version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 658 59.34 0 730513..731331 - 272 28867903 - PSPTO_0675 - arylesterase 659 60.94 0 731587..733890 + 767 28867904 - PSPTO_0676 - mechanosensitive ion channel family protein 660 63.14 +1 734058..734936 + 292 28867905 - PSPTO_0677 - lipopolysaccharide biosynthesis protein, putative 661 60.43 0 734929..735858 + 309 28867906 - PSPTO_0678 - NAD-dependent epimerase/dehydratase family protein 662 59.68 0 736029..736715 - 228 28867907 - PSPTO_0679 - outer membrane protein OmpW 663 59.05 0 736819..737343 - 174 28867908 - PSPTO_0680 - putative lipoprotein 664 60.66 0 737352..738617 - 421 28867909 - PSPTO_0681 - permease, putative 665 62.45 0 738619..739329 - 236 28867910 - PSPTO_0682 - ABC transporter, ATP-binding protein 666 57.99 0 739399..739986 - 195 28867911 - PSPTO_0683 - hypothetical protein 667 56.16 0 740161..740712 + 183 28867912 - PSPTO_0684 - hypothetical protein 668 63.59 +1 740788..741144 + 118 28867913 - PSPTO_0685 - hypothetical protein 669 59.34 0 741199..742071 - 290 28867914 trx-1 PSPTO_0686 - thioredoxin 670 64.07 +1 742244..742897 - 217 28867915 - PSPTO_0687 - hypothetical protein 671 63.11 +1 742894..743343 - 149 28867916 - PSPTO_0688 - putative lipoprotein 672 62.37 0 743520..743984 + 154 28867917 - PSPTO_0689 - transcriptional regulator NrdR 673 65.45 +1 743981..745126 + 381 28867918 ribD PSPTO_0690 - riboflavin biosynthesis protein RibD 674 61.24 0 745174..745836 + 220 28867919 ribE PSPTO_0691 - riboflavin synthase subunit alpha 675 60.90 0 745854..746945 + 363 28867920 ribBA-1 PSPTO_0692 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 676 59.96 0 747074..747550 + 158 28867921 ribH-1 PSPTO_0693 - riboflavin synthase subunit beta 677 57.63 0 747547..748044 + 165 28867922 nusB PSPTO_0694 - transcription antitermination protein NusB 678 64.08 +1 748061..749026 + 321 28867923 thiL PSPTO_0695 - thiamine monophosphate kinase 679 60.06 0 749113..749778 + 221 28867924 ribA PSPTO_0696 - GTP cyclohydrolase II 680 61.15 0 749775..750191 + 138 28867925 - PSPTO_0697 - hypothetical protein 681 61.66 0 750560..752455 - 631 28867926 dxs PSPTO_0698 - 1-deoxy-D-xylulose-5-phosphate synthase 682 64.41 +1 752619..753506 - 295 28867927 ispA PSPTO_0699 - geranyltranstransferase 683 58.94 0 753503..753748 - 81 28867928 xseB PSPTO_0700 - exodeoxyribonuclease VII small subunit 684 60.75 0 753852..755018 - 388 28867929 metC-1 PSPTO_0701 - cystathionine beta-lyase 685 56.67 0 755088..756107 - 339 28867930 - PSPTO_0702 - hypothetical protein 686 58.80 0 756309..757223 - 304 28867931 - PSPTO_0703 - putative glutathione S-transferase YghU 687 52.38 -1 757479..758255 + 258 28867932 - PSPTO_0704 - O-antigen ABC transporter, permease protein, putative 688 51.77 -1 758252..758956 + 234 28867933 - PSPTO_0705 - O-antigen ABC transporter, ATP-binding protein 689 54.72 0 759038..759799 + 253 28867934 - PSPTO_0706 - lipopolysaccharide biosynthesis protein, putative 690 55.93 0 759801..760415 + 204 28867935 - PSPTO_0707 - hypothetical protein 691 53.52 -1 760423..761061 + 212 28867936 - PSPTO_0708 - HAD-superfamily hydrolase 692 54.77 0 761067..761789 + 240 28867937 - PSPTO_0709 - hypothetical protein 693 55.89 0 761810..762106 + 98 28867938 - PSPTO_0710 - hypothetical protein 694 54.45 -1 762110..763885 + 591 28867939 - PSPTO_0711 - hypothetical protein 695 52.31 -1 763882..764487 + 201 28867940 - PSPTO_0712 - hypothetical protein 696 55.27 0 764541..765584 + 347 28867941 - PSPTO_0713 - hypothetical protein 697 55.80 0 765763..768054 + 763 28867942 - PSPTO_0714 - autotransporter, putative 698 58.40 0 768108..768905 + 265 28867943 - PSPTO_0715 - hypothetical protein 699 50.18 -2 768928..769200 - 90 28867944 - PSPTO_0716 - DNA-binding protein 700 53.91 -1 769224..769466 - 80 28867945 - PSPTO_0717 - DNA-binding protein 701 55.64 0 769587..769985 + 132 28867946 - PSPTO_0718 - hypothetical protein 702 48.59 -2 769966..770142 + 58 28867947 - PSPTO_0719 - hypothetical protein 703 56.30 0 770144..770413 + 89 28867948 - PSPTO_0720 - hypothetical protein 704 58.20 0 770709..771440 - 243 28867949 - PSPTO_0721 - transcriptional regulator, putative 705 57.58 0 771799..772326 - 175 28867950 ppa-1 PSPTO_0722 - inorganic pyrophosphatase 706 62.35 0 772437..773246 - 269 28867951 - PSPTO_0723 - hypothetical protein 707 62.04 0 773250..773897 - 215 28867952 - PSPTO_0724 - DedA family protein 708 53.08 -1 774090..774560 - 156 28867953 - PSPTO_0725 - acetyltransferase 709 63.31 +1 774632..775495 - 287 28867954 eutC PSPTO_0726 - ethanolamine ammonia-lyase small subunit 710 61.72 0 775492..776886 - 464 28867955 eutB PSPTO_0727 - ethanolamine ammonia-lyase, heavy subunit 711 60.82 0 777182..778702 - 506 28867956 - PSPTO_0728 - aldehyde dehydrogenase family protein 712 60.96 0 778928..780277 + 449 28867957 mpl PSPTO_0729 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 713 61.90 0 780274..780903 + 209 28867958 - PSPTO_0730 - aromatic acid decarboxylase 714 64.98 +1 780884..781180 + 98 28867959 - PSPTO_0731 - putative lipoprotein 715 61.84 0 781219..781860 - 213 28867960 - PSPTO_0732 - hypothetical protein 716 61.05 0 781888..783615 - 575 28867961 - PSPTO_0733 - MORN repeat-containing protein 717 56.14 0 783756..784211 - 151 28867962 - PSPTO_0734 - MaoC-like domain-containing protein 718 59.50 0 784409..784771 + 120 28867963 - PSPTO_0735 - LrgA family protein 719 60.11 0 784768..785484 + 238 28867964 - PSPTO_0736 - hypothetical protein 720 57.87 0 785498..786088 + 196 28867965 - PSPTO_0737 - ATP-dependent protease La 721 63.30 +1 786218..786781 - 187 28867966 - PSPTO_0738 - putative lipoprotein 722 63.38 +1 786811..787449 - 212 28867967 - PSPTO_0739 - putative lipoprotein 723 62.46 0 787469..788134 - 221 28867968 smtA PSPTO_0740 - smtA protein 724 59.15 0 788215..788520 - 101 28867969 - PSPTO_0741 - hypothetical protein 725 61.89 0 788635..789492 - 285 28867970 - PSPTO_0742 - MaoC-like domain-containing protein 726 64.31 +1 789523..790878 - 451 28867971 - PSPTO_0743 - 3-ketoacyl-(acyl-carrier-protein) reductase 727 63.30 +1 790987..792264 + 425 28867972 - PSPTO_0744 - acetyl-CoA acetyltransferase 728 54.55 0 792445..792675 + 76 28867973 - PSPTO_0745 - hypothetical protein 729 62.30 0 792708..794105 + 465 28867974 - PSPTO_0746 - hypothetical protein 730 60.06 0 794113..795141 - 342 28867975 - PSPTO_0747 - transporter, putative 731 63.43 +1 795585..796481 + 298 28867976 - PSPTO_0748 - hypothetical protein 732 61.69 0 796601..797002 - 133 28867977 - PSPTO_0749 - transcriptional regulator, heavy metal-dependent 733 63.94 +1 796999..799197 - 732 28867978 - PSPTO_0750 - copper-translocating P-type ATPase 734 60.89 0 799267..799647 - 126 28867979 - PSPTO_0751 - hypothetical protein 735 56.06 0 799794..799991 + 65 28867980 - PSPTO_0752 - copZ protein, putative 736 62.49 0 800138..801334 + 398 28867981 - PSPTO_0753 - drug resistance transporter, Bcr/CflA family protein 737 60.76 0 801383..802432 - 349 28867982 - PSPTO_0754 - alcohol dehydrogenase, zinc-containing 738 62.34 0 802509..803432 + 307 28867983 - PSPTO_0755 - LysR family transcriptional regulator 739 64.79 +1 803869..804561 + 230 28867984 - PSPTO_0756 - transcriptional regulator, putative 740 60.06 0 804854..805807 - 317 28867985 add PSPTO_0757 - adenosine deaminase 741 61.70 0 805886..806851 - 321 28867986 - PSPTO_0758 - 2OG-Fe(II) oxygenase family oxidoreductase 742 60.18 0 806929..808023 - 364 28867987 - PSPTO_0759 - bmp family protein 743 64.65 +1 808253..809044 - 263 28867988 - PSPTO_0760 - iron-dicitrate transporter ATP-binding subunit 744 62.54 0 809048..810016 - 322 28867989 fecD PSPTO_0761 - iron(III) dicitrate transport system, permease protein FecD 745 65.23 +1 810013..810987 - 324 28867990 fecC PSPTO_0762 - iron-dicitrate transporter permease subunit 746 62.21 0 811003..811923 - 306 28867991 fecB PSPTO_0763 - iron-dicitrate transporter substrate-binding subunit 747 59.56 0 812170..813267 + 365 28867992 - PSPTO_0764 - calcium/proton antiporter, putative 748 62.09 0 813434..814789 - 451 28867993 atzB PSPTO_0765 - hydroxydechloroatrazine ethylaminohydrolase 749 59.64 0 814913..815638 - 241 28867994 - PSPTO_0766 - short chain dehydrogenase 750 63.54 +1 815889..816815 - 308 28867995 - PSPTO_0767 - ABC transporter, permease protein 751 62.03 0 816815..817915 - 366 28867996 - PSPTO_0768 - ABC transporter, permease protein, putative 752 62.93 +1 817927..819480 - 517 28867997 - PSPTO_0769 - ABC transporter, ATP-binding protein 753 60.77 0 820004..820597 - 197 28867998 - PSPTO_0770 - hypothetical protein 754 57.69 0 820630..821286 - 218 28867999 - PSPTO_0771 - TetR family transcriptional regulator 755 60.66 0 821385..822782 - 465 28868000 - PSPTO_0772 - xanthine/uracil permease family protein 756 59.39 0 822968..823888 - 306 28868001 - PSPTO_0773 - LysR family transcriptional regulator 757 57.54 0 824016..825362 + 448 28868002 - PSPTO_0774 - beta alanine--pyruvate transaminase 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0