version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3703 60.82 0 4293894..4294748 - 284 28870946 - PSPTO_3791 - rhomboid family protein 3704 61.93 0 4294763..4295734 - 323 28870947 - PSPTO_3792 - serine/threonine protein phosphatase 3705 61.84 0 4295734..4296624 - 296 28870948 ppnK PSPTO_3793 - inorganic polyphosphate/ATP-NAD kinase 3706 53.62 -1 4296666..4297079 + 137 28870949 - PSPTO_3794 - hypothetical protein 3707 49.66 -2 4297265..4297558 + 97 28870950 - PSPTO_3795 - hypothetical protein 3708 55.52 0 4297651..4298718 - 355 28870951 - PSPTO_3796 - GGDEF domain-containing protein 3709 65.65 +1 4299116..4300099 + 327 28870952 - PSPTO_3797 - hypothetical protein 3710 60.42 0 4300065..4301345 - 426 28870953 arsB PSPTO_3798 - arsenical pump membrane protein 3711 60.46 0 4301345..4302553 - 402 28870954 fsr PSPTO_3799 - fosmidomycin resistance protein 3712 53.27 -1 4303185..4304207 - 340 28870955 - PSPTO_3800 - ISPsy7, transposase 3713 63.00 +1 4304466..4305803 - 445 28870956 - PSPTO_3801 - major facilitator family transporter 3714 64.13 +1 4305951..4306895 - 314 28870957 - PSPTO_3802 - 1-aminocyclopropane-1-carboxylate deaminase, putative 3715 61.67 0 4306921..4308960 - 679 28870958 fadH PSPTO_3803 - 2,4-dienoyl-CoA reductase 3716 62.79 +1 4309166..4310299 + 377 28870959 - PSPTO_3804 - carbon-nitrogen family hydrolase 3717 62.73 0 4310302..4311342 + 346 28870960 - PSPTO_3805 - AraC family transcriptional regulator 3718 63.58 +1 4311900..4313423 + 507 28870961 ilvA-1 PSPTO_3806 - threonine dehydratase 3719 58.67 0 4313633..4314457 - 274 28870962 - PSPTO_3807 - putative lipoprotein 3720 54.00 -1 4314740..4316200 - 486 28870963 - PSPTO_3808 - ISPsy6, transposase 3721 64.33 +1 4316872..4317597 - 241 28870964 - PSPTO_3809 - oxidoreductase 3722 61.55 0 4317687..4318898 - 403 28870965 metZ PSPTO_3810 - O-succinylhomoserine sulfhydrylase 3723 58.71 0 4318919..4320427 - 502 28870966 purF PSPTO_3811 - amidophosphoribosyltransferase 3724 57.14 0 4320440..4321027 - 195 28870967 - PSPTO_3812 - cvpA family protein 3725 62.21 0 4321146..4321796 - 216 28870968 - PSPTO_3813 - hypothetical protein 3726 61.84 0 4321780..4323084 - 434 28870969 folC PSPTO_3814 - folylpolyglutamate synthase/dihydrofolate synthase 3727 60.04 0 4323081..4324001 - 306 28870970 accD PSPTO_3815 - acetyl-CoA carboxylase subunit beta 3728 62.32 0 4324254..4324874 - 206 28870971 trpF PSPTO_3816 - N-(5'-phosphoribosyl)anthranilate isomerase 3729 60.97 0 4324935..4325759 - 274 162533082 truA PSPTO_3817 - tRNA pseudouridine synthase A 3730 61.64 0 4325920..4328763 - 947 28870972 - PSPTO_3818 - hypothetical protein 3731 60.16 0 4328873..4329886 - 337 28870973 asd-2 PSPTO_3819 - aspartate-semialdehyde dehydrogenase 3732 57.58 0 4329972..4330532 - 186 28870974 - PSPTO_3820 - hypothetical protein 3733 60.20 0 4330552..4331154 - 200 28870975 - PSPTO_3821 - putative lipoprotein 3734 57.42 0 4331281..4331940 - 219 28870976 - PSPTO_3822 - TetR family transcriptional regulator 3735 58.82 0 4332060..4332722 - 220 28870977 - PSPTO_3823 - hypothetical protein 3736 61.58 0 4333052..4333837 - 261 28870978 - PSPTO_3824 - TatD family deoxyribonuclease 3737 59.38 0 4333852..4334208 - 118 28870979 pilZ PSPTO_3825 - type IV pilus biogenesis protein PilZ 3738 60.69 0 4334243..4335229 - 328 28870980 holB PSPTO_3826 - DNA polymerase III subunit delta' 3739 63.67 +1 4335222..4335854 - 210 28870981 tmk PSPTO_3827 - thymidylate kinase 3740 60.53 0 4335874..4337013 - 379 28870982 - PSPTO_3828 - hypothetical protein 3741 62.50 0 4337017..4337832 - 271 28870983 pabC PSPTO_3829 - 4-amino-4-deoxychorismate lyase 3742 61.37 0 4337832..4339076 - 414 28870984 fabF PSPTO_3830 - 3-oxoacyl-(acyl carrier protein) synthase II 3743 51.05 -1 4339190..4339426 - 78 28870985 acpP PSPTO_3831 - acyl carrier protein 3744 56.72 0 4339619..4340362 - 247 28870986 fabG PSPTO_3832 - 3-ketoacyl-(acyl-carrier-protein) reductase 3745 62.09 0 4340378..4341316 - 312 28870987 fabD PSPTO_3833 - malonyl CoA-acyl carrier protein transacylase 3746 60.22 0 4341433..4342425 - 330 28870988 plsX PSPTO_3834 - putative glycerol-3-phosphate acyltransferase PlsX 3747 53.55 -1 4342460..4342642 - 60 28870989 rpmF PSPTO_3835 - 50S ribosomal protein L32 3748 54.92 0 4342656..4343183 - 175 28870990 - PSPTO_3836 - hypothetical protein 3749 63.04 +1 4343290..4343868 + 192 28870991 maf-1 PSPTO_3837 - Maf-like protein 3750 57.06 0 4343921..4344919 - 332 28870992 sppA PSPTO_3838 - signal peptide peptidase SppA, 36K type 3751 59.73 0 4344943..4345605 - 220 28870993 - PSPTO_3839 - HAD-superfamily hydrolase 3752 60.50 0 4345595..4346551 - 318 170660217 rluC PSPTO_3840 - ribosomal large subunit pseudouridine synthase C 3753 61.85 0 4347221..4350607 + 1128 28870994 - PSPTO_3841 - ribonuclease, Rne/Rng family protein 3754 59.02 0 4350890..4351909 - 339 28870995 murB PSPTO_3842 - UDP-N-acetylenolpyruvoylglucosamine reductase 3755 62.22 0 4351944..4352708 - 254 28870996 kdsB PSPTO_3843 - 3-deoxy-manno-octulosonate cytidylyltransferase 3756 58.60 0 4352705..4352890 - 61 28870997 - PSPTO_3844 - hypothetical protein 3757 62.45 0 4352908..4353903 - 331 28870998 lpxK PSPTO_3845 - tetraacyldisaccharide 4'-kinase 3758 59.26 0 4353903..4354334 - 143 28870999 - PSPTO_3846 - biopolymer ExbD/TolR family transporter 3759 60.31 0 4354331..4354975 - 214 28871000 - PSPTO_3847 - MotA/TolQ/ExbB proton channel family protein 3760 64.55 +1 4355091..4357307 - 738 28871001 - PSPTO_3848 - DNA internalization-related competence protein ComEC/Rec2 3761 56.21 0 4357545..4359572 + 675 28871002 - PSPTO_3849 - Rhs element Vgr protein 3762 56.46 0 4359569..4360420 + 283 28871003 - PSPTO_3850 - hypothetical protein 3763 58.91 0 4360417..4363731 + 1104 28871004 - PSPTO_3851 - hypothetical protein 3764 55.16 0 4363695..4364615 + 306 28871005 - PSPTO_3852 - hypothetical protein 3765 54.89 0 4364612..4365511 + 299 28871006 - PSPTO_3853 - hypothetical protein 3766 58.56 0 4365545..4366333 - 262 28871007 - PSPTO_3854 - ABC transporter, permease protein 3767 56.91 0 4366330..4367262 - 310 28871008 - PSPTO_3855 - ABC transporter, ATP-binding protein 3768 61.86 0 4367430..4368053 - 207 28871009 - PSPTO_3856 - glutathione S-transferase family protein 3769 62.21 0 4368229..4370676 + 815 28871010 - PSPTO_3857 - acyl-CoA dehydrogenase 3770 59.37 0 4370753..4371163 + 136 28871011 - PSPTO_3858 - hypothetical protein 3771 60.70 0 4371357..4372211 + 284 28871012 - PSPTO_3859 - hypothetical protein 3772 59.51 0 4372314..4374983 - 889 28871013 aceE-1 PSPTO_3860 - 2-oxoacid dehydrogenase subunit E1 3773 64.24 +1 4375128..4375580 + 150 28871014 - PSPTO_3861 - MarR family transcriptional regulator 3774 62.95 +1 4375583..4376686 - 367 28871015 - PSPTO_3862 - hypothetical protein 3775 51.75 -1 4376977..4377720 + 247 28871016 psyR PSPTO_3863 - transcriptional regulator PsyR 3776 55.37 0 4377652..4378386 - 244 28871017 psyI PSPTO_3864 - autoinducer synthesis protein PsyI 3777 56.14 0 4378606..4379802 + 398 28871018 - PSPTO_3865 - hypothetical protein 3778 57.30 0 4379795..4380328 + 177 28871019 - PSPTO_3866 - hypothetical protein 3779 59.40 0 4380318..4381115 + 265 28871020 - PSPTO_3867 - dihydrodipicolinate synthetase family protein 3780 57.93 0 4381115..4381972 + 285 28871021 - PSPTO_3868 - hypothetical protein 3781 61.60 0 4381956..4382192 + 78 28871022 - PSPTO_3869 - hypothetical protein 3782 61.34 0 4382255..4383436 - 393 28871023 - PSPTO_3870 - patatin family protein 3783 58.95 0 4383469..4384401 - 310 28871024 htrB PSPTO_3871 - lipid A biosynthesis lauroyl acyltransferase 3784 60.73 0 4384522..4385262 + 246 28871025 minC PSPTO_3872 - septum formation inhibitor 3785 58.79 0 4385492..4386304 + 270 28871026 minD PSPTO_3873 - septum site-determining protein MinD 3786 50.98 -1 4386304..4386558 + 84 28871027 minE PSPTO_3874 - cell division topological specificity factor MinE 3787 59.91 0 4386649..4387284 + 211 162533083 rluA PSPTO_3875 - ribosomal large subunit pseudouridine synthase A 3788 60.62 0 4387656..4388945 + 429 28871028 - PSPTO_3876 - putative aminopeptidase 2 3789 59.86 0 4389003..4389722 - 239 28871029 - PSPTO_3877 - GntR family transcriptional regulator 3790 56.84 0 4390080..4391147 + 355 28871030 - PSPTO_3878 - ABC transporter, periplasmic substrate-binding protein 3791 61.92 0 4391168..4392031 + 287 28871031 - PSPTO_3879 - hypothetical protein 3792 58.72 0 4392028..4392870 + 280 28871032 - PSPTO_3880 - polyamine ABC transporter, permease protein, putative 3793 59.40 0 4392857..4393654 + 265 28871033 - PSPTO_3881 - polyamine ABC transporter, permease protein, putative 3794 61.11 0 4393656..4394645 + 329 28871034 - PSPTO_3882 - polyamine ABC transporter, ATP-binding protein, putative 3795 59.11 0 4394799..4395380 + 193 28871035 - PSPTO_3883 - HAD-superfamily hydrolase 3796 62.10 0 4395399..4396361 - 320 28871036 - PSPTO_3884 - oxidoreductase, zinc-binding 3797 58.36 0 4396500..4398581 + 693 28871037 prc PSPTO_3885 - tail-specific protease 3798 60.01 0 4398715..4400487 + 590 28871038 - PSPTO_3886 - EAL/GGDEF domain-containing protein 3799 66.39 +1 4400679..4401044 - 121 28871039 - PSPTO_3887 - hypothetical protein 3800 63.45 +1 4401047..4401388 - 113 28871040 - PSPTO_3888 - hypothetical protein 3801 59.95 0 4401489..4401890 - 133 28871041 - PSPTO_3889 - hypothetical protein 3802 56.20 0 4402330..4403103 - 257 28871042 - PSPTO_3890 - peptidyl-prolyl cis-trans isomerase, FKBP-type 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0