version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2623 60.44 0 2971649..2972788 + 379 28869864 fdhA-2 PSPTO_2676 - glutathione-independent formaldehyde dehydrogenase 2624 59.81 0 2972883..2973743 + 286 28869865 - PSPTO_2677 - short chain dehydrogenase/reductase family oxidoreductase 2625 59.59 0 2973945..2974919 + 324 28869866 hopP1 PSPTO_2678 - type III helper protein HopP1 2626 60.16 0 2974894..2975016 + 40 28869867 - PSPTO_2679 - hypothetical protein 2627 61.71 0 2975356..2976786 + 476 28869868 gabD-3 PSPTO_2680 - succinate-semialdehyde dehydrogenase 2628 56.73 0 2976862..2977797 - 311 28869869 pbpG PSPTO_2681 - D-alanyl-D-alanine endopeptidase 2629 59.33 0 2978050..2978649 - 199 28869870 - PSPTO_2682 - hypothetical protein 2630 64.48 +1 2978728..2978910 - 60 28869871 - PSPTO_2683 - hypothetical protein 2631 64.43 +1 2979083..2979439 - 118 28869872 - PSPTO_2684 - hypothetical protein 2632 59.97 0 2979641..2980417 + 258 28869873 - PSPTO_2685 - shikimate 5-dehydrogenase 2633 63.21 +1 2980482..2981147 - 221 28869874 - PSPTO_2686 - hypothetical protein 2634 57.80 0 2981249..2981812 + 187 28869875 - PSPTO_2687 - hypothetical protein 2635 62.42 0 2982076..2983230 + 384 28869876 - PSPTO_2688 - major facilitator family transporter 2636 59.58 0 2983227..2984129 - 300 28869877 - PSPTO_2689 - LysR family transcriptional regulator 2637 48.97 -2 2984262..2984504 + 80 28869878 - PSPTO_2690 - putative lipoprotein 2638 55.64 0 2984539..2985300 + 253 28869879 - PSPTO_2691 - TerC family membrane protein 2639 59.44 0 2985402..2985581 - 59 28869880 - PSPTO_2692 - hypothetical protein 2640 60.34 0 2985801..2986496 + 231 28869881 - PSPTO_2693 - hypothetical protein 2641 60.75 0 2986568..2987851 - 427 28869882 - PSPTO_2694 - hypothetical protein 2642 60.83 0 2988478..2989539 - 353 28869883 - PSPTO_2695 - hypothetical protein 2643 55.56 0 2989651..2990037 - 128 28869884 - PSPTO_2696 - mutT/nudix family protein 2644 58.77 0 2990361..2991437 - 358 28869885 - PSPTO_2697 - oxidoreductase, zinc-binding 2645 59.37 0 2991704..2992018 + 104 28869886 - PSPTO_2698 - hypothetical protein 2646 60.08 0 2992163..2994622 + 819 28869887 - PSPTO_2699 - GAF domain/GGDEF domain/EAL domain-containing protein 2647 56.76 0 2994802..2995356 + 184 28869888 - PSPTO_2700 - hypothetical protein 2648 61.87 0 2995844..2996782 - 312 28869889 - PSPTO_2701 - fructokinase 2649 63.29 +1 2996807..2998288 - 493 28869890 xylB PSPTO_2702 - xylulokinase 2650 59.99 0 2998299..2999780 - 493 28869891 uxuB PSPTO_2703 - D-mannonate oxidoreductase 2651 58.15 0 3000944..3001777 - 277 28869892 - PSPTO_2705 - mannitol ABC transporter, permease protein 2652 58.41 0 3001788..3002720 - 310 28869893 - PSPTO_2706 - mannitol ABC transporter, permease protein 2653 58.88 0 3002808..3004130 - 440 28869894 - PSPTO_2707 - mannitol ABC transporter, periplasmic mannitol-binding protein 2654 55.41 0 3004371..3005276 - 301 28869895 mltR PSPTO_2708 - transcriptional activator MltR 2655 61.07 0 3005404..3006189 + 261 28869896 - PSPTO_2709 - precorrin 6A synthase 2656 62.03 0 3006174..3007382 - 402 28869897 - PSPTO_2710 - hypothetical protein 2657 57.78 0 3007489..3007848 - 119 28869898 - PSPTO_2711 - response regulator 2658 59.81 0 3008195..3011707 + 1170 28869899 - PSPTO_2712 - sensor histidine kinase/response regulator 2659 55.48 0 3011736..3012602 + 288 28869900 - PSPTO_2713 - chemotaxis protein methyltransferase CheR, putative 2660 57.07 0 3012599..3013213 + 204 28869901 - PSPTO_2714 - protein-glutamate methylesterase, putative 2661 57.87 0 3013207..3014388 + 393 28869902 - PSPTO_2715 - sensor histidine kinase/response regulator 2662 55.56 0 3014480..3014857 + 125 28869903 - PSPTO_2716 - response regulator 2663 60.61 0 3014885..3016915 - 676 28869904 - PSPTO_2717 - sensory box histidine kinase/response regulator 2664 57.98 0 3016912..3018396 - 494 28869905 - PSPTO_2718 - hypothetical protein 2665 58.43 0 3018617..3019429 + 270 28869906 - PSPTO_2719 - enoyl-CoA hydratase 2666 60.81 0 3019482..3020318 + 278 28869907 - PSPTO_2720 - NADH pyrophosphatase 2667 63.21 +1 3020286..3021065 - 259 28869908 - PSPTO_2721 - hypothetical protein 2668 64.49 +1 3021171..3022319 - 382 28869909 - PSPTO_2722 - Gfo/Idh/MocA family oxidoreductase 2669 57.42 0 3022420..3023187 - 255 28869910 - PSPTO_2723 - short chain dehydrogenase 2670 59.08 0 3023215..3024282 - 355 28869911 - PSPTO_2724 - hypothetical protein 2671 55.97 0 3024485..3024802 - 105 28869912 - PSPTO_2725 - SCP-2 sterol transfer family protein 2672 60.90 0 3024858..3025568 - 236 28869913 - PSPTO_2726 - hypothetical protein 2673 48.96 -2 3025629..3025724 - 31 28869914 - PSPTO_2727 - hypothetical protein 2674 58.55 0 3025774..3026796 + 340 28869915 - PSPTO_2728 - putative periplasmic protease 2675 58.18 0 3027056..3027550 - 164 28869916 - PSPTO_2729 - hypothetical protein 2676 60.76 0 3027534..3029192 - 552 28869917 cysI PSPTO_2730 - sulphite reductase 2677 60.71 0 3029769..3030842 + 357 28869918 - PSPTO_2731 - sugar-binding domain-containing protein 2678 60.22 0 3030852..3034571 - 1239 28869919 metH PSPTO_2732 - B12-dependent methionine synthase 2679 59.88 0 3034729..3037041 + 770 28869920 cti PSPTO_2733 - esterified fatty acid cis/trans isomerase 2680 56.21 0 3037217..3038239 + 340 28869921 - PSPTO_2734 - acetyltransferase family protein 2681 57.74 0 3038310..3038903 + 197 28869922 yhgI PSPTO_2735 - yhgI protein 2682 62.26 0 3039164..3041113 - 649 28869923 - PSPTO_2736 - biotin carboxylase/biotin-containing subunit 2683 61.84 0 3041110..3041958 - 282 28869924 - PSPTO_2737 - gamma-carboxygeranoyl-CoA hydratase 2684 61.75 0 3041973..3043580 - 535 28869925 - PSPTO_2738 - carboxyl transferase domain-containing protein 2685 60.19 0 3043594..3044937 - 447 28869926 - PSPTO_2739 - acyl-CoA dehydrogenase, putative 2686 59.24 0 3045260..3046282 + 340 28869927 - PSPTO_2740 - ISPsy4, transposase 2687 57.78 0 3046279..3047088 + 269 28869928 - PSPTO_2741 - transposase/IS protein 2688 62.00 0 3047462..3048361 - 299 28869929 mvaB PSPTO_2742 - hydroxymethylglutaryl-CoA lyase 2689 58.52 0 3048392..3048784 - 130 28869930 - PSPTO_2743 - MerR family transcriptional regulator 2690 60.00 0 3048952..3049881 - 309 28869931 - PSPTO_2744 - LysR family transcriptional regulator 2691 62.28 0 3050066..3051295 + 409 28869932 - PSPTO_2745 - acyl-CoA dehydrogenase family protein 2692 62.68 0 3051325..3052680 - 451 28869933 - PSPTO_2746 - OmpA family protein 2693 59.04 0 3052800..3053612 - 270 28869934 xthA PSPTO_2747 - exonuclease III 2694 58.18 0 3053803..3054474 + 223 28869935 - PSPTO_2748 - hypothetical protein 2695 59.71 0 3054534..3056258 + 574 28869936 - PSPTO_2749 - hypothetical protein 2696 62.63 0 3056255..3059944 + 1229 28869937 - PSPTO_2750 - hypothetical protein 2697 62.64 0 3060050..3060967 + 305 28869938 - PSPTO_2751 - LysR family transcriptional regulator 2698 58.08 0 3061058..3061558 + 166 28869939 tpx PSPTO_2752 - thiol peroxidase 2699 58.58 0 3061677..3063011 + 444 28869940 - PSPTO_2753 - HlyD family secretion protein 2700 60.59 0 3066116..3069223 + 1035 28869941 - PSPTO_2755 - AcrB/AcrD/AcrF family protein 2701 63.54 +1 3069220..3070692 + 490 28869942 - PSPTO_2756 - outer membrane efflux protein 2702 59.42 0 3070860..3072971 + 703 28869943 - PSPTO_2757 - GGDEF domain/EAL domain-containing protein 2703 60.51 0 3073084..3073830 + 248 28869944 - PSPTO_2758 - short chain dehydrogenase/reductase family oxidoreductase 2704 63.39 +1 3073877..3074059 - 60 28869945 - PSPTO_2759 - hypothetical protein 2705 59.39 0 3074330..3076348 + 672 28869946 - PSPTO_2760 - alpha-amylase family protein 2706 59.72 0 3076368..3079694 + 1108 28869947 - PSPTO_2761 - alpha-amylase family protein 2707 59.61 0 3079691..3081916 + 741 28869948 glgB PSPTO_2762 - glycogen branching enzyme 2708 61.67 0 3081957..3084740 - 927 28869949 - PSPTO_2763 - autotransporter, putative 2709 61.39 0 3084908..3086140 - 410 28869950 - PSPTO_2764 - hypothetical protein 2710 60.74 0 3086383..3087462 + 359 28869951 - PSPTO_2765 - hypothetical protein 2711 59.26 0 3087525..3089090 - 521 28869952 - PSPTO_2766 - ABC transporter, ATP-binding protein 2712 54.05 -1 3089486..3090349 - 287 28869953 - PSPTO_2767 - lipopolysaccharide core biosynthesis domain-containing protein 2713 50.28 -2 3090795..3090971 - 58 28869954 - PSPTO_2768 - hypothetical protein 2714 56.70 0 3091241..3091942 + 233 28869955 - PSPTO_2769 - putative lipoprotein 2715 59.26 0 3091981..3092088 - 35 28869956 - PSPTO_2770 - hypothetical protein 2716 61.02 0 3092048..3092578 + 176 28869957 - PSPTO_2771 - acetyltransferase 2717 54.93 0 3092691..3093116 + 141 28869958 - PSPTO_2772 - hypothetical protein 2718 53.60 -1 3093232..3093675 + 147 28869959 - PSPTO_2773 - hypothetical protein 2719 57.32 0 3093688..3094083 + 131 28869960 - PSPTO_2774 - hypothetical protein 2720 57.04 0 3094410..3095261 + 283 28869961 - PSPTO_2775 - amino acid ABC transporter, periplasmic amino acid-binding protein 2721 57.77 0 3095325..3095987 + 220 28869962 - PSPTO_2776 - amino acid ABC transporter, permease protein 2722 59.73 0 3095997..3096659 + 220 28869963 - PSPTO_2777 - amino acid ABC transporter, permease protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0