version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 918 51.56 -1 1019855..1020304 + 149 28868162 terB PSPTO_0942 - tellurium resistance protein TerB 919 56.04 0 1020331..1021365 + 344 28868163 terC PSPTO_0943 - tellurium resistance protein TerC 920 55.73 0 1021393..1021968 + 191 28868164 terD PSPTO_0944 - tellurium resistance protein TerD 921 56.82 0 1022006..1022584 + 192 28868165 terE PSPTO_0945 - tellurium resistance protein TerE 922 57.71 0 1022855..1024093 - 412 28868166 - PSPTO_0946 - tellurium resistance protein, putative 923 61.63 0 1024154..1024888 - 244 28868167 - PSPTO_0947 - hypothetical protein 924 61.60 0 1025270..1026118 - 282 28868168 nadC PSPTO_0948 - nicotinate-nucleotide pyrophosphorylase 925 59.13 0 1026472..1028727 + 751 28868169 - PSPTO_0949 - hypothetical protein 926 57.92 0 1029038..1029586 + 182 28868170 ampD PSPTO_0950 - N-acetyl-anhydromuranmyl-L-alanine amidase 927 62.49 0 1029602..1030438 + 278 28868171 - PSPTO_0951 - ampE protein 928 59.66 0 1030586..1031284 - 232 28868172 - PSPTO_0952 - TatD family hydrolase 929 60.04 0 1031386..1032381 - 331 28868173 - PSPTO_0953 - DNA-binding transcriptional regulator FruR 930 64.23 +1 1032736..1035603 + 955 28868174 - PSPTO_0954 - phosphoenolpyruvate-protein phosphotransferase,EI/HPr/EIIA components 931 63.91 +1 1035603..1036544 + 313 28868175 fruK PSPTO_0955 - 1-phosphofructokinase 932 61.99 0 1036557..1038311 + 584 28868176 - PSPTO_0956 - phosphotransferase system, fructose-specific IIBC component 933 63.61 +1 1038333..1039511 - 392 28868177 phbA-1 PSPTO_0957 - acetyl-CoA acetyltransferase 934 64.94 +1 1039650..1040516 - 288 28868178 - PSPTO_0958 - hypothetical protein 935 60.42 0 1040763..1042427 - 554 28868179 pgi PSPTO_0959 - glucose-6-phosphate isomerase 936 62.21 0 1042670..1043521 - 283 28868180 panC PSPTO_0960 - pantoate--beta-alanine ligase 937 62.05 0 1043518..1044318 - 266 28868181 panB PSPTO_0961 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 938 62.72 0 1044547..1045053 - 168 28868182 folK-2 PSPTO_0962 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 939 60.26 0 1045046..1046449 - 467 28868183 pcnB PSPTO_0963 - poly(A) polymerase 940 60.75 0 1047150..1048586 - 478 28868184 - PSPTO_0964 - sigma-54 dependent transcriptional regulator/response regulator 941 61.95 0 1048609..1051557 - 982 28868185 - PSPTO_0965 - sensor histidine kinase 942 53.11 -1 1051547..1051723 - 58 28868186 - PSPTO_0966 - hypothetical protein 943 61.71 0 1051822..1052709 - 295 28868187 - PSPTO_0967 - glutamyl-Q tRNA(Asp) synthetase 944 54.07 -1 1053296..1054756 - 486 28868188 - PSPTO_0968 - ISPsy6, transposase 945 55.33 0 1054836..1055276 - 146 28868189 dksA PSPTO_0969 - dnaK suppressor protein 946 61.13 0 1055626..1056798 + 390 28868190 - PSPTO_0970 - hypothetical protein 947 61.76 0 1056798..1057511 + 237 28868191 sfsA PSPTO_0971 - sugar fermentation stimulation protein A 948 58.86 0 1057534..1057866 - 110 28868192 - PSPTO_0972 - Rieske family iron-sulfur cluster-binding protein 949 62.44 0 1058084..1058863 + 259 28868193 deoC PSPTO_0973 - deoxyribose-phosphate aldolase 950 53.70 -1 1059152..1059259 + 35 28868194 - PSPTO_0974 - hypothetical protein 951 58.84 0 1059244..1059588 - 114 28868195 - PSPTO_0975 - pentapeptide repeat-containing protein 952 58.67 0 1059690..1061228 - 512 28868196 - PSPTO_0976 - hypothetical protein 953 59.39 0 1061359..1063680 + 773 28868197 - PSPTO_0977 - penicillin-binding protein 954 62.78 +1 1063668..1064438 + 256 28868198 - PSPTO_0978 - hypothetical protein 955 58.48 0 1064438..1064767 + 109 28868199 - PSPTO_0979 - hypothetical protein 956 61.94 0 1064777..1065220 - 147 28868200 - PSPTO_0980 - hypothetical protein 957 58.38 0 1065591..1067315 + 574 28868201 ilvB PSPTO_0981 - acetolactate synthase 3 catalytic subunit 958 58.74 0 1067318..1067809 + 163 28868202 ilvN PSPTO_0982 - acetolactate synthase 3 regulatory subunit 959 56.64 0 1067857..1068873 + 338 28868203 ilvC PSPTO_0983 - ketol-acid reductoisomerase 960 59.27 0 1069018..1069869 + 283 28868204 pssA-1 PSPTO_0984 - CDP-diacylglycerol--serine O-phosphatidyltransferase 961 58.38 0 1069934..1070947 + 337 28868205 - PSPTO_0985 - putative sulfite oxidase subunit YedY 962 56.24 0 1070947..1071579 + 210 28868206 - PSPTO_0986 - putative sulfite oxidase subunit YedZ 963 50.22 -2 1077352..1077582 + 76 28868207 - PSPTO_0987 - hypothetical protein 964 59.50 0 1077641..1080460 - 939 28868208 - PSPTO_0988 - hypothetical protein 965 61.02 0 1080457..1081164 - 235 28868209 - PSPTO_0989 - hypothetical protein 966 62.36 0 1081154..1082431 - 425 28868210 - PSPTO_0990 - hypothetical protein 967 65.30 +1 1082577..1083380 + 267 28868211 - PSPTO_0991 - hypothetical protein 968 56.14 0 1083373..1083828 + 151 28868212 rimI PSPTO_0992 - ribosomal-protein-alanine acetyltransferase 969 59.07 0 1083838..1084245 - 135 28868213 - PSPTO_0993 - hypothetical protein 970 59.31 0 1084494..1085132 + 212 28868214 - PSPTO_0994 - carbonic anhydrase 971 59.02 0 1085145..1086818 - 557 28868215 - PSPTO_0995 - methyl-accepting chemotaxis protein 972 60.61 0 1086926..1087585 - 219 28868216 - PSPTO_0996 - HD domain-containing protein 973 59.28 0 1087661..1089664 - 667 28868217 - PSPTO_0997 - acyltransferase family protein 974 54.93 0 1089883..1090257 + 124 28868218 - PSPTO_0998 - alkylphosphonate utilization operon protein PhnA, putative 975 61.36 0 1090603..1091826 + 407 28868219 - PSPTO_0999 - sugar efflux transporter 976 57.92 0 1091889..1092608 - 239 28868220 - PSPTO_1000 - CDP-alcohol phosphatidyltransferase family protein 977 59.23 0 1092695..1094710 - 671 28868221 - PSPTO_1001 - hypothetical protein 978 57.99 0 1096637..1097074 - 145 28868222 - PSPTO_1003 - acetyltransferase 979 56.76 0 1097150..1098391 - 413 28868223 - PSPTO_1004 - GGDEF domain-containing protein 980 53.87 -1 1098690..1099736 + 348 28868224 gmd PSPTO_1005 - GDP-mannose 4,6-dehydratase 981 56.86 0 1099737..1099838 + 33 28868225 - PSPTO_1006 - hypothetical protein 982 58.75 0 1099814..1100773 - 319 28868226 - PSPTO_1007 - GDP-6-deoxy-D-lyxo-4-hexulose reductase 983 59.67 0 1100918..1102318 + 466 28868227 - PSPTO_1008 - methyl-accepting chemotaxis protein 984 58.05 0 1102902..1103528 - 208 28868228 - PSPTO_1009 - isochorismatase family protein 985 62.28 0 1103683..1105254 - 523 28868229 phoD PSPTO_1010 - alkaline phosphatase D 986 60.11 0 1105251..1105814 - 187 28868230 - PSPTO_1011 - acetyltransferase 987 54.66 0 1106014..1106421 + 135 28868231 - PSPTO_1012 - TonB system transport protein 988 64.12 +1 1106421..1107206 + 261 28868232 - PSPTO_1013 - TonB domain-containing protein 989 57.56 0 1107227..1109509 + 760 28868233 - PSPTO_1014 - TonB-dependent receptor, putative 990 58.36 0 1109641..1110651 + 336 28868234 - PSPTO_1015 - integrase/recombinase XerC, putative 991 53.08 -1 1110675..1112279 + 534 28868235 - PSPTO_1016 - hypothetical protein 992 48.33 -2 1112173..1112532 + 119 28868236 - PSPTO_1017 - ISPsy5, Orf1 993 48.33 -2 1112778..1113137 + 119 28868237 - PSPTO_1019 - ISPsy5, Orf1 994 56.31 0 1113155..1114708 + 517 28868238 - PSPTO_1020 - ISPsy5, transposase 995 39.71 -2 1115514..1116344 - 276 28868239 hopAM1-1 PSPTO_1022 - type III effector HopAM1-1 996 62.66 0 1116554..1117102 + 182 28868240 - PSPTO_1023 - MotA/TolQ/ExbB proton channel family protein 997 60.28 0 1117166..1118434 + 422 28868241 - PSPTO_1024 - phospholipase D family protein 998 62.83 +1 1118505..1119704 + 399 28868242 - PSPTO_1025 - transglycosylase, putative 999 60.99 0 1119987..1121132 + 381 28868243 wssA PSPTO_1026 - cell morphology protein 1000 60.32 0 1121129..1123348 + 739 28868244 wssB PSPTO_1027 - cellulose synthase, catalytic subunit 1001 61.70 0 1123363..1125618 + 751 28868245 - PSPTO_1028 - cellulose synthase regulator protein 1002 65.02 +1 1125622..1126833 + 403 28868246 wssD PSPTO_1029 - endo-1,4-D-glucanase 1003 63.93 +1 1127013..1130705 + 1230 28868247 wssE PSPTO_1030 - cellulose synthase operon protein C 1004 60.51 0 1130721..1131386 + 221 28868248 wssF PSPTO_1031 - cell morphology protein 1005 62.52 0 1131383..1132057 + 224 28868249 wssG PSPTO_1032 - cell morphology protein 1006 62.01 0 1132076..1133491 + 471 28868250 wssH PSPTO_1033 - cellulose acetylase, subunit WssH 1007 63.80 +1 1133503..1134654 + 383 28868251 wssI PSPTO_1034 - cell morphology protein 1008 53.55 -1 1135027..1136406 - 459 28868252 - PSPTO_1035 - colicin/pyosin nuclease family protein 1009 47.62 -2 1136613..1137074 - 153 28868253 - PSPTO_1036 - hypothetical protein 1010 61.26 0 1137307..1137768 - 153 28868254 - PSPTO_1037 - hypothetical protein 1011 63.33 +1 1137765..1138214 - 149 28868255 - PSPTO_1038 - hypothetical protein 1012 60.30 0 1138505..1139509 + 334 28868256 - PSPTO_1039 - response regulator 1013 55.28 0 1139513..1139995 + 160 28868257 - PSPTO_1040 - sensory box protein 1014 63.64 +1 1140091..1141347 + 418 28868258 aroA PSPTO_1041 - 3-phosphoshikimate 1-carboxyvinyltransferase 1015 61.24 0 1141370..1142032 - 220 28868259 - PSPTO_1042 - transcriptional activator ChrR 1016 56.65 0 1142032..1142640 - 202 28868260 - PSPTO_1043 - RNA polymerase sigma factor RpoE 1017 55.56 0 1143054..1143233 - 59 28868261 - PSPTO_1044 - hypothetical protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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