version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1085 63.25 0 1253132..1254097 - 321 66044357 - Psyr_1106 - FecR protein 1086 58.16 0 1254157..1254720 - 187 66044358 - Psyr_1107 - sigma-70 region 2 1087 59.58 0 1254858..1255859 - 333 66044359 - Psyr_1108 - glyceraldehyde-3-phosphate dehydrogenase 1088 61.08 0 1256079..1257905 + 608 66044360 - Psyr_1109 - phosphogluconate dehydratase 1089 62.53 0 1257902..1258867 + 321 66044361 glk Psyr_1110 - glucokinase 1090 61.38 0 1258918..1259655 + 245 66044362 - Psyr_1111 - response regulator receiver:transcriptional regulatory protein, C-terminal 1091 62.19 0 1259672..1261123 + 483 66044363 - Psyr_1112 - sensor histidine kinase 1092 58.49 0 1261293..1262588 + 431 66044364 - Psyr_1113 - extracellular solute-binding protein 1093 59.19 0 1262693..1263601 + 302 66044365 - Psyr_1114 - binding-protein dependent transport system inner membrane protein 1094 56.97 0 1263594..1264439 + 281 66044366 - Psyr_1115 - binding-protein dependent transport system inner membrane protein 1095 59.49 0 1264442..1265611 + 389 66044367 - Psyr_1116 - ABC transporter:TOBE 1096 57.27 0 1265737..1267098 + 453 66044368 - Psyr_1117 - carbohydrate-selective porin OprB 1097 64.38 +1 1267208..1268083 + 291 66044369 - Psyr_1118 - aldose 1-epimerase 1098 60.21 0 1268157..1269023 - 288 66044370 - Psyr_1119 - DNA-binding transcriptional regulator HexR 1099 58.91 0 1269242..1270711 + 489 66044371 - Psyr_1120 - glucose-6-phosphate 1-dehydrogenase 1100 65.13 +1 1270698..1271411 + 237 66044372 - Psyr_1121 - 6-phosphogluconolactonase 1101 62.52 0 1271448..1272122 + 224 66044373 - Psyr_1122 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1102 55.83 0 1272250..1272489 - 79 66044374 - Psyr_1123 - hypothetical protein 1103 53.08 -1 1272708..1273178 + 156 66044375 - Psyr_1124 - hypothetical protein 1104 58.43 0 1273249..1274778 - 509 66044376 - Psyr_1125 - GGDEF 1105 61.25 0 1274985..1276349 - 454 66044377 - Psyr_1126 - heavy metal sensor kinase 1106 62.09 0 1276339..1277016 - 225 66044378 - Psyr_1127 - heavy metal response regulator 1107 62.96 0 1277027..1280131 - 1034 66044379 - Psyr_1128 - acriflavin resistance protein 1108 62.21 0 1280128..1281294 - 388 66044380 - Psyr_1129 - secretion protein HlyD 1109 53.54 -1 1281587..1281967 + 126 66044381 - Psyr_1130 - hypothetical protein 1110 57.09 0 1282298..1282882 + 194 66044382 - Psyr_1131 - fimbrial protein 1111 55.60 0 1282904..1283698 + 264 66044383 - Psyr_1132 - pili assembly chaperone: pili assembly chaperone 1112 62.84 0 1283830..1286364 + 844 66044384 - Psyr_1133 - fimbrial biogenesis outer membrane usher protein 1113 64.12 +1 1286361..1287146 + 261 66044385 - Psyr_1134 - pili assembly chaperone 1114 57.46 0 1287148..1288146 + 332 66044386 - Psyr_1135 - hypothetical protein 1115 60.44 0 1288240..1288464 + 74 66044387 - Psyr_1136 - hypothetical protein 1116 60.05 0 1288482..1289237 - 251 66044388 - Psyr_1137 - hypothetical protein 1117 60.39 0 1289354..1289815 - 153 66044389 - Psyr_1138 - GCN5-related N-acetyltransferase 1118 59.53 0 1289881..1290777 - 298 66044390 - Psyr_1139 - response regulator receiver:CheW-like protein 1119 59.61 0 1291384..1291893 + 169 66044391 - Psyr_1140 - disulfide bond formation protein B 1120 54.46 -1 1292357..1293298 + 313 66044392 - Psyr_1141 - cytochrome o ubiquinol oxidase subunit II 1121 57.72 0 1293302..1295314 + 670 66044393 - Psyr_1142 - cytochrome-c oxidase 1122 57.35 0 1295318..1295950 + 210 66044394 - Psyr_1143 - cytochrome c oxidase, subunit III 1123 52.25 -1 1295950..1296282 + 110 66044395 - Psyr_1144 - cytochrome C oxidase subunit IV 1124 55.97 0 1296293..1297180 + 295 66044396 - Psyr_1145 - protoheme IX farnesyltransferase 1125 54.35 -1 1297436..1298320 + 294 66044397 - Psyr_1146 - glycosyl transferase family protein 1126 56.23 0 1298359..1299000 + 213 66044398 - Psyr_1147 - acetyltransferase 1127 59.12 0 1299152..1300171 + 339 66044399 - Psyr_1148 - branched-chain amino acid aminotransferase 1128 59.21 0 1300228..1301220 - 330 66044400 - Psyr_1149 - hypothetical protein 1129 58.39 0 1301387..1303042 - 551 66044401 - Psyr_1150 - chemotaxis sensory transducer 1130 58.21 0 1303150..1303941 - 263 66044402 - Psyr_1151 - prephenate dehydratase 1131 57.28 0 1304087..1304395 + 102 66044403 - Psyr_1152 - regulatory protein, ArsR 1132 60.63 0 1304459..1305469 + 336 66044404 - Psyr_1153 - zinc-containing alcohol dehydrogenase superfamily protein 1133 60.69 0 1305713..1306231 + 172 66044405 - Psyr_1154 - copper/Zinc superoxide dismutase 1134 57.14 0 1306345..1306554 - 69 66044406 - Psyr_1155 - hypothetical protein 1135 56.78 0 1306913..1308652 + 579 66044407 - Psyr_1156 - hypothetical protein 1136 57.76 0 1308739..1309995 - 418 66044408 - Psyr_1157 - PAS:GGDEF 1137 62.87 0 1310315..1311685 + 456 66044409 - Psyr_1158 - gluconate transporter 1138 57.32 0 1311737..1313983 - 748 66044410 - Psyr_1159 - PAS:GGDEF 1139 49.93 -2 1314808..1315554 + 248 66044411 - Psyr_1160 - hypothetical protein 1140 58.37 0 1315662..1316348 - 228 66044412 - Psyr_1161 - transcriptional regulator GntR 1141 62.88 0 1316345..1316740 - 131 66044413 - Psyr_1162 - hypothetical protein 1142 63.13 0 1316740..1317417 - 225 66044414 - Psyr_1163 - isochorismatase hydrolase 1143 64.13 +1 1317414..1318949 - 511 66044415 - Psyr_1164 - ABC transporter 1144 63.90 +1 1318952..1319638 - 228 66044416 - Psyr_1165 - isochorismatase hydrolase 1145 63.23 0 1319643..1320659 - 338 66044417 amiF Psyr_1166 - formamidase 1146 66.78 +1 1320687..1321607 - 306 66044418 - Psyr_1167 - inner-membrane translocator 1147 66.04 +1 1321600..1322709 - 369 66044419 - Psyr_1168 - inner-membrane translocator 1148 60.09 0 1322719..1323828 - 369 66044420 - Psyr_1169 - twin-arginine translocation pathway signal 1149 64.03 +1 1323843..1325663 - 606 66044421 - Psyr_1170 - amidase 1150 58.27 0 1325875..1326255 - 126 66044422 - Psyr_1171 - hypothetical protein 1151 55.83 0 1326317..1326796 - 159 66044423 - Psyr_1172 - regulatory proteins, AsnC/Lrp 1152 56.20 0 1326969..1327589 + 206 66044424 - Psyr_1173 - lysine exporter protein LysE/YggA 1153 60.83 0 1327638..1329059 - 473 66044425 - Psyr_1174 - sugar transporter 1154 58.53 0 1329470..1330096 + 208 66044426 - Psyr_1175 - glutathione S-transferase 1155 50.66 -2 1330328..1331164 - 278 66044427 - Psyr_1176 - integrase catalytic subunit 1156 52.59 -1 1331164..1331703 - 179 66044428 - Psyr_1177 - ISPsy9, transposase OrfA 1157 57.41 0 1332053..1332214 - 53 66044429 - Psyr_1178 - hypothetical protein 1158 63.12 0 1332278..1334023 - 581 66044430 - Psyr_1179 - OPT superfamily oligopeptide transporter 1159 55.56 0 1334228..1334713 - 161 66044431 - Psyr_1180 - hypothetical protein 1160 56.25 0 1334788..1335075 - 95 66044432 - Psyr_1181 - hypothetical protein 1161 57.46 0 1335471..1336415 - 314 66044433 - Psyr_1182 - hypothetical protein 1162 61.91 0 1336758..1338209 + 483 66044434 - Psyr_1183 - type III effector HopAA1 1163 59.13 0 1338293..1339618 - 441 66044435 - Psyr_1184 - type III helper protein HrpW1 1164 57.98 0 1339922..1340416 + 164 66044436 - Psyr_1185 - effector locus protein 1165 62.77 0 1340413..1342569 + 718 66044437 - Psyr_1186 - type III effector HopM1 1166 59.23 0 1342667..1343056 + 129 66044438 - Psyr_1187 - DspFAvrF 1167 60.03 0 1343119..1348479 - 1786 66044439 AvrE1 Psyr_1188 - type III effector protein AvrE1 1168 63.45 0 1348699..1350222 + 507 66044440 - Psyr_1189 - SLT:MLTD_N 1169 57.99 0 1351297..1352241 + 314 66044441 HrpR Psyr_1190 - type III transcriptional regulator HrpR 1170 60.95 0 1352287..1353195 + 302 66044442 HrpS Psyr_1191 - type III transcriptional regulator HrpS 1171 58.10 0 1353288..1353614 + 108 66044443 HrpA2 Psyr_1192 - type III helper protein HrpA2 1172 60.76 0 1353667..1354698 + 343 66044444 - Psyr_1193 - type III helper protein HrpZ1 1173 58.93 0 1354726..1355100 + 124 66044445 HrpB Psyr_1194 - type III secretion protein HrpB 1174 60.47 0 1355109..1355915 + 268 66044446 HrcJ Psyr_1195 - type III secretion protein HrcJ 1175 63.64 +1 1355915..1356442 + 175 66044447 - Psyr_1196 - type III secretion protein HrpD 1176 62.20 0 1356477..1357058 + 193 66044448 HrpE Psyr_1197 - type III secretion protein HrpE 1177 52.44 -1 1357142..1357366 + 74 66044449 HrpF Psyr_1198 - type III secretion protein HrpF 1178 63.72 +1 1357344..1357784 + 146 66044450 - Psyr_1199 - type III secretion protein HrpG 1179 60.29 0 1357786..1359888 + 700 66044451 HrcC Psyr_1200 - outer-membrane type III secretion protein HrcC 1180 60.29 0 1359885..1360088 + 67 66044452 - Psyr_1201 - type III secretion protein HrpT 1181 57.76 0 1360091..1360438 + 115 66044453 - Psyr_1202 - negative regulator of hrp expression HrpV 1182 46.11 -2 1361041..1361901 - 286 66044454 - Psyr_1203 - hypothetical protein 1183 49.12 -2 1361898..1363601 - 567 66044455 - Psyr_1204 - hypothetical protein 1184 57.31 0 1364133..1365212 - 359 66044456 HrcU Psyr_1205 - type III secretion protein HrcU 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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