version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 707 62.04 0 773250..773897 - 215 28867952 - PSPTO_0724 - DedA family protein 708 53.08 -1 774090..774560 - 156 28867953 - PSPTO_0725 - acetyltransferase 709 63.31 +1 774632..775495 - 287 28867954 eutC PSPTO_0726 - ethanolamine ammonia-lyase small subunit 710 61.72 0 775492..776886 - 464 28867955 eutB PSPTO_0727 - ethanolamine ammonia-lyase, heavy subunit 711 60.82 0 777182..778702 - 506 28867956 - PSPTO_0728 - aldehyde dehydrogenase family protein 712 60.96 0 778928..780277 + 449 28867957 mpl PSPTO_0729 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 713 61.90 0 780274..780903 + 209 28867958 - PSPTO_0730 - aromatic acid decarboxylase 714 64.98 +1 780884..781180 + 98 28867959 - PSPTO_0731 - putative lipoprotein 715 61.84 0 781219..781860 - 213 28867960 - PSPTO_0732 - hypothetical protein 716 61.05 0 781888..783615 - 575 28867961 - PSPTO_0733 - MORN repeat-containing protein 717 56.14 0 783756..784211 - 151 28867962 - PSPTO_0734 - MaoC-like domain-containing protein 718 59.50 0 784409..784771 + 120 28867963 - PSPTO_0735 - LrgA family protein 719 60.11 0 784768..785484 + 238 28867964 - PSPTO_0736 - hypothetical protein 720 57.87 0 785498..786088 + 196 28867965 - PSPTO_0737 - ATP-dependent protease La 721 63.30 +1 786218..786781 - 187 28867966 - PSPTO_0738 - putative lipoprotein 722 63.38 +1 786811..787449 - 212 28867967 - PSPTO_0739 - putative lipoprotein 723 62.46 0 787469..788134 - 221 28867968 smtA PSPTO_0740 - smtA protein 724 59.15 0 788215..788520 - 101 28867969 - PSPTO_0741 - hypothetical protein 725 61.89 0 788635..789492 - 285 28867970 - PSPTO_0742 - MaoC-like domain-containing protein 726 64.31 +1 789523..790878 - 451 28867971 - PSPTO_0743 - 3-ketoacyl-(acyl-carrier-protein) reductase 727 63.30 +1 790987..792264 + 425 28867972 - PSPTO_0744 - acetyl-CoA acetyltransferase 728 54.55 0 792445..792675 + 76 28867973 - PSPTO_0745 - hypothetical protein 729 62.30 0 792708..794105 + 465 28867974 - PSPTO_0746 - hypothetical protein 730 60.06 0 794113..795141 - 342 28867975 - PSPTO_0747 - transporter, putative 731 63.43 +1 795585..796481 + 298 28867976 - PSPTO_0748 - hypothetical protein 732 61.69 0 796601..797002 - 133 28867977 - PSPTO_0749 - transcriptional regulator, heavy metal-dependent 733 63.94 +1 796999..799197 - 732 28867978 - PSPTO_0750 - copper-translocating P-type ATPase 734 60.89 0 799267..799647 - 126 28867979 - PSPTO_0751 - hypothetical protein 735 56.06 0 799794..799991 + 65 28867980 - PSPTO_0752 - copZ protein, putative 736 62.49 0 800138..801334 + 398 28867981 - PSPTO_0753 - drug resistance transporter, Bcr/CflA family protein 737 60.76 0 801383..802432 - 349 28867982 - PSPTO_0754 - alcohol dehydrogenase, zinc-containing 738 62.34 0 802509..803432 + 307 28867983 - PSPTO_0755 - LysR family transcriptional regulator 739 64.79 +1 803869..804561 + 230 28867984 - PSPTO_0756 - transcriptional regulator, putative 740 60.06 0 804854..805807 - 317 28867985 add PSPTO_0757 - adenosine deaminase 741 61.70 0 805886..806851 - 321 28867986 - PSPTO_0758 - 2OG-Fe(II) oxygenase family oxidoreductase 742 60.18 0 806929..808023 - 364 28867987 - PSPTO_0759 - bmp family protein 743 64.65 +1 808253..809044 - 263 28867988 - PSPTO_0760 - iron-dicitrate transporter ATP-binding subunit 744 62.54 0 809048..810016 - 322 28867989 fecD PSPTO_0761 - iron(III) dicitrate transport system, permease protein FecD 745 65.23 +1 810013..810987 - 324 28867990 fecC PSPTO_0762 - iron-dicitrate transporter permease subunit 746 62.21 0 811003..811923 - 306 28867991 fecB PSPTO_0763 - iron-dicitrate transporter substrate-binding subunit 747 59.56 0 812170..813267 + 365 28867992 - PSPTO_0764 - calcium/proton antiporter, putative 748 62.09 0 813434..814789 - 451 28867993 atzB PSPTO_0765 - hydroxydechloroatrazine ethylaminohydrolase 749 59.64 0 814913..815638 - 241 28867994 - PSPTO_0766 - short chain dehydrogenase 750 63.54 +1 815889..816815 - 308 28867995 - PSPTO_0767 - ABC transporter, permease protein 751 62.03 0 816815..817915 - 366 28867996 - PSPTO_0768 - ABC transporter, permease protein, putative 752 62.93 +1 817927..819480 - 517 28867997 - PSPTO_0769 - ABC transporter, ATP-binding protein 753 60.77 0 820004..820597 - 197 28867998 - PSPTO_0770 - hypothetical protein 754 57.69 0 820630..821286 - 218 28867999 - PSPTO_0771 - TetR family transcriptional regulator 755 60.66 0 821385..822782 - 465 28868000 - PSPTO_0772 - xanthine/uracil permease family protein 756 59.39 0 822968..823888 - 306 28868001 - PSPTO_0773 - LysR family transcriptional regulator 757 57.54 0 824016..825362 + 448 28868002 - PSPTO_0774 - beta alanine--pyruvate transaminase 758 59.64 0 825456..826949 + 497 28868003 mmsA-1 PSPTO_0775 - methylmalonate-semialdehyde dehydrogenase 759 60.89 0 832977..836453 + 1158 28868004 recC PSPTO_0776 - exodeoxyribonuclease V, gamma subunit 760 62.58 0 836450..840142 + 1230 28868005 recB PSPTO_0777 - exodeoxyribonuclease V, beta subunit 761 63.80 +1 840139..842232 + 697 28868006 recD PSPTO_0778 - exodeoxyribonuclease V, alpha subunit 762 51.43 -1 842459..843613 - 384 28868007 - PSPTO_0779 - hypothetical protein 763 54.19 -1 843955..844932 + 325 28868008 - PSPTO_0780 - ISPssy, transposase 764 59.79 0 845447..846391 - 314 28868009 - PSPTO_0781 - LysR family transcriptional regulator 765 61.56 0 846549..848075 + 508 28868010 mmsA-2 PSPTO_0782 - methylmalonate-semialdehyde dehydrogenase 766 61.95 0 848110..849000 + 296 28868011 mmsB PSPTO_0783 - 3-hydroxyisobutyrate dehydrogenase 767 60.22 0 849115..851085 + 656 28868012 - PSPTO_0784 - TonB-dependent siderophore receptor, putative 768 63.55 +1 851370..852716 - 448 28868013 - PSPTO_0785 - sensor histidine kinase 769 64.58 +1 852746..853510 - 254 28868014 - PSPTO_0786 - DNA-binding response regulator 770 60.76 0 853803..855530 + 575 28868015 ggt PSPTO_0787 - gamma-glutamyltranspeptidase 771 65.23 +1 855610..856377 - 255 28868016 - PSPTO_0788 - phosphonate ABC transporter, permease protein, putative 772 65.70 +1 856374..857201 - 275 28868017 - PSPTO_0789 - phosphonate ABC transporter, permease protein, putative 773 65.79 +1 857195..857992 - 265 28868018 - PSPTO_0790 - phosphonate ABC transporter, ATP-binding protein, putative 774 61.50 0 857989..858840 - 283 28868019 - PSPTO_0791 - phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative 775 64.44 +1 858886..859020 + 44 28868020 - PSPTO_0792 - hypothetical protein 776 63.29 +1 859077..860111 + 344 28868021 selD PSPTO_0793 - selenophosphate synthetase 777 61.22 0 860111..861211 + 366 28868022 - PSPTO_0794 - tRNA 2-selenouridine synthase 778 63.92 +1 861246..862010 + 254 28868023 - PSPTO_0795 - hypothetical protein 779 61.92 0 862083..863051 - 322 28868024 ispB PSPTO_0796 - octylprenyl diphosphate synthase 780 51.28 -1 863291..863602 + 103 28868025 rplU PSPTO_0797 - 50S ribosomal protein L21 781 56.52 0 863635..863910 + 91 28868026 rpmA PSPTO_0798 - 50S ribosomal protein L27 782 59.15 0 864127..865350 + 407 28868027 - PSPTO_0799 - GTPase ObgE 783 63.99 +1 865441..866559 + 372 28868028 proB PSPTO_0800 - gamma-glutamyl kinase 784 60.08 0 866585..867055 + 156 28868029 creA PSPTO_0801 - creA protein 785 52.33 -1 867260..867538 - 92 28868030 rpsT PSPTO_0802 - 30S ribosomal protein S20 786 51.52 -1 867642..867740 + 32 28868031 - PSPTO_0803 - hypothetical protein 787 59.19 0 867789..869327 + 512 28868032 - PSPTO_0804 - MviN family membrane protein 788 62.03 0 869460..870386 + 308 28868033 ribF PSPTO_0805 - bifunctional riboflavin kinase/FMN adenylyltransferase 789 60.38 0 870407..873238 + 943 28868034 ileS PSPTO_0806 - isoleucyl-tRNA synthetase 790 58.43 0 873231..873752 + 173 28868035 lspA PSPTO_0807 - lipoprotein signal peptidase 791 56.18 0 873745..874221 + 158 28868036 - PSPTO_0808 - peptidyl-prolyl cis-trans isomerase, FKBP-type 792 61.92 0 874305..875252 + 315 28868037 ispH PSPTO_0809 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 793 57.29 0 875259..875759 - 166 28868038 - PSPTO_0810 - type IV pilus biogenesis protein 794 57.17 0 875891..876364 + 157 28868039 - PSPTO_0811 - pillin, putative 795 60.47 0 876364..876879 + 171 28868040 - PSPTO_0812 - hypothetical protein 796 53.81 -1 876876..877583 + 235 28868041 - PSPTO_0813 - hypothetical protein 797 54.04 -1 877595..878101 + 168 28868042 - PSPTO_0814 - hypothetical protein 798 55.15 0 878088..881291 + 1067 28868043 - PSPTO_0815 - type IV pilus-associated protein, putative 799 56.22 0 881303..881704 + 133 28868044 - PSPTO_0816 - type IV pilus biogenesis protein 800 62.59 0 881733..882836 + 367 28868045 - PSPTO_0817 - oxidoreductase, FAD-binding 801 59.01 0 882967..883410 + 147 28868046 - PSPTO_0818 - MarR family transcriptional regulator 802 58.23 0 883449..884195 + 248 28868047 - PSPTO_0819 - hypothetical protein 803 61.56 0 884192..887302 - 1036 28868048 - PSPTO_0820 - AcrB/AcrD/AcrF family protein 804 64.52 +1 887299..888414 - 371 28868049 - PSPTO_0821 - RND family efflux transporter MFP subunit 805 55.99 0 888496..889113 - 205 28868050 - PSPTO_0822 - TetR family transcriptional regulator 806 60.25 0 889587..890927 - 446 28868051 pilR PSPTO_0823 - type 4 fimbriae expression regulatory protein pilR 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0