version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3649 55.93 0 4221575..4222375 - 266 28870892 - PSPTO_3737 - ABC transporter, permease protein 3650 58.13 0 4222386..4223252 - 288 28870893 - PSPTO_3738 - ABC transporter, permease protein 3651 57.97 0 4223245..4224360 - 371 28870894 - PSPTO_3739 - ABC transporter, ATP-binding protein 3652 59.45 0 4224360..4225454 - 364 28870895 - PSPTO_3740 - ABC transporter, ATP-binding protein 3653 59.33 0 4225753..4227606 + 617 28870896 - PSPTO_3741 - sigma-54 dependent transcriptional regulator 3654 60.74 0 4227791..4229173 - 460 28870897 cysS PSPTO_3742 - cysteinyl-tRNA synthetase 3655 59.59 0 4229193..4230902 - 569 28870898 glnS PSPTO_3743 - glutaminyl-tRNA synthetase 3656 54.37 -1 4231095..4231598 + 167 28870899 ppiB PSPTO_3744 - peptidyl-prolyl cis-trans isomerase B 3657 59.97 0 4231595..4232341 + 248 28870900 lpxH PSPTO_3745 - UDP-2,3-diacylglucosamine hydrolase 3658 53.27 -1 4232799..4233821 - 340 28870901 - PSPTO_3746 - ISPsy7, transposase 3659 60.82 0 4234161..4235699 - 512 28870902 - PSPTO_3747 - EmrB/QacA family drug resistance transporter 3660 61.46 0 4235726..4236934 - 402 28870903 - PSPTO_3748 - multidrug resistance protein 3661 57.87 0 4237025..4237513 - 162 28870904 - PSPTO_3749 - multiple antibiotic resistance protein MarR, putative 3662 58.65 0 4237660..4238283 - 207 28870905 - PSPTO_3750 - hypothetical protein 3663 59.02 0 4238367..4238837 - 156 28870906 - PSPTO_3751 - hypothetical protein 3664 61.32 0 4239241..4241841 + 866 28870907 acnB PSPTO_3752 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 3665 55.40 0 4242087..4243355 - 422 28870908 - PSPTO_3753 - methyl-accepting chemotaxis protein 3666 50.67 -1 4243461..4244354 - 297 28870909 - PSPTO_3754 - hypothetical protein 3667 59.51 0 4245060..4245632 + 190 28870910 - PSPTO_3755 - hypothetical protein 3668 55.90 0 4245936..4247096 + 386 28870911 - PSPTO_3756 - hypothetical protein 3669 61.33 0 4249716..4254572 - 1618 28870912 - PSPTO_3757 - hypothetical protein 3670 62.00 0 4255345..4256094 + 249 28870913 - PSPTO_3758 - hypothetical protein 3671 62.92 +1 4256300..4257259 + 319 28870914 - PSPTO_3759 - moxR protein, putative 3672 63.39 +1 4257264..4258208 + 314 28870915 - PSPTO_3760 - hypothetical protein 3673 64.85 +1 4258205..4258699 + 164 28870916 - PSPTO_3761 - hypothetical protein 3674 63.64 +1 4258692..4259750 + 352 28870917 - PSPTO_3762 - von Willebrand factor type A domain-containing protein 3675 64.98 +1 4259747..4261465 + 572 28870918 - PSPTO_3763 - TPR domain-containing protein 3676 63.89 +1 4261462..4263117 + 551 28870919 - PSPTO_3764 - hypothetical protein 3677 63.69 +1 4263160..4264404 + 414 28870920 sbcD PSPTO_3765 - exonuclease SbcD 3678 61.95 0 4264401..4268045 + 1214 28870921 sbcC PSPTO_3766 - exonuclease SbcC 3679 52.49 -1 4268271..4268531 + 86 28870922 - PSPTO_3767 - hypothetical protein 3680 57.63 0 4268669..4269841 - 390 28870923 - PSPTO_3768 - hypothetical protein 3681 56.64 0 4269921..4270319 - 132 28870924 - PSPTO_3769 - hypothetical protein 3682 60.83 0 4270412..4271404 - 330 28870925 - PSPTO_3770 - hypothetical protein 3683 59.79 0 4271484..4272791 - 435 28870926 - PSPTO_3771 - major facilitator family transporter 3684 61.27 0 4273005..4274747 + 580 28870927 - PSPTO_3772 - dihydroxy-acid dehydratase 3685 62.75 0 4274862..4275575 + 237 28870928 - PSPTO_3773 - GntR family transcriptional regulator 3686 54.19 -1 4275912..4276496 + 194 28870929 - PSPTO_3774 - hypothetical protein 3687 59.30 0 4276503..4276787 + 94 28870930 - PSPTO_3775 - hypothetical protein 3688 47.43 -2 4277420..4277866 + 148 28870931 - PSPTO_3776 - hypothetical protein 3689 57.97 0 4278166..4280556 - 796 28870932 - PSPTO_3777 - hypothetical protein 3690 61.29 0 4280584..4281606 - 340 28870933 - PSPTO_3778 - BNR/Asp-box repeat-containing protein 3691 60.69 0 4281838..4283193 - 451 28870934 - PSPTO_3779 - hypothetical protein 3692 58.03 0 4283714..4284871 - 385 28870935 - PSPTO_3780 - glutathionylspermidine synthase family protein 3693 61.27 0 4284883..4285605 - 240 28870936 - PSPTO_3781 - hypothetical protein 3694 59.07 0 4285657..4286064 - 135 28870937 - PSPTO_3782 - hypothetical protein 3695 59.36 0 4286096..4286752 - 218 28870938 - PSPTO_3783 - hypothetical protein 3696 59.26 0 4286749..4287774 - 341 28870939 - PSPTO_3784 - potassium channel protein, putative 3697 58.24 0 4287862..4288419 - 185 28870940 - PSPTO_3785 - rhomboid family protein 3698 61.58 0 4288450..4289157 - 235 28870941 - PSPTO_3786 - PspA/IM30 family protein 3699 55.50 0 4289184..4289837 - 217 28870942 - PSPTO_3787 - hypothetical protein 3700 60.25 0 4290096..4292762 - 888 28870943 pepN PSPTO_3788 - aminopeptidase N 3701 59.05 0 4292775..4293575 - 266 28870944 - PSPTO_3789 - hypothetical protein 3702 54.02 -1 4293605..4293865 - 86 28870945 - PSPTO_3790 - hypothetical protein 3703 60.82 0 4293894..4294748 - 284 28870946 - PSPTO_3791 - rhomboid family protein 3704 61.93 0 4294763..4295734 - 323 28870947 - PSPTO_3792 - serine/threonine protein phosphatase 3705 61.84 0 4295734..4296624 - 296 28870948 ppnK PSPTO_3793 - inorganic polyphosphate/ATP-NAD kinase 3706 53.62 -1 4296666..4297079 + 137 28870949 - PSPTO_3794 - hypothetical protein 3707 49.66 -2 4297265..4297558 + 97 28870950 - PSPTO_3795 - hypothetical protein 3708 55.52 0 4297651..4298718 - 355 28870951 - PSPTO_3796 - GGDEF domain-containing protein 3709 65.65 +1 4299116..4300099 + 327 28870952 - PSPTO_3797 - hypothetical protein 3710 60.42 0 4300065..4301345 - 426 28870953 arsB PSPTO_3798 - arsenical pump membrane protein 3711 60.46 0 4301345..4302553 - 402 28870954 fsr PSPTO_3799 - fosmidomycin resistance protein 3712 53.27 -1 4303185..4304207 - 340 28870955 - PSPTO_3800 - ISPsy7, transposase 3713 63.00 +1 4304466..4305803 - 445 28870956 - PSPTO_3801 - major facilitator family transporter 3714 64.13 +1 4305951..4306895 - 314 28870957 - PSPTO_3802 - 1-aminocyclopropane-1-carboxylate deaminase, putative 3715 61.67 0 4306921..4308960 - 679 28870958 fadH PSPTO_3803 - 2,4-dienoyl-CoA reductase 3716 62.79 +1 4309166..4310299 + 377 28870959 - PSPTO_3804 - carbon-nitrogen family hydrolase 3717 62.73 0 4310302..4311342 + 346 28870960 - PSPTO_3805 - AraC family transcriptional regulator 3718 63.58 +1 4311900..4313423 + 507 28870961 ilvA-1 PSPTO_3806 - threonine dehydratase 3719 58.67 0 4313633..4314457 - 274 28870962 - PSPTO_3807 - putative lipoprotein 3720 54.00 -1 4314740..4316200 - 486 28870963 - PSPTO_3808 - ISPsy6, transposase 3721 64.33 +1 4316872..4317597 - 241 28870964 - PSPTO_3809 - oxidoreductase 3722 61.55 0 4317687..4318898 - 403 28870965 metZ PSPTO_3810 - O-succinylhomoserine sulfhydrylase 3723 58.71 0 4318919..4320427 - 502 28870966 purF PSPTO_3811 - amidophosphoribosyltransferase 3724 57.14 0 4320440..4321027 - 195 28870967 - PSPTO_3812 - cvpA family protein 3725 62.21 0 4321146..4321796 - 216 28870968 - PSPTO_3813 - hypothetical protein 3726 61.84 0 4321780..4323084 - 434 28870969 folC PSPTO_3814 - folylpolyglutamate synthase/dihydrofolate synthase 3727 60.04 0 4323081..4324001 - 306 28870970 accD PSPTO_3815 - acetyl-CoA carboxylase subunit beta 3728 62.32 0 4324254..4324874 - 206 28870971 trpF PSPTO_3816 - N-(5'-phosphoribosyl)anthranilate isomerase 3729 60.97 0 4324935..4325759 - 274 162533082 truA PSPTO_3817 - tRNA pseudouridine synthase A 3730 61.64 0 4325920..4328763 - 947 28870972 - PSPTO_3818 - hypothetical protein 3731 60.16 0 4328873..4329886 - 337 28870973 asd-2 PSPTO_3819 - aspartate-semialdehyde dehydrogenase 3732 57.58 0 4329972..4330532 - 186 28870974 - PSPTO_3820 - hypothetical protein 3733 60.20 0 4330552..4331154 - 200 28870975 - PSPTO_3821 - putative lipoprotein 3734 57.42 0 4331281..4331940 - 219 28870976 - PSPTO_3822 - TetR family transcriptional regulator 3735 58.82 0 4332060..4332722 - 220 28870977 - PSPTO_3823 - hypothetical protein 3736 61.58 0 4333052..4333837 - 261 28870978 - PSPTO_3824 - TatD family deoxyribonuclease 3737 59.38 0 4333852..4334208 - 118 28870979 pilZ PSPTO_3825 - type IV pilus biogenesis protein PilZ 3738 60.69 0 4334243..4335229 - 328 28870980 holB PSPTO_3826 - DNA polymerase III subunit delta' 3739 63.67 +1 4335222..4335854 - 210 28870981 tmk PSPTO_3827 - thymidylate kinase 3740 60.53 0 4335874..4337013 - 379 28870982 - PSPTO_3828 - hypothetical protein 3741 62.50 0 4337017..4337832 - 271 28870983 pabC PSPTO_3829 - 4-amino-4-deoxychorismate lyase 3742 61.37 0 4337832..4339076 - 414 28870984 fabF PSPTO_3830 - 3-oxoacyl-(acyl carrier protein) synthase II 3743 51.05 -1 4339190..4339426 - 78 28870985 acpP PSPTO_3831 - acyl carrier protein 3744 56.72 0 4339619..4340362 - 247 28870986 fabG PSPTO_3832 - 3-ketoacyl-(acyl-carrier-protein) reductase 3745 62.09 0 4340378..4341316 - 312 28870987 fabD PSPTO_3833 - malonyl CoA-acyl carrier protein transacylase 3746 60.22 0 4341433..4342425 - 330 28870988 plsX PSPTO_3834 - putative glycerol-3-phosphate acyltransferase PlsX 3747 53.55 -1 4342460..4342642 - 60 28870989 rpmF PSPTO_3835 - 50S ribosomal protein L32 3748 54.92 0 4342656..4343183 - 175 28870990 - PSPTO_3836 - hypothetical protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0