyr_0163 - hypothetical protein 163 58.30 0 178366..179082 + 238 66043434 - Psyr_0164 - hypothetical protein 164 58.33 0 179100..179543 - 147 66043435 - Psyr_0165 - GCN5-related N-acetyltransferase 165 42.03 -2 180107..181417 + 436 66043436 - Psyr_0166 - hypothetical protein 166 42.79 -2 181423..181845 + 140 66043437 - Psyr_0167 - hypothetical protein 167 60.84 0 182216..183760 - 514 66043438 - Psyr_0168 - phosphoenolpyruvate carboxykinase 168 62.13 0 183940..184842 - 300 66043439 hslO Psyr_0169 - Hsp33-like chaperonin 169 62.01 0 185020..185427 - 135 66043440 - Psyr_0170 - RNA-binding S4 170 56.19 0 185595..186377 + 260 66043441 - Psyr_0171 - EAL 171 58.28 0 186394..186870 + 158 66043442 - Psyr_0172 - hypothetical protein 172 59.27 0 186867..187772 + 301 66043443 - Psyr_0173 - S6 modification enzyme RimK 173 58.03 0 188229..189560 + 443 66043444 gltP Psyr_0174 - glutamate/aspartate:proton symporter 174 55.80 0 189651..189926 + 91 66043445 - Psyr_0175 - hypothetical protein 175 58.63 0 190143..190391 + 82 66043446 - Psyr_0176 - hypothetical protein 176 60.98 0 190574..193420 + 948 66043447 cyaA Psyr_0177 - adenylate cyclase 177 60.54 0 193552..193959 - 135 66043448 - Psyr_0178 - nucleoside diphosphate kinase regulator 178 65.82 +1 194094..194330 - 78 66043449 - Psyr_0179 - hypothetical protein 179 56.76 0 194333..194665 - 110 66043450 cyaY Psyr_0180 - frataxin-like protein 180 54.42 -1 194904..195050 + 48 66043451 - Psyr_0181 - lipoprotein LppL 181 62.58 0 195060..196307 + 415 66043452 - Psyr_0182 - diaminopimelate decarboxylase 182 61.01 0 196313..197143 + 276 66043453 dapF Psyr_0183 - diaminopimelate epimerase 183 62.45 0 197157..197891 + 244 66043454 - Psyr_0184 - hypothetical protein 184 62.22 0 197894..198793 + 299 66043455 xerC Psyr_0185 - site-specific tyrosine recombinase XerC 185 64.79 +1 198786..199478 + 230 66043456 - Psyr_0186 - HAD family hydrolase 186 60.55 0 199549..199875 - 108 66043457 - Psyr_0187 - hypothetical protein 187 60.56 0 199974..200399 - 141 66043458 - Psyr_0188 - hypothetical protein 188 61.21 0 200642..201979 - 445 66043459 - Psyr_0189 - ammonium transporter 189 52.80 -1 202013..202351 - 112 66043460 - Psyr_0190 - nitrogen regulatory protein P-II 190 61.96 0 202769..203044 + 91 66043461 - Psyr_0191 - hypothetical protein 191 62.06 0 203272..203901 + 209 66043462 - Psyr_0192 - hypothetical protein 192 61.33 0 203917..204834 - 305 66043463 - Psyr_0193 - helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal 193 63.27 0 205070..205804 + 244 66043464 - Psyr_0194 - Short-chain dehydrogenase/reductase SDR 194 50.40 -2 205820..206563 - 247 66043465 - Psyr_0195 - hypothetical protein 195 55.81 0 206567..209947 - 1126 66043466 - Psyr_0196 - hypothetical protein 196 65.86 +1 210345..211838 + 497 66043467 - Psyr_0197 - Mg chelatase-related protein 197 61.93 0 211908..213215 - 435 66043468 - Psyr_0198 - citrate transporter 198 62.69 0 213512..213913 + 133 66043469 - Psyr_0199 - glutathione-dependent formaldehyde-activating, GFA 199 60.94 0 213976..215373 - 465 66043470 - Psyr_0200 - hypothetical protein 200 63.73 +1 215460..217535 - 691 66043471 - Psyr_0201 - ATP-dependent DNA helicase RecG 201 60.50 0 217547..218470 - 307 66043472 - Psyr_0202 - regulatory protein, LysR:LysR, substrate-binding 202 61.98 0 218563..219309 - 248 66043473 - Psyr_0203 - TonB, C-terminal 203 58.45 0 219306..219731 - 141 66043474 - Psyr_0204 - biopolymer transport protein ExbD 204 63.45 0 219735..220697 - 320 66043475 - Psyr_0205 - MotA/TolQ/ExbB proton channel 205 63.49 0 220906..221754 + 282 66043476 - Psyr_0206 - hypothetical protein 206 61.11 0 221807..222544 - 245 66043477 - Psyr_0207 - putative lipoprotein 207 56.69 0 222599..222979 - 126 66043478 - Psyr_0208 - YjgF-like protein 208 60.40 0 223004..225127 - 707 66043479 - Psyr_0209 - RelA/SpoT protein 209 54.55 -1 225170..225433 - 87 66043480 rpoZ Psyr_0210 - DNA-directed RNA polymerase subunit omega 210 60.31 0 225581..226225 - 214 66043481 gmk Psyr_0211 - guanylate kinase 211 61.92 0 226239..227102 - 287 66043482 - Psyr_0212 - hypothetical protein 212 61.27 0 227415..228137 + 240 66043483 rph Psyr_0213 - ribonuclease PH 213 56.37 0 228159..228527 + 122 66043484 - Psyr_0214 - hypothetical protein 214 59.23 0 228597..229376 - 259 66043485 - Psyr_0215 - exodeoxyribonuclease III xth 215 60.75 0 229459..230100 + 213 66043486 pyrE Psyr_0216 - orotate phosphoribosyltransferase 216 64.61 +1 230111..230743 + 210 66043487 - Psyr_0217 - hypothetical protein 217 60.60 0 231075..231980 - 301 66043488 - Psyr_0218 - acetylglutamate kinase 218 59.59 0 232009..233406 - 465 66043489 - Psyr_0219 - phosphomannomutase 219 62.50 0 234646..235101 - 151 66043490 dut Psyr_0220 - deoxyuridine 5'-triphosphate nucleotidohydrolase 220 64.82 +1 235108..236355 - 415 66043491 - Psyr_0221 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 221 60.44 0 236452..237126 + 224 66043492 radC Psyr_0222 - DNA repair protein RadC 222 59.23 0 237260..238846 - 528 66043493 - Psyr_0223 - extracellular solute-binding protein 223 50.85 -2 239211..239444 + 77 66043494 rpmB Psyr_0224 - 50S ribosomal protein L28 224 44.23 -2 239456..239611 + 51 66043495 rpmG Psyr_0225 - 50S ribosomal protein L33 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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