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Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1007 52.87 -1 1156731..1157288 + 185 66044279 - Psyr_1026 - hypothetical protein 1008 61.94 0 1157518..1158321 - 267 66044280 - Psyr_1027 - hypothetical protein 1009 62.20 0 1158403..1159275 - 290 66044281 - Psyr_1028 - hypothetical protein 1010 62.90 0 1159307..1161271 - 654 66044282 - Psyr_1029 - peptidase aspartic, active site 1011 60.30 0 1161268..1163388 - 706 66044283 nfrB Psyr_1030 - bacteriophage N4 adsorption protein B 1012 64.19 +1 1163401..1165617 - 738 66044284 - Psyr_1031 - hypothetical protein 1013 61.47 0 1165785..1167035 - 416 66044285 - Psyr_1032 - UDP-N-acetylglucosamine 2-epimerase 1014 58.80 0 1167739..1168005 - 88 66044286 - Psyr_1033 - YebG 1015 56.24 0 1168417..1168905 + 162 66044287 - Psyr_1034 - phosphate-starvation-inducible E 1016 60.66 0 1168967..1169299 - 110 66044288 - Psyr_1035 - putative lipoprotein 1017 57.66 0 1169564..1169896 - 110 66044289 - Psyr_1036 - hypothetical protein 1018 55.24 0 1170795..1171223 - 142 66044290 - Psyr_1037 - ribosomal subunit interface protein, putative 1019 62.41 0 1171497..1173845 - 782 66044291 - Psyr_1038 - TonB-dependent siderophore receptor 1020 64.52 +1 1174500..1175477 - 325 66044292 - Psyr_1039 - FecR protein 1021 62.70 0 1175474..1175977 - 167 66044293 - Psyr_1040 - RNA polymerase sigma factor 1022 63.58 +1 1176188..1177063 - 291 66044294 - Psyr_1041 - helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation 1023 61.46 0 1177200..1178102 + 300 66044295 - Psyr_1042 - hypothetical protein 1024 62.46 0 1178149..1179123 - 324 66044296 - Psyr_1043 - 2-hydroxyacid dehydrogenase 1025 61.06 0 1179211..1180209 - 332 66044297 - Psyr_1044 - regulatory protein, LysR:LysR, substrate-binding 1026 65.52 +1 1180342..1181826 + 494 66044298 - Psyr_1045 - RND efflux system, outer membrane lipoprotein, NodT 1027 63.15 0 1181823..1184012 + 729 66044299 - Psyr_1046 - fusaric acid resistance protein region 1028 59.80 0 1183999..1184202 + 67 66044300 - Psyr_1047 - hypothetical protein 1029 61.32 0 1184228..1185088 + 286 66044301 - Psyr_1048 - secretion protein HlyD 1030 63.00 0 1185160..1185978 - 272 66044302 - Psyr_1049 - short chain dehydrogenase 1031 62.37 0 1185994..1186458 - 154 66044303 - Psyr_1050 - hypothetical protein 1032 56.03 0 1186670..1189453 + 927 66044304 - Psyr_1051 - YD repeat-containing protein 1033 59.85 0 1189612..1191063 - 483 66044305 - Psyr_1052 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1034 60.09 0 1191183..1191851 - 222 66044306 - Psyr_1053 - alginate biosynthesis protein AlgF 1035 60.29 0 1191864..1193039 - 391 66044307 - Psyr_1054 - alginate biosynthesis protein AlgJ 1036 58.51 0 1193050..1194606 - 518 66044308 - Psyr_1055 - membrane bound O-acyl transferase, MBOAT 1037 58.66 0 1194797..1195933 - 378 66044309 algL Psyr_1056 - poly(beta-D-mannuronate) lyase 1038 58.61 0 1195942..1197381 - 479 66044310 - Psyr_1057 - alginate biosynthesis protein AlgX 1039 58.47 0 1197396..1199006 - 536 66044311 - Psyr_1058 - parallel beta-helix repeat-containing protein 1040 62.09 0 1199033..1200517 - 494 66044312 - Psyr_1059 - alginate biosynthesis protein AlgE 1041 62.28 0 1200514..1201926 - 470 66044313 - Psyr_1060 - Sel1 repeat-containing protein 1042 61.04 0 1201929..1203101 - 390 66044314 - Psyr_1061 - alginate biosynthesis protein Alg44 1043 58.97 0 1203142..1204623 - 493 66044315 - Psyr_1062 - alginate biosynthesis protein Alg8 1044 57.33 0 1204724..1206040 - 438 66044316 - Psyr_1063 - GDP-mannose 6-dehydrogenase 1045 59.36 0 1206856..1207635 - 259 66044317 - Psyr_1064 - hypothetical protein 1046 60.90 0 1207838..1209016 + 392 66044318 - Psyr_1065 - polysaccharide deacetylase 1047 58.42 0 1209311..1210705 + 464 66044319 - Psyr_1066 - PhoH-like protein 1048 60.91 0 1211047..1211532 + 161 66044320 moaC Psyr_1067 - molybdenum cofactor biosynthesis protein C 1049 60.16 0 1211529..1211774 + 81 66044321 - Psyr_1068 - molybdopterin converting factor, subunit 1:MoaD, 1050 60.22 0 1211777..1212226 + 149 66044322 - Psyr_1069 - molybdopterin biosynthesis MoaE 1051 61.36 0 1212230..1213681 - 483 161486737 - Psyr_1070 - ATP-dependent RNA helicase RhlB 1052 60.76 0 1213803..1214462 - 219 66044324 - Psyr_1071 - carboxylesterase 1053 58.31 0 1214948..1215976 + 342 66044325 - Psyr_1072 - extracellular solute-binding protein 1054 58.38 0 1216047..1217228 + 393 66044326 - Psyr_1073 - amino acid ABC transporter permease 1055 59.74 0 1217239..1218336 + 365 66044327 - Psyr_1074 - amino acid ABC transporter permease 1056 57.52 0 1218347..1219111 + 254 66044328 - Psyr_1075 - ABC transporter 1057 65.14 +1 1219265..1220509 + 414 66044329 - Psyr_1076 - cyanate transport system protein 1058 60.49 0 1220552..1221490 - 312 66044330 - Psyr_1077 - isoflavone reductase 1059 59.01 0 1221539..1221982 + 147 66044331 - Psyr_1078 - hypothetical protein 1060 58.54 0 1222071..1222562 + 163 66044332 - Psyr_1079 - hypothetical protein 1061 61.40 0 1222555..1222896 + 113 66044333 - Psyr_1080 - GIY-YIG nuclease superfamily protein 1062 59.81 0 1222961..1223893 + 310 66044334 - Psyr_1081 - hypothetical protein 1063 58.12 0 1223955..1224305 - 116 66044335 - Psyr_1082 - glutaredoxin 1064 58.98 0 1224311..1225312 - 333 66044336 ndpA Psyr_1083 - nucleoid-associated protein NdpA 1065 51.42 -1 1225706..1225987 + 93 66044337 - Psyr_1084 - histone-like DNA-binding protein 1066 62.41 0 1226571..1227557 - 328 66044338 - Psyr_1085 - putative SAM-dependent methyltransferase 1067 60.87 0 1227714..1230560 - 948 66044339 valS Psyr_1086 - valyl-tRNA synthetase 1068 60.46 0 1231728..1232162 - 144 66044340 - Psyr_1089 - hypothetical protein 1069 61.77 0 1232170..1232598 - 142 66044341 - Psyr_1090 - DNA polymerase III subunit chi 1070 61.77 0 1232656..1234146 - 496 66044342 pepA Psyr_1091 - leucyl aminopeptidase 1071 60.82 0 1234466..1235593 + 375 66044343 - Psyr_1092 - permease YjgP/YjgQ 1072 62.24 0 1235580..1236641 + 353 66044344 - Psyr_1093 - permease YjgP/YjgQ 1073 52.11 -1 1236770..1236982 - 70 66044345 - Psyr_1094 - cold-shock protein, DNA-binding 1074 61.07 0 1237394..1238518 - 374 66044346 - Psyr_1095 - glycine cleavage system T protein 1075 62.51 0 1238600..1241464 - 954 66044347 - Psyr_1096 - glycine dehydrogenase 1076 60.16 0 1241475..1241858 - 127 66044348 gcvH Psyr_1097 - glycine cleavage system protein H 1077 60.58 0 1242184..1244301 - 705 66044349 - Psyr_1098 - PAS:GGDEF 1078 59.49 0 1244311..1244700 - 129 66044350 - Psyr_1099 - response regulator receiver 1079 60.49 0 1244685..1246415 - 576 66044351 - Psyr_1100 - PAS 1080 61.56 0 1246586..1248094 - 502 66044352 - Psyr_1101 - helix-turn-helix, Fis-type 1081 57.98 0 1248790..1249146 - 118 66044353 - Psyr_1102 - hypothetical protein 1082 60.57 0 1249245..1249703 - 152 66044354 - Psyr_1103 - hypothetical protein 1083 63.25 0 1249700..1250314 - 204 66044355 - Psyr_1104 - Heme oxygenase 1084 61.98 0 1250431..1253010 - 859 66044356 - Psyr_1105 - TonB-dependent haemoglobin/transferrin/lactoferrin receptor:TonB-dependent haem/haemoglobin receptor 1085 63.25 0 1253132..1254097 - 321 66044357 - Psyr_1106 - FecR protein 1086 58.16 0 1254157..1254720 - 187 66044358 - Psyr_1107 - sigma-70 region 2 1087 59.58 0 1254858..1255859 - 333 66044359 - Psyr_1108 - glyceraldehyde-3-phosphate dehydrogenase 1088 61.08 0 1256079..1257905 + 608 66044360 - Psyr_1109 - phosphogluconate dehydratase 1089 62.53 0 1257902..1258867 + 321 66044361 glk Psyr_1110 - glucokinase 1090 61.38 0 1258918..1259655 + 245 66044362 - Psyr_1111 - response regulator receiver:transcriptional regulatory protein, C-terminal 1091 62.19 0 1259672..1261123 + 483 66044363 - Psyr_1112 - sensor histidine kinase 1092 58.49 0 1261293..1262588 + 431 66044364 - Psyr_1113 - extracellular solute-binding protein 1093 59.19 0 1262693..1263601 + 302 66044365 - Psyr_1114 - binding-protein dependent transport system inner membrane protein 1094 56.97 0 1263594..1264439 + 281 66044366 - Psyr_1115 - binding-protein dependent transport system inner membrane protein 1095 59.49 0 1264442..1265611 + 389 66044367 - Psyr_1116 - ABC transporter:TOBE 1096 57.27 0 1265737..1267098 + 453 66044368 - Psyr_1117 - carbohydrate-selective porin OprB 1097 64.38 +1 1267208..1268083 + 291 66044369 - Psyr_1118 - aldose 1-epimerase 1098 60.21 0 1268157..1269023 - 288 66044370 - Psyr_1119 - DNA-binding transcriptional regulator HexR 1099 58.91 0 1269242..1270711 + 489 66044371 - Psyr_1120 - glucose-6-phosphate 1-dehydrogenase 1100 65.13 +1 1270698..1271411 + 237 66044372 - Psyr_1121 - 6-phosphogluconolactonase 1101 62.52 0 1271448..1272122 + 224 66044373 - Psyr_1122 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1102 55.83 0 1272250..1272489 - 79 66044374 - Psyr_1123 - hypothetical protein 1103 53.08 -1 1272708..1273178 + 156 66044375 - Psyr_1124 - hypothetical protein 1104 58.43 0 1273249..1274778 - 509 66044376 - Psyr_1125 - GGDEF 1105 61.25 0 1274985..1276349 - 454 66044377 - Psyr_1126 - heavy metal sensor kinase 1106 62.09 0 1276339..1277016 - 225 66044378 - Psyr_1127 - heavy metal response regulator 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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