version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3604 59.89 0 4160122..4162290 + 722 28870847 - PSPTO_3692 - TonB-dependent siderophore receptor 3605 60.07 0 4162721..4163008 + 95 28870848 - PSPTO_3693 - hypothetical protein 3606 58.13 0 4163440..4165758 + 772 28870849 - PSPTO_3694 - glycosy hydrolase family protein 3607 54.03 -1 4165817..4166473 - 218 28870850 - PSPTO_3695 - TetR family transcriptional regulator 3608 61.15 0 4166962..4169445 + 827 28870851 - PSPTO_3696 - sensory box histidine kinase/response regulator 3609 59.83 0 4169483..4169599 + 38 28870852 - PSPTO_3697 - hypothetical protein 3610 59.77 0 4169607..4170215 + 202 28870853 - PSPTO_3698 - TetR family transcriptional regulator 3611 58.58 0 4170590..4172221 + 543 28870854 - PSPTO_3699 - methyl-accepting chemotaxis protein 3612 61.68 0 4172325..4173146 + 273 28870855 - PSPTO_3700 - aldo/keto reductase family oxidoreductase 3613 60.29 0 4173317..4174336 + 339 28870856 - PSPTO_3701 - cation transporter, putative 3614 61.51 0 4174615..4176069 + 484 28870857 - PSPTO_3702 - phosphate transporter family protein 3615 62.63 0 4176175..4177338 - 387 28870858 - PSPTO_3703 - HlyD family secretion protein 3616 61.08 0 4177335..4178963 - 542 28870859 - PSPTO_3704 - transporter, putative 3617 60.75 0 4179326..4180423 + 365 28870860 - PSPTO_3705 - enoly-CoA hydratase/isomerase family protein 3618 60.50 0 4180427..4181578 + 383 28870861 acdA PSPTO_3706 - acyl-CoA dehydrogenase 3619 56.57 0 4181623..4186854 - 1743 28870862 - PSPTO_3707 - hypothetical protein 3620 57.78 0 4186991..4187575 - 194 162533073 - PSPTO_3708 - FMN reductase, NADPH-dependent 3621 51.93 -1 4187546..4187986 + 146 28870864 - PSPTO_3709 - hypothetical protein 3622 57.30 0 4188036..4188590 - 184 28870865 - PSPTO_3710 - acetyltransferase 3623 60.59 0 4188612..4189385 - 257 28870866 dnaQ PSPTO_3711 - DNA polymerase III subunit epsilon 3624 62.03 0 4189457..4189909 - 150 28870867 rnhA PSPTO_3712 - ribonuclease H 3625 64.30 +1 4189956..4190717 - 253 28870868 - PSPTO_3713 - hypothetical protein 3626 61.15 0 4190799..4191578 + 259 28870869 - PSPTO_3714 - hydroxyacylglutathione hydrolase, putative 3627 60.33 0 4191678..4193270 + 530 28870870 mltD PSPTO_3715 - membrane-bound lytic murein transglycosylase D 3628 60.87 0 4193408..4195237 + 609 28870871 - PSPTO_3716 - ABC transporter, periplasmic substrate-binding protein 3629 59.40 0 4195234..4197090 + 618 28870872 - PSPTO_3717 - ABC transporter, periplasmic substrate-binding protein 3630 57.36 0 4197092..4198165 + 357 28870873 - PSPTO_3718 - ABC transporter, permease protein 3631 60.59 0 4198167..4199186 + 339 28870874 - PSPTO_3719 - ABC transporter, permease protein 3632 59.65 0 4199188..4200798 + 536 28870875 - PSPTO_3720 - ABC transporter, ATP-binding protein 3633 62.01 0 4200823..4201617 + 264 28870876 fabI PSPTO_3721 - enoyl-(acyl-carrier-protein) reductase 3634 56.32 0 4201727..4203610 - 627 28870877 - PSPTO_3722 - peptidyl-prolyl cis-trans isomerase D, putative 3635 53.11 -1 4203816..4204088 - 90 28870878 hupB PSPTO_3723 - DNA-binding protein HU-beta 3636 56.82 0 4204235..4206631 - 798 28870879 lon-1 PSPTO_3724 - ATP-dependent protease La 3637 57.09 0 4206842..4208125 - 427 28870880 clpX PSPTO_3725 - ATP-dependent protease ATP-binding subunit 3638 57.30 0 4208232..4208882 - 216 28870881 clpP-2 PSPTO_3726 - ATP-dependent Clp protease proteolytic subunit 3639 55.99 0 4208965..4210275 - 436 28870882 tig PSPTO_3727 - trigger factor 3640 54.70 0 4210718..4210834 - 38 28870883 - PSPTO_3728 - hypothetical protein 3641 47.29 -2 4211413..4211892 + 159 28870884 - PSPTO_3729 - putative lipoprotein 3642 49.22 -2 4212288..4214144 - 618 28870885 - PSPTO_3730 - hypothetical protein 3643 54.19 -1 4214279..4215256 + 325 28870886 - PSPTO_3731 - ISPssy, transposase 3644 52.08 -1 4215455..4215694 - 79 28870887 - PSPTO_3732 - hypothetical protein 3645 63.74 +1 4216904..4217758 + 284 28870888 folD-2 PSPTO_3733 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 3646 54.07 -1 4217893..4219353 - 486 28870889 - PSPTO_3734 - ISPsy6, transposase 3647 57.64 0 4219432..4221204 - 590 28870890 - PSPTO_3735 - ABC transporter, periplasmic substrate-binding protein, putative 3648 56.78 0 4221290..4221562 - 90 28870891 - PSPTO_3736 - hypothetical protein 3649 55.93 0 4221575..4222375 - 266 28870892 - PSPTO_3737 - ABC transporter, permease protein 3650 58.13 0 4222386..4223252 - 288 28870893 - PSPTO_3738 - ABC transporter, permease protein 3651 57.97 0 4223245..4224360 - 371 28870894 - PSPTO_3739 - ABC transporter, ATP-binding protein 3652 59.45 0 4224360..4225454 - 364 28870895 - PSPTO_3740 - ABC transporter, ATP-binding protein 3653 59.33 0 4225753..4227606 + 617 28870896 - PSPTO_3741 - sigma-54 dependent transcriptional regulator 3654 60.74 0 4227791..4229173 - 460 28870897 cysS PSPTO_3742 - cysteinyl-tRNA synthetase 3655 59.59 0 4229193..4230902 - 569 28870898 glnS PSPTO_3743 - glutaminyl-tRNA synthetase 3656 54.37 -1 4231095..4231598 + 167 28870899 ppiB PSPTO_3744 - peptidyl-prolyl cis-trans isomerase B 3657 59.97 0 4231595..4232341 + 248 28870900 lpxH PSPTO_3745 - UDP-2,3-diacylglucosamine hydrolase 3658 53.27 -1 4232799..4233821 - 340 28870901 - PSPTO_3746 - ISPsy7, transposase 3659 60.82 0 4234161..4235699 - 512 28870902 - PSPTO_3747 - EmrB/QacA family drug resistance transporter 3660 61.46 0 4235726..4236934 - 402 28870903 - PSPTO_3748 - multidrug resistance protein 3661 57.87 0 4237025..4237513 - 162 28870904 - PSPTO_3749 - multiple antibiotic resistance protein MarR, putative 3662 58.65 0 4237660..4238283 - 207 28870905 - PSPTO_3750 - hypothetical protein 3663 59.02 0 4238367..4238837 - 156 28870906 - PSPTO_3751 - hypothetical protein 3664 61.32 0 4239241..4241841 + 866 28870907 acnB PSPTO_3752 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 3665 55.40 0 4242087..4243355 - 422 28870908 - PSPTO_3753 - methyl-accepting chemotaxis protein 3666 50.67 -1 4243461..4244354 - 297 28870909 - PSPTO_3754 - hypothetical protein 3667 59.51 0 4245060..4245632 + 190 28870910 - PSPTO_3755 - hypothetical protein 3668 55.90 0 4245936..4247096 + 386 28870911 - PSPTO_3756 - hypothetical protein 3669 61.33 0 4249716..4254572 - 1618 28870912 - PSPTO_3757 - hypothetical protein 3670 62.00 0 4255345..4256094 + 249 28870913 - PSPTO_3758 - hypothetical protein 3671 62.92 +1 4256300..4257259 + 319 28870914 - PSPTO_3759 - moxR protein, putative 3672 63.39 +1 4257264..4258208 + 314 28870915 - PSPTO_3760 - hypothetical protein 3673 64.85 +1 4258205..4258699 + 164 28870916 - PSPTO_3761 - hypothetical protein 3674 63.64 +1 4258692..4259750 + 352 28870917 - PSPTO_3762 - von Willebrand factor type A domain-containing protein 3675 64.98 +1 4259747..4261465 + 572 28870918 - PSPTO_3763 - TPR domain-containing protein 3676 63.89 +1 4261462..4263117 + 551 28870919 - PSPTO_3764 - hypothetical protein 3677 63.69 +1 4263160..4264404 + 414 28870920 sbcD PSPTO_3765 - exonuclease SbcD 3678 61.95 0 4264401..4268045 + 1214 28870921 sbcC PSPTO_3766 - exonuclease SbcC 3679 52.49 -1 4268271..4268531 + 86 28870922 - PSPTO_3767 - hypothetical protein 3680 57.63 0 4268669..4269841 - 390 28870923 - PSPTO_3768 - hypothetical protein 3681 56.64 0 4269921..4270319 - 132 28870924 - PSPTO_3769 - hypothetical protein 3682 60.83 0 4270412..4271404 - 330 28870925 - PSPTO_3770 - hypothetical protein 3683 59.79 0 4271484..4272791 - 435 28870926 - PSPTO_3771 - major facilitator family transporter 3684 61.27 0 4273005..4274747 + 580 28870927 - PSPTO_3772 - dihydroxy-acid dehydratase 3685 62.75 0 4274862..4275575 + 237 28870928 - PSPTO_3773 - GntR family transcriptional regulator 3686 54.19 -1 4275912..4276496 + 194 28870929 - PSPTO_3774 - hypothetical protein 3687 59.30 0 4276503..4276787 + 94 28870930 - PSPTO_3775 - hypothetical protein 3688 47.43 -2 4277420..4277866 + 148 28870931 - PSPTO_3776 - hypothetical protein 3689 57.97 0 4278166..4280556 - 796 28870932 - PSPTO_3777 - hypothetical protein 3690 61.29 0 4280584..4281606 - 340 28870933 - PSPTO_3778 - BNR/Asp-box repeat-containing protein 3691 60.69 0 4281838..4283193 - 451 28870934 - PSPTO_3779 - hypothetical protein 3692 58.03 0 4283714..4284871 - 385 28870935 - PSPTO_3780 - glutathionylspermidine synthase family protein 3693 61.27 0 4284883..4285605 - 240 28870936 - PSPTO_3781 - hypothetical protein 3694 59.07 0 4285657..4286064 - 135 28870937 - PSPTO_3782 - hypothetical protein 3695 59.36 0 4286096..4286752 - 218 28870938 - PSPTO_3783 - hypothetical protein 3696 59.26 0 4286749..4287774 - 341 28870939 - PSPTO_3784 - potassium channel protein, putative 3697 58.24 0 4287862..4288419 - 185 28870940 - PSPTO_3785 - rhomboid family protein 3698 61.58 0 4288450..4289157 - 235 28870941 - PSPTO_3786 - PspA/IM30 family protein 3699 55.50 0 4289184..4289837 - 217 28870942 - PSPTO_3787 - hypothetical protein 3700 60.25 0 4290096..4292762 - 888 28870943 pepN PSPTO_3788 - aminopeptidase N 3701 59.05 0 4292775..4293575 - 266 28870944 - PSPTO_3789 - hypothetical protein 3702 54.02 -1 4293605..4293865 - 86 28870945 - PSPTO_3790 - hypothetical protein 3703 60.82 0 4293894..4294748 - 284 28870946 - PSPTO_3791 - rhomboid family protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0