version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1189 65.83 +1 1367316..1368032 - 238 66044461 - Psyr_1210 - type III secretion protein HrcQa 1190 63.70 +1 1368029..1368601 - 190 66044462 - Psyr_1211 - type III secretion protein HrpP 1191 59.28 0 1368608..1369054 - 148 66044463 - Psyr_1212 - type III secretion protein HrpO 1192 65.70 +1 1369057..1370406 - 449 66044464 HrcN Psyr_1213 - type III secretion cytoplasmic ATPase HrcN 1193 62.97 0 1370403..1371377 - 324 66044465 - Psyr_1214 - type III secretion protein HrpQ 1194 60.34 0 1371411..1373498 - 695 66044466 - Psyr_1215 - Type III secretion protein HrcV 1195 60.58 0 1373498..1374679 - 393 66044467 - Psyr_1216 - type III secretion protein HrpJ 1196 55.68 0 1374846..1375400 + 184 66044468 - Psyr_1217 - sigma-70 region 2:sigma-70 region 4 1197 59.53 0 1375465..1377777 + 770 66044469 - Psyr_1218 - type III helper protein HrpK1 1198 50.62 -2 1377971..1378942 + 323 79093592 AvrB3 Psyr_1219 - type III effector protein AvrB3 1199 57.88 0 1379091..1380239 + 382 66044471 - Psyr_1220 - type III effector HopX1 1200 49.03 -2 1382497..1383732 - 411 66044472 - Psyr_1224 - type III effector HopZ3 1201 51.21 -1 1383729..1384181 - 150 66044473 - Psyr_1225 - hypothetical protein 1202 61.30 0 1384596..1384949 - 117 66044474 - Psyr_1226 - hypothetical protein 1203 63.10 0 1385354..1386418 + 354 66044475 queA Psyr_1227 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1204 60.05 0 1386415..1387548 + 377 66044476 tgt Psyr_1228 - queuine tRNA-ribosyltransferase 1205 55.06 -1 1387602..1387937 + 111 66044477 yajC Psyr_1229 - preprotein translocase subunit YajC 1206 58.86 0 1388001..1389869 + 622 66044478 secD Psyr_1230 - preprotein translocase subunit SecD 1207 60.20 0 1389879..1390790 + 303 66044479 secF Psyr_1231 - preprotein translocase subunit SecF 1208 56.85 0 1390899..1391438 + 179 66044480 - Psyr_1232 - hypothetical protein 1209 62.87 0 1391505..1392320 - 271 66044481 - Psyr_1233 - inositol monophosphatase 1210 63.27 0 1392536..1393300 + 254 66044482 - Psyr_1234 - RNA methyltransferase TrmH, group 1 1211 63.45 0 1393300..1394076 + 258 66044483 - Psyr_1235 - Serine O-acetyltransferase 1212 57.32 0 1394236..1394727 + 163 66044484 - Psyr_1236 - transcription factor IscR 1213 58.93 0 1394772..1395986 + 404 66044485 iscS Psyr_1237 - cysteine desulfurase 1214 57.36 0 1396068..1396454 + 128 66044486 - Psyr_1238 - scaffold protein 1215 57.72 0 1396526..1396849 + 107 66044487 - Psyr_1239 - HesB/YadR/YfhF:Iron-sulphur cluster assembly protein IscA 1216 58.43 0 1396860..1397381 + 173 161486736 hscB Psyr_1240 - co-chaperone HscB 1217 61.94 0 1397426..1399288 + 620 66044489 hscA Psyr_1241 - chaperone protein HscA 1218 58.77 0 1399292..1399633 + 113 66044490 - Psyr_1242 - ferredoxin, 2Fe-2S type 1219 55.72 0 1399648..1399848 + 66 66044491 - Psyr_1243 - hypothetical protein 1220 56.57 0 1399945..1400370 + 141 66044492 - Psyr_1244 - nucleoside-diphosphate kinase 1221 57.79 0 1400404..1401552 + 382 66044493 - Psyr_1245 - hypothetical protein 1222 57.18 0 1401579..1402337 + 252 66044494 - Psyr_1246 - TPR repeat-containing protein 1223 62.09 0 1402337..1403341 + 334 66044495 - Psyr_1247 - hypothetical protein 1224 60.00 0 1403345..1404454 + 369 66044496 ispG Psyr_1248 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1225 60.70 0 1404477..1405766 + 429 66044497 hisS Psyr_1249 - histidyl-tRNA synthetase 1226 60.44 0 1405806..1406447 + 213 66044498 - Psyr_1250 - hypothetical protein 1227 61.08 0 1406449..1407594 + 381 66044499 - Psyr_1251 - quinoprotein 1228 60.35 0 1407732..1409204 + 490 66044500 engA Psyr_1252 - GTP-binding protein EngA 1229 59.70 0 1409314..1410462 + 382 66044501 - Psyr_1253 - putative aminotransferase 1230 60.48 0 1410450..1411241 + 263 66044502 - Psyr_1254 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1231 57.99 0 1411352..1411789 - 145 66044503 - Psyr_1255 - hypothetical protein 1232 59.89 0 1411859..1412728 - 289 66044504 - Psyr_1256 - carboxyphosphonoenolpyruvate phosphonomutase 1233 60.74 0 1413086..1414756 - 556 66044505 - Psyr_1257 - 2-isopropylmalate synthase 1234 61.70 0 1415130..1415954 - 274 66044506 - Psyr_1258 - peptidase M23B 1235 64.80 +1 1415962..1417353 - 463 66044507 xseA Psyr_1259 - exodeoxyribonuclease VII large subunit 1236 58.47 0 1417473..1418021 + 182 66044508 - Psyr_1260 - hypothetical protein 1237 60.14 0 1418116..1419585 + 489 66044509 - Psyr_1261 - inositol-5-monophosphate dehydrogenase 1238 61.09 0 1419709..1421286 + 525 66044510 guaA Psyr_1262 - bifunctional GMP synthase/glutamine amidotransferase protein 1239 51.67 -1 1421368..1426062 + 1564 66044511 - Psyr_1263 - ATPas 1240 53.29 -1 1426659..1427144 + 161 66044512 - Psyr_1264 - hypothetical protein 1241 56.95 0 1427595..1429571 + 658 66044513 - Psyr_1265 - hypothetical protein 1242 61.64 0 1429748..1431121 + 457 66044514 - Psyr_1266 - twin-arginine translocation pathway signal 1243 64.12 +1 1431121..1431630 + 169 66044515 - Psyr_1267 - cytidine/deoxycytidylate deaminase, zinc-binding region 1244 58.65 0 1431627..1433123 - 498 66044516 - Psyr_1268 - extracellular solute-binding protein 1245 61.77 0 1433337..1437233 + 1298 66044517 - Psyr_1269 - phosphoribosylformylglycinamidine synthase 1246 59.62 0 1437239..1437550 + 103 66044518 - Psyr_1270 - hypothetical protein 1247 54.96 -1 1437672..1438235 - 187 66044519 - Psyr_1271 - ErfK/YbiS/YcfS/YnhG 1248 59.24 0 1438297..1438848 - 183 66044520 - Psyr_1272 - NUDIX hydrolase 1249 60.30 0 1438999..1439595 + 198 66044521 - Psyr_1273 - NUDIX hydrolase 1250 57.14 0 1439665..1440189 + 174 66044522 - Psyr_1274 - hexapaptide repeat-containing transferase 1251 62.56 0 1440189..1440407 + 72 66044523 - Psyr_1275 - hypothetical protein 1252 59.62 0 1441772..1442239 + 155 66044524 - Psyr_1276 - hypothetical protein 1253 62.44 0 1442343..1443524 + 393 66044525 purT Psyr_1277 - phosphoribosylglycinamide formyltransferase 2 1254 62.95 0 1443602..1444972 - 456 66044526 - Psyr_1278 - citrate-proton symport 1255 58.65 0 1445063..1446310 - 415 66044527 - Psyr_1279 - CBS:transporter-associated region 1256 58.60 0 1446323..1447177 - 284 66044528 - Psyr_1280 - cytochrome c assembly protein 1257 60.49 0 1447349..1448725 + 458 66044529 - Psyr_1281 - Signal recognition particle protein 1258 57.36 0 1448973..1449230 + 85 66044530 rpsP Psyr_1282 - 30S ribosomal protein S16 1259 53.89 -1 1449236..1449775 + 179 66044531 rimM Psyr_1283 - 16S rRNA-processing protein 1260 56.71 0 1449781..1450533 + 250 66044532 trmD Psyr_1284 - tRNA (guanine-N(1)-)-methyltransferase 1261 52.14 -1 1450578..1450928 + 116 66044533 rplS Psyr_1285 - 50S ribosomal protein L19 1262 62.21 0 1451032..1451928 + 298 66044534 xerD Psyr_1286 - site-specific tyrosine recombinase XerD 1263 48.87 -2 1452259..1452657 + 132 66044535 - Psyr_1287 - hypothetical protein 1264 48.55 -2 1453055..1453777 + 240 66044536 - Psyr_1288 - hypothetical protein 1265 59.38 0 1453992..1454732 + 246 66044537 - Psyr_1289 - glutaredoxin 1266 58.55 0 1454782..1456173 + 463 66044538 - Psyr_1290 - homoserine dehydrogenase 1267 58.79 0 1456278..1457687 + 469 66044539 - Psyr_1291 - threonine synthase 1268 60.11 0 1457808..1461437 + 1209 66044540 - Psyr_1292 - PAS 1269 61.23 0 1461470..1462831 + 453 66044541 - Psyr_1293 - EAL:response regulator receiver 1270 61.54 0 1462804..1463466 - 220 66044542 - Psyr_1294 - LuxR response regulator receiver 1271 58.25 0 1463756..1464052 + 98 66044543 - Psyr_1295 - hypothetical protein 1272 59.04 0 1464224..1465102 - 292 66044544 - Psyr_1296 - hypothetical protein 1273 58.08 0 1465245..1465931 + 228 66044545 - Psyr_1297 - YaeQ 1274 62.88 0 1465993..1467708 + 571 66044546 - Psyr_1298 - RecJ exonuclease 1275 62.87 0 1467821..1468927 + 368 66044547 - Psyr_1299 - NADH:flavin oxidoreductase/NADH oxidase 1276 59.77 0 1468991..1471078 - 695 66044548 - Psyr_1300 - PAS 1277 61.45 0 1471377..1472123 + 248 66044549 - Psyr_1301 - hypothetical protein 1278 60.69 0 1472181..1478153 - 1990 66044550 - Psyr_1302 - leucine-rich repeat-containing protein 1279 61.31 0 1478451..1480073 + 540 66044551 - Psyr_1303 - histidine kinase, HAMP region: chemotaxis sensory transducer 1280 61.08 0 1480081..1480617 + 178 66044552 - Psyr_1304 - CheW-like protein 1281 61.90 0 1480614..1481894 + 426 66044553 - Psyr_1305 - protein-glutamate O-methyltransferase 1282 63.77 +1 1481894..1482583 + 229 66044554 - Psyr_1306 - CheW-like protein 1283 62.53 0 1482580..1484949 + 789 66044555 - Psyr_1307 - response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt 1284 62.91 0 1484946..1485956 + 336 66044556 - Psyr_1308 - chemotaxis-specific methylesterase 1285 61.09 0 1486002..1487006 + 334 66044557 - Psyr_1309 - GGDEF 1286 61.31 0 1487230..1488219 + 329 66044558 - Psyr_1310 - peptide chain release factor 2 1287 60.01 0 1488289..1489791 + 500 66044559 lysS Psyr_1311 - lysyl-tRNA synthetase 1288 59.64 0 1489883..1490608 + 241 66044560 - Psyr_1312 - regulatory protein, TetR 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0