version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4172 55.95 0 4817118..4818041 - 307 28871413 - PSPTO_4276 - LysR family transcriptional regulator 4173 57.19 0 4818257..4819090 + 277 28871414 - PSPTO_4277 - esterase/lipase/thioesterase family protein 4174 54.22 -1 4819268..4820440 + 390 28871415 - PSPTO_4278 - major facilitator family transporter 4175 56.80 0 4820633..4820926 + 97 28871416 - PSPTO_4279 - hypothetical protein 4176 59.84 0 4820934..4821812 + 292 28871417 - PSPTO_4280 - nickel/cobalt efflux protein RcnA 4177 58.05 0 4821822..4822262 + 146 28871418 - PSPTO_4281 - hypothetical protein 4178 53.90 -1 4822314..4822454 + 46 28871419 - PSPTO_4282 - hypothetical protein 4179 59.44 0 4822443..4823687 - 414 28871420 pnlA PSPTO_4283 - pectin lyase 4180 59.73 0 4823844..4824290 - 148 28871421 - PSPTO_4284 - acetyltransferase 4181 59.79 0 4824315..4825463 - 382 28871422 adhB PSPTO_4285 - alcohol dehydrogenase II 4182 57.00 0 4825598..4826818 - 406 28871423 - PSPTO_4286 - hypothetical protein 4183 49.92 -2 4827116..4828339 + 407 158146059 - PSPTO_5625 - binary cytotoxin component, putative 4184 51.93 -1 4828342..4829352 + 336 28871424 - PSPTO_4287 - binary cytotoxin component, putative 4185 58.90 0 4829410..4830027 - 205 28871425 - PSPTO_4288 - hypothetical protein 4186 62.14 0 4830062..4830679 - 205 28871426 - PSPTO_4289 - hypothetical protein 4187 58.92 0 4831075..4833372 + 765 28871427 bglX PSPTO_4290 - beta-glucosidase 4188 62.23 0 4833443..4835200 + 585 28871428 - PSPTO_4291 - sensor histidine kinase 4189 62.70 0 4835207..4836541 + 444 28871429 - PSPTO_4292 - sigma-54 dependent transcriptional regulator/response regulator 4190 60.16 0 4836767..4839148 + 793 28871430 - PSPTO_4293 - sensory box histidine kinase/response regulator 4191 59.65 0 4839316..4841010 + 564 28871431 hscC PSPTO_4294 - chaperone protein HscC 4192 55.70 0 4841016..4842656 + 546 28871432 - PSPTO_4295 - DnaJ domain-containing protein 4193 58.97 0 4842839..4844164 + 441 28871433 - PSPTO_4296 - metabolite-proton symporter, putative 4194 59.78 0 4844667..4845029 + 120 28871434 - PSPTO_4297 - hypothetical protein 4195 59.78 0 4845168..4845791 + 207 28871435 - PSPTO_4298 - hypothetical protein 4196 62.92 +1 4845792..4846031 - 79 28871436 - PSPTO_4299 - hypothetical protein 4197 61.52 0 4846462..4847976 + 504 28871437 - PSPTO_4300 - EmrB/QacA family drug resistance transporter 4198 58.02 0 4847990..4849123 - 377 28871438 - PSPTO_4301 - hypothetical protein 4199 56.55 0 4849586..4850257 - 223 28871439 - PSPTO_4302 - TetR family transcriptional regulator 4200 60.12 0 4850512..4851672 + 386 28871440 - PSPTO_4303 - RND family efflux transporter MFP subunit 4201 59.30 0 4851676..4854810 + 1044 28871441 - PSPTO_4304 - AcrB/AcrD/AcrF family protein 4202 62.22 0 4854807..4856267 + 486 28871442 - PSPTO_4305 - outer membrane efflux protein 4203 58.68 0 4856343..4857644 - 433 28871443 pcaT PSPTO_4306 - dicarboxylic acid transport protein 4204 65.08 +1 4857791..4858990 - 399 28871444 catF PSPTO_4307 - beta-ketoadipyl CoA thiolase 4205 62.31 0 4858990..4859769 - 259 28871445 catJ PSPTO_4308 - 3-oxoadipate:succinyl-CoA transferase, subunit B 4206 59.32 0 4859769..4860626 - 285 28871446 catI PSPTO_4309 - 3-oxoadipate:succinyl-CoA transferase, subunit A 4207 59.19 0 4860784..4861626 - 280 28871447 pcaR PSPTO_4310 - Pca regulon regulatory protein PcaR 4208 53.33 -1 4862471..4862695 - 74 28871448 - PSPTO_4311 - hypothetical protein 4209 59.67 0 4862886..4864358 + 490 28871449 - PSPTO_4312 - phosphate transporter family protein 4210 60.48 0 4864414..4864623 - 69 28871450 - PSPTO_4313 - hypothetical protein 4211 57.98 0 4864702..4865553 - 283 28871451 purU-3 PSPTO_4314 - formyltetrahydrofolate deformylase 4212 53.28 -1 4865912..4866292 + 126 28871452 - PSPTO_4315 - transcriptional regulator, putative 4213 56.46 0 4866365..4867795 - 476 28871453 sbcB PSPTO_4316 - exonuclease I 4214 61.86 0 4868002..4868709 + 235 28871454 - PSPTO_4317 - hypothetical protein 4215 61.57 0 4868706..4869686 + 326 28871455 - PSPTO_4318 - integral membrane protein 4216 60.51 0 4869673..4871265 + 530 28871456 - PSPTO_4319 - hypothetical protein 4217 61.51 0 4871262..4872482 + 406 28871457 - PSPTO_4320 - hypothetical protein 4218 54.98 0 4872780..4873772 + 330 28871458 - PSPTO_4321 - hypothetical protein 4219 52.61 -1 4873769..4875589 + 606 28871459 - PSPTO_4322 - hypothetical protein 4220 53.12 -1 4875594..4876073 + 159 28871460 - PSPTO_4323 - hypothetical protein 4221 53.87 -1 4876653..4876949 + 98 28871461 - PSPTO_4324 - hypothetical protein 4222 54.47 0 4876949..4878457 + 502 28871462 - PSPTO_4325 - hypothetical protein 4223 52.23 -1 4878641..4879582 + 313 28871463 - PSPTO_4326 - hypothetical protein 4224 51.21 -1 4879585..4879914 + 109 28871464 - PSPTO_4327 - hypothetical protein 4225 58.22 0 4879876..4880313 - 145 28871465 - PSPTO_4328 - ISPs1, transposase OrfB 4226 56.91 0 4880361..4880729 - 122 28871466 - PSPTO_4329 - ISPs1, transposase OrfA 4227 53.75 -1 4880833..4881072 + 79 28871467 - PSPTO_4330 - hypothetical protein 4228 50.63 -1 4881167..4881802 + 211 28871468 hopE1 PSPTO_4331 - type III effector HopE1 4229 53.97 -1 4882082..4883365 + 427 28871469 - PSPTO_4332 - hypothetical protein 4230 63.14 +1 4883603..4884652 + 349 28871470 - PSPTO_4333 - moxR protein, putative 4231 60.64 0 4884649..4885992 + 447 28871471 - PSPTO_4334 - hypothetical protein 4232 53.33 -1 4886033..4886392 - 119 28871472 - PSPTO_4335 - hypothetical protein 4233 58.72 0 4886581..4887033 - 150 28871473 - PSPTO_4336 - putative lipoprotein 4234 61.50 0 4887159..4888610 + 483 28871474 pyk PSPTO_4337 - pyruvate kinase 4235 63.68 +1 4888692..4889630 - 312 28871475 - PSPTO_4338 - hypothetical protein 4236 61.88 0 4889810..4891333 + 507 28871476 - PSPTO_4339 - fumarate hydratase, class I, putative 4237 55.19 0 4891381..4894203 - 940 28871477 - PSPTO_4340 - insecticidal toxin protein, putative 4238 55.90 0 4897445..4902292 + 1615 28871478 - PSPTO_4342 - insecticidal toxin protein, putative 4239 59.82 0 4902312..4906652 + 1446 28871479 - PSPTO_4343 - insecticidal toxin protein, putative 4240 54.83 0 4906645..4909305 + 886 28871480 - PSPTO_4344 - insecticidal toxin protein, putative 4241 53.24 -1 4909571..4909786 + 71 28871481 - PSPTO_4345 - hypothetical protein 4242 48.41 -2 4910339..4910683 + 114 28871482 - PSPTO_4346 - hypothetical protein 4243 54.19 -1 4910862..4911839 + 325 28871483 - PSPTO_4347 - ISPssy, transposase 4244 48.97 -2 4912008..4912493 - 161 28871484 - PSPTO_4348 - hypothetical protein 4245 62.18 0 4912598..4913755 - 385 28871485 - PSPTO_4349 - phospholipase D family protein 4246 61.68 0 4913757..4914338 - 193 28871486 - PSPTO_4350 - YceI-like family protein 4247 61.06 0 4914419..4914757 - 112 28871487 - PSPTO_4351 - hypothetical protein 4248 60.89 0 4914754..4915860 - 368 28871488 - PSPTO_4352 - hydrolase, putative 4249 61.11 0 4916238..4916993 + 251 28871489 - PSPTO_4353 - hypothetical protein 4250 63.57 +1 4916993..4917799 + 268 28871490 - PSPTO_4354 - acyltransferase domain-containing protein 4251 61.50 0 4917757..4918356 - 199 28871491 - PSPTO_4355 - hypothetical protein 4252 59.68 0 4918521..4918835 + 104 28871492 - PSPTO_4356 - ArsR family transcriptional regulator 4253 63.84 +1 4918868..4920034 + 388 28871493 - PSPTO_4357 - major facilitator family transporter 4254 60.48 0 4920056..4921105 + 349 28871494 - PSPTO_4358 - oxidoreductase, FAD/FMN-binding 4255 59.20 0 4921196..4922065 - 289 28871495 - PSPTO_4359 - hypothetical protein 4256 58.74 0 4922149..4923069 - 306 28871496 - PSPTO_4360 - dehydrogenase, putative 4257 65.00 +1 4923213..4924112 - 299 28871497 iciA PSPTO_4361 - chromosome replication initiation inhibitor protein 4258 63.52 +1 4924208..4924810 + 200 28871498 - PSPTO_4362 - amino acid transporter LysE 4259 59.11 0 4925003..4925584 + 193 28871499 sodB PSPTO_4363 - superoxide dismutase, Fe 4260 56.57 0 4925639..4925737 - 32 28871500 - PSPTO_4364 - hypothetical protein 4261 59.60 0 4925971..4928022 + 683 28871501 - PSPTO_4365 - GGDEF domain/EAL domain-containing protein 4262 62.62 0 4928198..4929556 + 452 28871502 - PSPTO_4366 - iron-regulated protein A, putative 4263 62.54 0 4929853..4931280 + 475 28871503 - PSPTO_4367 - putative lipoprotein 4264 59.34 0 4931341..4932405 + 354 28871504 - PSPTO_4368 - putative lipoprotein 4265 60.02 0 4932422..4933519 + 365 28871505 - PSPTO_4369 - putative lipoprotein 4266 59.21 0 4933544..4933771 - 75 28871506 - PSPTO_4370 - hypothetical protein 4267 59.75 0 4933768..4934490 - 240 28871507 inaA PSPTO_4371 - inaA protein 4268 54.48 0 4934495..4935175 - 226 28871508 - PSPTO_4372 - hypothetical protein 4269 59.84 0 4935376..4936665 - 429 28871509 colS PSPTO_4373 - sensor histidine kinase ColS 4270 61.99 0 4936655..4937338 - 227 28871510 colR PSPTO_4374 - DNA-binding response regulator ColR 4271 57.80 0 4937515..4938258 + 247 28871511 - PSPTO_4375 - PAP2 superfamily protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0