version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1295 59.10 0 1498072..1498719 + 215 66044567 adk Psyr_1319 - adenylate kinase 1296 65.78 +1 1498812..1499486 + 224 66044568 - Psyr_1320 - peptidase M22, glycoprotease 1297 58.33 0 1499729..1500040 + 103 66044569 - Psyr_1321 - hypothetical protein 1298 59.49 0 1500043..1500906 + 287 66044570 - Psyr_1322 - hypothetical protein 1299 59.71 0 1501040..1501729 + 229 66044571 - Psyr_1323 - extensin-like, C-terminal 1300 59.46 0 1501766..1502389 - 207 66044572 - Psyr_1324 - hypothetical protein 1301 63.58 +1 1502486..1503295 + 269 66044573 - Psyr_1325 - hypothetical protein 1302 60.00 0 1503367..1504056 - 229 66044574 - Psyr_1326 - hypothetical protein 1303 53.85 -1 1504261..1504611 - 116 66044575 - Psyr_1327 - hypothetical protein 1304 60.19 0 1504725..1507226 - 833 66044576 - Psyr_1328 - glycerol-3-phosphate acyltransferase 1305 60.05 0 1507405..1507782 - 125 66044577 - Psyr_1329 - hypothetical protein 1306 63.95 +1 1507802..1508611 - 269 66044578 - Psyr_1330 - rRNA (guanine-N(1)-)-methyltransferase 1307 64.24 +1 1508611..1509762 - 383 66044579 - Psyr_1331 - succinyl-diaminopimelate desuccinylase 1308 54.49 -1 1509862..1512357 - 831 66044580 - Psyr_1332 - glycosyl transferase family protein 1309 60.65 0 1512659..1513489 + 276 66044581 - Psyr_1333 - UBA/THIF-type NAD/FAD binding fold 1310 62.01 0 1513480..1513887 - 135 66044582 - Psyr_1334 - Fe-S metabolism associated SufE 1311 62.80 0 1513884..1515125 - 413 66044583 - Psyr_1335 - aminotransferase, class V 1312 61.35 0 1515149..1516183 - 344 66044584 - Psyr_1336 - tetrahydrodipicolinate succinylase, putative 1313 54.89 -1 1516231..1516578 - 115 66044585 - Psyr_1337 - hypothetical protein 1314 55.27 0 1516748..1516984 - 78 66044586 - Psyr_1338 - hypothetical protein 1315 57.19 0 1517134..1517967 - 277 66044587 - Psyr_1339 - hypothetical protein 1316 61.39 0 1518114..1519307 - 397 66044588 - Psyr_1340 - hypothetical protein 1317 58.77 0 1519359..1522055 - 898 66044589 glnD Psyr_1341 - PII uridylyl-transferase 1318 57.85 0 1522121..1522903 - 260 66044590 - Psyr_1342 - methionine aminopeptidase 1319 54.84 -1 1523217..1523960 + 247 66044591 rpsB Psyr_1343 - 30S ribosomal protein S2 1320 55.32 0 1524151..1525014 + 287 66044592 tsf Psyr_1344 - elongation factor Ts 1321 58.03 0 1525220..1525960 + 246 66044593 pyrH Psyr_1345 - uridylate kinase 1322 58.06 0 1525960..1526517 + 185 66044594 frr Psyr_1346 - ribosome recycling factor 1323 61.90 0 1526534..1527289 + 251 66044595 - Psyr_1347 - di-trans-poly-cis-decaprenylcistransferase 1324 60.42 0 1527289..1528104 + 271 66044596 - Psyr_1348 - phosphatidate cytidylyltransferase 1325 62.13 0 1528101..1529291 + 396 66044597 - Psyr_1349 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1326 60.83 0 1529409..1530761 + 450 66044598 - Psyr_1350 - peptidase M50, putative membrane-associated zinc metallopeptidase 1327 57.24 0 1530836..1533211 + 791 66044599 - Psyr_1351 - surface antigen (D15):surface antigen variable number 1328 55.83 0 1533281..1533760 + 159 66044600 - Psyr_1352 - Outer membrane protein (OmpH-like) 1329 57.58 0 1533763..1534818 + 351 66044601 lpxD Psyr_1353 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1330 53.29 -1 1534928..1535368 + 146 66044602 fabZ Psyr_1354 - (3R)-hydroxymyristoyl-ACP dehydratase 1331 59.33 0 1535365..1536141 + 258 66044603 - Psyr_1355 - UDP-N-acetylglucosamine acyltransferase 1332 63.34 0 1536144..1537286 + 380 66044604 lpxB Psyr_1356 - lipid-A-disaccharide synthase 1333 60.43 0 1537295..1537951 + 218 66044605 rnhB Psyr_1357 - ribonuclease HII 1334 59.97 0 1538020..1541541 + 1173 66044606 dnaE Psyr_1358 - DNA polymerase III subunit alpha 1335 58.54 0 1541670..1542617 + 315 161486735 - Psyr_1359 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 1336 65.17 +1 1542753..1544090 + 445 66044608 - Psyr_1360 - PP-loop 1337 60.11 0 1544354..1545985 + 543 66044609 - Psyr_1361 - CTP synthetase 1338 57.21 0 1546000..1546845 + 281 66044610 - Psyr_1362 - 2-dehydro-3-deoxyphosphooctonate aldolase 1339 58.97 0 1546984..1548270 + 428 66044611 eno Psyr_1363 - phosphopyruvate hydratase 1340 54.34 -1 1548383..1548739 + 118 66044612 - Psyr_1364 - septum formation initiator 1341 63.71 +1 1548753..1549463 + 236 66044613 ispD Psyr_1365 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1342 61.65 0 1549471..1550367 - 298 66044614 - Psyr_1366 - regulatory protein, LysR:LysR, substrate-binding 1343 59.30 0 1550472..1551584 + 370 66044615 - Psyr_1367 - zinc-containing alcohol dehydrogenase superfamily protein 1344 60.05 0 1551681..1552526 + 281 66044616 - Psyr_1368 - carboxylesterase 1345 59.70 0 1552580..1553053 + 157 66044617 ispF Psyr_1369 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1346 62.80 0 1553050..1554108 + 352 66044618 truD Psyr_1370 - tRNA pseudouridine synthase D 1347 60.27 0 1554096..1554845 + 249 66044619 surE Psyr_1371 - stationary phase survival protein SurE 1348 60.62 0 1554845..1555522 + 225 66044620 pcm Psyr_1372 - protein-L-isoaspartate O-methyltransferase 1349 55.82 0 1555731..1556597 + 288 66044621 - Psyr_1373 - peptidoglycan-binding LysM:peptidase M23B 1350 55.26 0 1556701..1557708 + 335 66044622 - Psyr_1374 - RNA polymerase sigma factor RpoS 1351 54.32 -1 1558249..1558572 - 107 66044623 - Psyr_1375 - 4Fe-4S ferredoxin, iron-sulfur binding 1352 61.74 0 1558832..1561411 - 859 66044624 - Psyr_1376 - DNA mismatch repair protein 1353 62.87 0 1561808..1562386 + 192 66044625 - Psyr_1377 - CinA, C-terminal 1354 58.59 0 1562480..1563544 + 354 66044626 recA Psyr_1378 - recombinase A 1355 60.04 0 1563550..1564017 + 155 66044627 recX Psyr_1379 - recombination regulator RecX 1356 56.69 0 1564031..1565143 - 370 66044628 - Psyr_1380 - hypothetical protein 1357 55.88 0 1565337..1565753 - 138 66044629 - Psyr_1381 - hypothetical protein 1358 61.32 0 1566009..1566719 + 236 66044630 - Psyr_1382 - DTW 1359 63.93 +1 1566766..1566948 + 60 66044631 - Psyr_1383 - hypothetical protein 1360 59.10 0 1566964..1567611 + 215 66044632 - Psyr_1384 - LuxR response regulator receiver 1361 59.02 0 1567695..1568060 + 121 66044633 - Psyr_1385 - diacylglycerol kinase 1362 60.95 0 1568079..1569005 - 308 66044634 - Psyr_1386 - regulatory protein, LysR:LysR, substrate-binding 1363 58.72 0 1569129..1569908 + 259 66044635 - Psyr_1387 - ferredoxin--NADP(+) reductase 1364 65.51 +1 1570005..1570697 - 230 66044636 - Psyr_1388 - hypothetical protein 1365 53.90 -1 1570708..1571169 - 153 66044637 - Psyr_1389 - hypothetical protein 1366 60.76 0 1571249..1571959 - 236 66044638 - Psyr_1390 - RNA-binding S4 1367 57.60 0 1572052..1572492 - 146 66044639 - Psyr_1391 - GCN5-related N-acetyltransferase 1368 61.16 0 1572595..1573938 - 447 66044640 - Psyr_1392 - hypothetical protein 1369 60.16 0 1574250..1575341 - 363 66044641 - Psyr_1393 - hypothetical protein 1370 61.29 0 1575675..1577570 + 631 66044642 - Psyr_1394 - K+ potassium transporter 1371 62.17 0 1577656..1578990 - 444 66044643 - Psyr_1395 - virulence 1372 62.43 0 1578990..1581632 - 880 66044644 - Psyr_1396 - hypothetical protein 1373 60.56 0 1582602..1583666 + 354 66044645 - Psyr_1397 - DNA polymerase IV 1374 59.04 0 1583712..1584668 - 318 66044646 - Psyr_1398 - putative lipoprotein 1375 60.02 0 1584734..1586449 - 571 66044647 - Psyr_1399 - prolyl-tRNA synthetase 1376 55.80 0 1586621..1587964 - 447 66044648 - Psyr_1400 - outer membrane porin 1377 55.79 0 1588962..1589393 + 143 66044649 - Psyr_1401 - histidine triad (HIT) protein 1378 55.07 -1 1589390..1589596 + 68 66044650 - Psyr_1402 - hypothetical protein 1379 57.21 0 1589661..1589882 - 73 66044651 - Psyr_1403 - cold-shock protein, DNA-binding 1380 51.05 -1 1590728..1591201 + 157 66044652 - Psyr_1404 - Ferritin and Dps 1381 50.72 -2 1591543..1591887 + 114 66044653 - Psyr_1405 - hypothetical protein 1382 60.53 0 1592180..1593955 + 591 66044654 aspS Psyr_1406 - aspartyl-tRNA synthetase 1383 58.63 0 1594073..1594819 + 248 66044655 - Psyr_1407 - hypothetical protein 1384 60.95 0 1594950..1595474 + 174 66044656 ruvC Psyr_1408 - Holliday junction resolvase 1385 59.93 0 1595560..1596168 + 202 66044657 ruvA Psyr_1409 - Holliday junction DNA helicase motor protein 1386 61.49 0 1596169..1597230 + 353 66044658 ruvB Psyr_1410 - Holliday junction DNA helicase B 1387 57.69 0 1597365..1597832 + 155 66044659 - Psyr_1411 - 4-hydroxybenzoyl-CoA thioesterase 1388 57.90 0 1597822..1598517 + 231 66044660 - Psyr_1412 - MotA/TolQ/ExbB proton channel 1389 55.91 0 1598532..1598996 + 154 66044661 - Psyr_1413 - biopolymer transport protein ExbD/TolR 1390 53.87 -1 1598996..1600066 + 356 66044662 - Psyr_1414 - TonB, C-terminal 1391 56.53 0 1600063..1601364 + 433 66044663 tolB Psyr_1415 - translocation protein TolB 1392 58.33 0 1601417..1601920 + 167 66044664 - Psyr_1416 - OmpA/MotB 1393 58.50 0 1601999..1602745 + 248 66044665 - Psyr_1417 - TPR repeat-containing protein 1394 58.33 0 1602917..1603564 + 215 66044666 - Psyr_1418 - radical SAM family protein 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.