version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 59 63.05 0 58285..59529 - 414 66043330 - Psyr_0059 - HemY, N-terminal:HemY, N-terminal:HemY, N-terminal 60 63.18 0 59526..60701 - 391 66043331 - Psyr_0060 - hypothetical protein 61 63.82 +1 60701..61474 - 257 66043332 - Psyr_0061 - uroporphyrinogen-III synthase 62 63.80 +1 61471..62412 - 313 66043333 hemC Psyr_0062 - porphobilinogen deaminase 63 61.85 0 62645..63391 - 248 66043334 - Psyr_0063 - response regulator receiver:LytTr DNA-binding region 64 58.54 0 63388..64470 - 360 66043335 - Psyr_0064 - histidine kinase internal region 65 62.87 0 64605..65999 + 464 66043336 - Psyr_0065 - argininosuccinate lyase 66 63.53 0 66405..67646 + 413 66043337 - Psyr_0066 - bifunctional spore maturation protein, fused SpmA/SpmB 67 61.56 0 67651..68844 - 397 66043338 - Psyr_0067 - hypothetical protein 68 61.37 0 68941..70317 - 458 66043339 - Psyr_0068 - insulinase-like:peptidase M16, C-terminal 69 62.37 0 70375..72027 - 550 66043340 - Psyr_0069 - Na+/Pi-cotransporter:Na/Pi cotransporter II-related 70 60.67 0 72227..73060 + 277 66043341 - Psyr_0070 - hypothetical protein 71 62.27 0 72996..74972 - 658 66043342 - Psyr_0071 - histidine kinase, HAMP region: chemotaxis sensory transducer 72 61.13 0 75159..76079 - 306 66043343 - Psyr_0072 - regulatory protein, LysR:LysR, substrate-binding 73 64.06 +1 76238..77620 + 460 66043344 - Psyr_0073 - multidrug efflux protein NorA 74 63.66 +1 77633..79297 - 554 66043345 - Psyr_0074 - GGDEF 75 60.55 0 79502..81511 + 669 66043346 - Psyr_0075 - ATP-dependent DNA helicase RepA 76 59.82 0 81563..82132 + 189 66043347 - Psyr_0076 - xanthine phosphoribosyltransferase 77 64.09 +1 82724..84043 - 439 66043348 - Psyr_0077 - helix-turn-helix, Fis-type 78 61.36 0 84310..85194 + 294 66043349 - Psyr_0078 - Beta-lactamase-like 79 64.83 +1 85222..86475 + 417 66043350 - Psyr_0079 - hypothetical protein 80 65.68 +1 86468..87280 + 270 66043351 - Psyr_0080 - hypothetical protein 81 62.69 0 87481..88461 - 326 66043352 - Psyr_0081 - ABC transporter 82 61.86 0 88464..89336 - 290 66043353 - Psyr_0082 - binding-protein dependent transport system inner membrane protein 83 63.50 0 89350..90171 - 273 66043354 - Psyr_0083 - binding-protein dependent transport system inner membrane protein 84 59.05 0 90266..91276 - 336 66043355 - Psyr_0084 - extracellular solute-binding protein 85 52.22 -1 91428..91607 - 59 66043356 - Psyr_0085 - hypothetical protein 86 60.68 0 91808..93727 - 639 66043357 - Psyr_0086 - PAS:GGDEF 87 59.75 0 93880..95064 + 394 66043358 - Psyr_0087 - Fatty acid desaturase 88 61.01 0 95185..96192 + 335 66043359 - Psyr_0088 - PAS:GGDEF 89 64.22 +1 96943..98331 - 462 66043360 - Psyr_0089 - response regulator receiver 90 60.89 0 98488..99768 - 426 66043361 - Psyr_0090 - 4-aminobutyrate aminotransferase 91 62.37 0 99948..101390 - 480 66043362 gabD Psyr_0091 - succinate-semialdehyde dehydrogenase I 92 60.53 0 101677..102312 - 211 66043363 - Psyr_0092 - lysine exporter protein LysE/YggA 93 63.32 0 102358..103761 - 467 66043364 - Psyr_0093 - flavoprotein monooxygenase 94 55.46 0 103896..104600 + 234 66043365 - Psyr_0094 - hypothetical protein 95 56.59 0 104951..106369 - 472 66043366 - Psyr_0095 - transposase IS4 96 55.79 0 106580..107563 - 327 66043367 - Psyr_0096 - transposase IS4 97 39.53 -2 108211..109452 + 413 66043368 - Psyr_0097 - hypothetical protein 98 43.22 -2 109452..111323 + 623 66043369 - Psyr_0098 - hypothetical protein 99 43.81 -2 111332..111541 + 69 66043370 - Psyr_0099 - hypothetical protein 100 49.06 -2 112435..112968 - 177 66043371 - Psyr_0100 - hypothetical protein 101 50.30 -2 112987..113487 - 166 66043372 - Psyr_0101 - hypothetical protein 102 42.71 -2 113906..114502 - 198 66043373 - Psyr_0102 - hypothetical protein 103 50.26 -2 114514..114891 - 125 66043374 - Psyr_0103 - hypothetical protein 104 46.68 -2 115713..116873 + 386 66043375 - Psyr_0104 - hypothetical protein 105 56.69 0 116991..117812 - 273 66043376 - Psyr_0105 - integrase catalytic subunit 106 57.00 0 117869..118168 - 99 66043377 - Psyr_0106 - transposase IS3/IS911 107 52.46 -1 118370..118735 + 121 66043378 - Psyr_0107 - hypothetical protein 108 58.06 0 118946..120304 + 452 66043379 - Psyr_0108 - major facilitator transporter 109 42.02 -2 120719..121144 + 141 66043380 - Psyr_0109 - hypothetical protein 110 51.81 -1 121508..122362 + 284 66043381 - Psyr_0110 - hypothetical protein 111 47.92 -2 122362..122793 + 143 66043382 - Psyr_0111 - hypothetical protein 112 50.52 -2 122810..123193 - 127 66043383 - Psyr_0112 - hypothetical protein 113 47.76 -2 123930..124664 - 244 66043384 - Psyr_0113 - hypothetical protein 114 54.75 -1 125003..125455 + 150 66043385 - Psyr_0114 - hypothetical protein 115 61.57 0 125598..126362 + 254 66043386 - Psyr_0115 - hypothetical protein 116 53.40 -1 126577..127209 - 210 66043387 - Psyr_0116 - lysine exporter protein LysE/YggA 117 58.76 0 127274..128437 - 387 66043388 - Psyr_0117 - aminotransferase, class I and II 118 53.09 -1 128434..129486 - 350 66043389 - Psyr_0118 - hypothetical protein 119 58.50 0 130166..130936 + 256 66043390 - Psyr_0120 - Short-chain dehydrogenase/reductase SDR 120 53.65 -1 131018..131647 - 209 66043391 - Psyr_0121 - regulatory protein, TetR 121 51.90 -1 131737..132393 + 218 66043392 - Psyr_0122 - NAD(P)H dehydrogenase (quinone) 122 55.84 0 132718..133539 + 273 66043393 - Psyr_0123 - Short-chain dehydrogenase/reductase SDR 123 61.43 0 133779..135326 + 515 66043394 - Psyr_0124 - hemolysin-type calcium-binding region 124 53.50 -1 135597..135953 + 118 66043395 - Psyr_0125 - hypothetical protein 125 53.97 -1 135970..136410 + 146 66043396 - Psyr_0126 - hypothetical protein 126 52.97 -1 136494..136931 + 145 66043397 - Psyr_0127 - glutathione-dependent formaldehyde-activating, GFA 127 53.01 -1 137161..137526 + 121 66043398 - Psyr_0128 - hypothetical protein 128 57.33 0 137656..137955 + 99 66043399 - Psyr_0129 - hypothetical protein 129 53.69 -1 138083..138991 - 302 66043400 - Psyr_0130 - hypothetical protein 130 58.37 0 139587..140261 + 224 66043401 - Psyr_0131 - HAD family hydrolase 131 62.25 0 140362..140610 - 82 66043402 - Psyr_0132 - hypothetical protein 132 60.72 0 140694..141164 - 156 66043403 - Psyr_0133 - helix-turn-helix, Fis-type 133 62.54 0 142016..143203 + 395 66043404 - Psyr_0134 - aminotransferase, class V 134 64.48 +1 144401..145225 + 274 66043405 - Psyr_0135 - TonB, C-terminal 135 63.56 +1 145279..145986 + 235 66043406 - Psyr_0136 - MotA/TolQ/ExbB proton channel 136 58.46 0 145986..146387 + 133 66043407 - Psyr_0137 - biopolymer transport protein ExbD/TolR 137 60.92 0 146598..149312 + 904 66043408 - Psyr_0138 - TonB-dependent receptor:TonB-dependent receptor 138 62.26 0 149457..151340 + 627 66043409 - Psyr_0139 - extracellular solute-binding protein 139 61.70 0 151342..152409 + 355 66043410 - Psyr_0140 - binding-protein dependent transport system inner membrane protein 140 63.83 +1 152409..153431 + 340 66043411 - Psyr_0141 - binding-protein dependent transport system inner membrane protein 141 63.13 0 153433..155016 + 527 66043412 - Psyr_0142 - ABC transporter 142 62.66 0 155026..156546 - 506 66043413 - Psyr_0143 - chemotaxis sensory transducer 143 53.99 -1 157030..157518 - 162 66043414 - Psyr_0144 - regulatory proteins, AsnC/Lrp 144 62.52 0 157566..158240 - 224 66043415 - Psyr_0145 - hypothetical protein 145 62.38 0 158304..159608 - 434 66043416 - Psyr_0146 - 4-aminobutyrate aminotransferase 146 62.26 0 159893..160822 + 309 66043417 - Psyr_0147 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 147 58.75 0 160872..161111 + 79 66043418 - Psyr_0148 - hypothetical protein 148 64.06 +1 161189..162646 - 485 66043419 - Psyr_0149 - succinic semialdehyde dehydrogenase 149 63.99 +1 162761..163918 - 385 66043420 - Psyr_0150 - acetylornithine deacetylase 150 62.74 0 163915..165084 - 389 66043421 - Psyr_0151 - FAD dependent oxidoreductase 151 64.96 +1 165081..166490 - 469 66043422 - Psyr_0152 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region 152 64.42 +1 166469..166780 - 103 66043423 - Psyr_0153 - hypothetical protein 153 64.98 +1 166777..168618 - 613 66043424 - Psyr_0154 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 154 64.51 +1 168620..169498 - 292 66043425 - Psyr_0155 - binding-protein dependent transport system inner membrane protein 155 61.65 0 169495..170451 - 318 66043426 - Psyr_0156 - binding-protein dependent transport system inner membrane protein 156 61.54 0 170483..172120 - 545 66043427 - Psyr_0157 - twin-arginine translocation pathway signal 157 62.58 0 172214..173509 - 431 66043428 - Psyr_0158 - FAD dependent oxidoreductase 158 56.50 0 173555..174223 - 222 66043429 - Psyr_0159 - HAD family hydrolase 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.