version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3774 62.95 +1 4375583..4376686 - 367 28871015 - PSPTO_3862 - hypothetical protein 3775 51.75 -1 4376977..4377720 + 247 28871016 psyR PSPTO_3863 - transcriptional regulator PsyR 3776 55.37 0 4377652..4378386 - 244 28871017 psyI PSPTO_3864 - autoinducer synthesis protein PsyI 3777 56.14 0 4378606..4379802 + 398 28871018 - PSPTO_3865 - hypothetical protein 3778 57.30 0 4379795..4380328 + 177 28871019 - PSPTO_3866 - hypothetical protein 3779 59.40 0 4380318..4381115 + 265 28871020 - PSPTO_3867 - dihydrodipicolinate synthetase family protein 3780 57.93 0 4381115..4381972 + 285 28871021 - PSPTO_3868 - hypothetical protein 3781 61.60 0 4381956..4382192 + 78 28871022 - PSPTO_3869 - hypothetical protein 3782 61.34 0 4382255..4383436 - 393 28871023 - PSPTO_3870 - patatin family protein 3783 58.95 0 4383469..4384401 - 310 28871024 htrB PSPTO_3871 - lipid A biosynthesis lauroyl acyltransferase 3784 60.73 0 4384522..4385262 + 246 28871025 minC PSPTO_3872 - septum formation inhibitor 3785 58.79 0 4385492..4386304 + 270 28871026 minD PSPTO_3873 - septum site-determining protein MinD 3786 50.98 -1 4386304..4386558 + 84 28871027 minE PSPTO_3874 - cell division topological specificity factor MinE 3787 59.91 0 4386649..4387284 + 211 162533083 rluA PSPTO_3875 - ribosomal large subunit pseudouridine synthase A 3788 60.62 0 4387656..4388945 + 429 28871028 - PSPTO_3876 - putative aminopeptidase 2 3789 59.86 0 4389003..4389722 - 239 28871029 - PSPTO_3877 - GntR family transcriptional regulator 3790 56.84 0 4390080..4391147 + 355 28871030 - PSPTO_3878 - ABC transporter, periplasmic substrate-binding protein 3791 61.92 0 4391168..4392031 + 287 28871031 - PSPTO_3879 - hypothetical protein 3792 58.72 0 4392028..4392870 + 280 28871032 - PSPTO_3880 - polyamine ABC transporter, permease protein, putative 3793 59.40 0 4392857..4393654 + 265 28871033 - PSPTO_3881 - polyamine ABC transporter, permease protein, putative 3794 61.11 0 4393656..4394645 + 329 28871034 - PSPTO_3882 - polyamine ABC transporter, ATP-binding protein, putative 3795 59.11 0 4394799..4395380 + 193 28871035 - PSPTO_3883 - HAD-superfamily hydrolase 3796 62.10 0 4395399..4396361 - 320 28871036 - PSPTO_3884 - oxidoreductase, zinc-binding 3797 58.36 0 4396500..4398581 + 693 28871037 prc PSPTO_3885 - tail-specific protease 3798 60.01 0 4398715..4400487 + 590 28871038 - PSPTO_3886 - EAL/GGDEF domain-containing protein 3799 66.39 +1 4400679..4401044 - 121 28871039 - PSPTO_3887 - hypothetical protein 3800 63.45 +1 4401047..4401388 - 113 28871040 - PSPTO_3888 - hypothetical protein 3801 59.95 0 4401489..4401890 - 133 28871041 - PSPTO_3889 - hypothetical protein 3802 56.20 0 4402330..4403103 - 257 28871042 - PSPTO_3890 - peptidyl-prolyl cis-trans isomerase, FKBP-type 3803 59.39 0 4403310..4404725 - 471 28871043 - PSPTO_3891 - hypothetical protein 3804 59.87 0 4404888..4405505 + 205 28871044 - PSPTO_3892 - hypothetical protein 3805 57.69 0 4405578..4405967 - 129 28871045 - PSPTO_3893 - glyoxalase, putative 3806 61.88 0 4406024..4407214 - 396 28871046 - PSPTO_3894 - CAIB/BAIF family protein 3807 51.77 -1 4407337..4407732 - 131 28871047 - PSPTO_3895 - hypothetical protein 3808 50.79 -1 4407959..4408084 + 41 28871048 - PSPTO_3896 - hypothetical protein 3809 60.59 0 4408438..4409358 + 306 28871049 - PSPTO_3897 - recombination associated protein 3810 60.34 0 4409447..4410394 + 315 28871050 - PSPTO_3898 - sodium/bile acid symporter family protein 3811 58.03 0 4410922..4412796 - 624 28871051 - PSPTO_3899 - acyltransferase family protein 3812 61.37 0 4413040..4416513 + 1157 28871052 - PSPTO_3900 - sensory box histidine kinase/response regulator 3813 56.98 0 4416569..4417507 - 312 28871053 - PSPTO_3901 - hypothetical protein 3814 59.28 0 4417685..4418659 - 324 28871054 cysK PSPTO_3902 - cysteine synthase A 3815 57.61 0 4418787..4419857 + 356 28871055 - PSPTO_3903 - hypothetical protein 3816 50.98 -1 4419919..4420071 - 50 28871056 - PSPTO_3904 - hypothetical protein 3817 58.27 0 4420195..4421040 + 281 28871057 - PSPTO_3905 - AAA family ATPase 3818 57.59 0 4421080..4422258 + 392 28871058 - PSPTO_3906 - hypothetical protein 3819 53.78 -1 4422424..4423176 + 250 28871059 - PSPTO_3907 - hypothetical protein 3820 56.57 0 4423209..4423733 - 174 28871060 - PSPTO_3908 - hypothetical protein 3821 59.44 0 4423780..4424568 - 262 28871061 - PSPTO_3909 - hypothetical protein 3822 61.22 0 4424645..4425121 - 158 28871062 - PSPTO_3910 - hypothetical protein 3823 61.52 0 4425254..4427311 + 685 28871063 - PSPTO_3911 - protease II 3824 60.00 0 4427438..4427872 + 144 28871064 - PSPTO_3912 - cyclic nucleotide-binding protein 3825 60.80 0 4427938..4428312 + 124 28871065 - PSPTO_3913 - hypothetical protein 3826 60.68 0 4428608..4430377 + 589 28871066 copA PSPTO_3914 - copper resistance protein A 3827 62.55 0 4430482..4431258 + 258 28871067 - PSPTO_3915 - copper resistance protein B 3828 60.44 0 4431331..4431828 + 165 28871068 - PSPTO_3916 - hypothetical protein 3829 60.37 0 4431937..4432317 + 126 28871069 - PSPTO_3917 - hypothetical protein 3830 57.11 0 4432322..4432771 - 149 28871070 - PSPTO_3918 - hypothetical protein 3831 62.12 0 4432983..4433576 + 197 28871071 - PSPTO_3919 - nitroreductase family protein 3832 60.45 0 4433652..4434584 - 310 28871072 - PSPTO_3920 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 3833 56.12 0 4434655..4434948 - 97 28871073 - PSPTO_3921 - hypothetical protein 3834 61.55 0 4434945..4436078 - 377 28871074 rnd PSPTO_3922 - ribonuclease D 3835 52.98 -1 4436285..4437928 - 547 28871075 - PSPTO_3923 - hypothetical protein 3836 59.47 0 4438161..4439882 - 573 28871076 sfcA PSPTO_3924 - malate dehydrogenase 3837 56.52 0 4440165..4440647 - 160 28871077 - PSPTO_3925 - gas vesicle protein, putative 3838 54.05 -1 4441402..4442067 - 221 28871078 - PSPTO_3927 - hypothetical protein 3839 43.84 -2 4442900..4443118 - 72 28871079 - PSPTO_3929 - cold shock domain-contain protein 3840 42.81 -2 4443121..4444302 - 393 28871080 - PSPTO_3930 - retron reverse transcriptase 3841 59.72 0 4445395..4445538 + 47 28871081 - PSPTO_3931 - hypothetical protein 3842 60.12 0 4445527..4446045 - 172 28871082 - PSPTO_3932 - hypothetical protein 3843 62.36 0 4446042..4446575 - 177 28871083 - PSPTO_3933 - lysozyme, putative 3844 54.48 0 4446636..4446914 - 92 28871084 - PSPTO_3934 - tail fiber assembly domain-containing protein 3845 49.30 -2 4446907..4447263 - 118 28871085 - PSPTO_3935 - hypothetical protein 3846 55.46 0 4447263..4448261 - 332 28871086 - PSPTO_3936 - tail fiber domain-containing protein 3847 50.83 -1 4448289..4448951 - 220 28871087 - PSPTO_3937 - hypothetical protein 3848 49.32 -2 4448948..4449316 - 122 28871088 - PSPTO_3938 - hypothetical protein 3849 59.37 0 4453493..4454095 + 200 28871089 - PSPTO_3942 - hypothetical protein 3850 59.49 0 4454139..4454333 + 64 28871090 - PSPTO_3943 - carbon storage regulator, putative 3851 58.70 0 4454323..4455000 + 225 28871091 - PSPTO_3944 - hypothetical protein 3852 60.70 0 4454997..4455197 + 66 28871092 - PSPTO_3945 - hypothetical protein 3853 56.41 0 4455286..4455753 + 155 28871093 - PSPTO_3946 - hypothetical protein 3854 55.43 0 4455743..4456000 + 85 28871094 - PSPTO_3947 - hypothetical protein 3855 61.72 0 4455993..4456376 + 127 28871095 - PSPTO_3948 - hypothetical protein 3856 55.75 0 4457531..4458574 - 347 28871096 - PSPTO_3949 - phage integrase family site specific recombinase 3857 55.98 0 4458800..4459510 - 236 28871097 purC PSPTO_3950 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3858 60.74 0 4459539..4460297 - 252 28871098 - PSPTO_3951 - metallo-beta-lactamase superfamily protein 3859 60.77 0 4460298..4461416 - 372 28871099 - PSPTO_3952 - putative lipoprotein 3860 59.50 0 4461435..4462313 - 292 28871100 dapA PSPTO_3953 - dihydrodipicolinate synthase 3861 60.11 0 4462639..4463202 + 187 28871101 - PSPTO_3954 - hypothetical protein 3862 55.70 0 4463212..4463685 + 157 28871102 - PSPTO_3955 - AhpC/Tsa family protein 3863 60.88 0 4463752..4464822 - 356 28871103 - PSPTO_3956 - PerM family membrane protein 3864 61.51 0 4464855..4465106 - 83 28871104 - PSPTO_3957 - hypothetical protein 3865 60.04 0 4465247..4466680 + 477 28871105 - PSPTO_3958 - hypothetical protein 3866 60.06 0 4466782..4467840 - 352 28871106 nadA PSPTO_3959 - quinolinate synthetase 3867 59.29 0 4468247..4469845 + 532 28871107 pglA PSPTO_3960 - polygalacturonase 3868 40.80 -2 4470140..4470340 + 66 28871108 - PSPTO_3961 - hypothetical protein 3869 42.86 -2 4470547..4470651 + 34 28871109 - PSPTO_3962 - hypothetical protein 3870 54.19 -1 4470781..4471758 - 325 28871110 - PSPTO_3963 - ISPssy, transposase 3871 51.16 -1 4472738..4474291 + 517 28871111 - PSPTO_3965 - hypothetical protein 3872 52.22 -1 4474543..4474902 + 119 28871112 - PSPTO_3966 - ISPsy5, Orf1 3873 61.23 0 4476573..4477253 - 226 28871113 exsB PSPTO_3968 - exsB protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0