version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2529 56.33 0 2848873..2849433 + 186 28869770 - PSPTO_2579 - carbonic anhydrase-related protein 2530 58.78 0 2849485..2850651 + 388 28869771 - PSPTO_2580 - hypothetical protein 2531 59.37 0 2850700..2851329 - 209 28869772 - PSPTO_2581 - DNA-binding protein 2532 60.26 0 2853098..2854018 + 306 28869773 - PSPTO_2583 - glutamine amidotransferase, class-II protein 2533 60.96 0 2854015..2854698 + 227 28869774 - PSPTO_2584 - hypothetical protein 2534 62.94 +1 2854714..2856054 + 446 28869775 - PSPTO_2585 - glutamate synthase family protein 2535 61.39 0 2856588..2857913 + 441 28869776 amt-2 PSPTO_2586 - ammonium transporter 2536 52.03 -1 2857952..2858074 + 40 28869777 - PSPTO_2587 - hypothetical protein 2537 57.61 0 2858488..2859525 - 345 28869778 - PSPTO_2588 - luciferase family protein 2538 58.33 0 2859734..2860069 - 111 28869779 - PSPTO_2589 - hypothetical protein 2539 59.40 0 2860393..2861493 + 366 28869780 - PSPTO_2590 - luciferase family protein 2540 59.86 0 2861816..2863402 + 528 28869781 - PSPTO_2591 - GGDEF domain-containing protein 2541 61.77 0 2863432..2866575 - 1047 28869782 - PSPTO_2592 - AcrB/AcrD/AcrF family protein 2542 64.34 +1 2866609..2867769 - 386 28869783 - PSPTO_2593 - multidrug resistance protein AcrA/AcrE family 2543 60.72 0 2867950..2868504 + 184 28869784 nfxB PSPTO_2594 - transcriptional regulatory protein NfxB 2544 63.19 +1 2868541..2869950 - 469 28869785 pchA PSPTO_2595 - salicylate biosynthesis isochorismate synthase 2545 58.26 0 2869947..2870267 - 106 28869786 pchB PSPTO_2596 - isochorismate-pyruvate lyase 2546 65.71 +1 2870283..2871851 - 522 28869787 irp5 PSPTO_2597 - yersiniabactin synthetase, salycilate ligase component 2547 63.85 +1 2871864..2872679 - 271 28869788 irp4 PSPTO_2598 - yersiniabactin synthetase, thioesterase component 2548 65.65 +1 2872651..2873733 - 360 28869789 irp3 PSPTO_2599 - yersiniabactin synthetase, thiazolinyl reductase component 2549 64.32 +1 2873730..2883251 - 3173 28869790 irp1 PSPTO_2600 - yersiniabactin polyketide/non-ribosomal peptide synthetase 2550 63.49 +1 2883238..2884464 - 408 28869791 - PSPTO_2601 - hypothetical protein 2551 63.41 +1 2884461..2890634 - 2057 28869792 - PSPTO_2602 - yersiniabactin non-ribosomal peptide synthetase 2552 62.14 0 2890695..2892440 - 581 28869793 - PSPTO_2603 - ABC transporter, ATP-binding/permease protein 2553 62.51 0 2892437..2894218 - 593 28869794 - PSPTO_2604 - ABC transporter, ATP-binding/permease protein 2554 60.54 0 2894373..2896430 - 685 28869795 - PSPTO_2605 - TonB-dependent siderophore receptor, putative 2555 59.96 0 2896523..2897461 + 312 28869796 - PSPTO_2606 - AraC family transcriptional regulator 2556 63.23 +1 2897458..2899956 - 832 28869797 - PSPTO_2607 - TonB-dependent siderophore receptor, putative 2557 58.42 0 2900350..2900955 + 201 28869798 - PSPTO_2608 - Sco1/SenC family protein 2558 59.30 0 2900955..2901443 + 162 28869799 - PSPTO_2609 - hypothetical protein 2559 59.26 0 2901682..2902140 - 152 28869800 - PSPTO_2610 - phosphoesterase, putative 2560 58.25 0 2902216..2902797 - 193 28869801 - PSPTO_2611 - tRNA synthetase class II family protein 2561 59.52 0 2903125..2903628 - 167 28869802 - PSPTO_2612 - acetyltransferase 2562 54.69 0 2903711..2904286 - 191 28869803 - PSPTO_2613 - hypothetical protein 2563 57.74 0 2904461..2905300 + 279 28869804 - PSPTO_2614 - TauD/TfdA family dioxygenase 2564 54.22 -1 2905681..2906178 - 165 28869805 - PSPTO_2615 - GAF domain-containing protein 2565 58.20 0 2906392..2908293 + 633 28869806 - PSPTO_2616 - methyl-accepting chemotaxis protein 2566 64.13 +1 2908370..2909275 - 301 28869807 - PSPTO_2617 - LysR family transcriptional regulator 2567 62.68 0 2909379..2910581 + 400 28869808 argD-2 PSPTO_2618 - acetylornithine aminotransferase 2568 60.27 0 2910590..2911246 - 218 28869809 - PSPTO_2619 - hypothetical protein 2569 56.24 0 2911293..2911733 - 146 28869810 - PSPTO_2620 - CBS domain-containing protein 2570 61.21 0 2911958..2914321 + 787 28869811 polB PSPTO_2621 - DNA polymerase II 2571 62.06 0 2914318..2915163 - 281 28869812 - PSPTO_2622 - Sir2 family transcriptional regulator 2572 63.23 +1 2915330..2916172 + 280 28869813 - PSPTO_2623 - PhzF family phenazine biosynthesis protein 2573 60.83 0 2916314..2917153 - 279 28869814 - PSPTO_2624 - hypothetical protein 2574 63.92 +1 2918440..2919312 - 290 28869815 - PSPTO_2626 - LysR family transcriptional regulator 2575 59.31 0 2919555..2920397 + 280 28869816 - PSPTO_2627 - amino acid ABC transporter, periplasmic amino acid-binding protein 2576 58.64 0 2920441..2921175 + 244 28869817 - PSPTO_2628 - amino acid ABC transporter, permease protein 2577 60.20 0 2921165..2921953 + 262 28869818 - PSPTO_2629 - amino acid ABC transporter, permease protein 2578 61.41 0 2921940..2922776 + 278 28869819 - PSPTO_2630 - amino acid ABC transporter, ATP-binding protein 2579 59.43 0 2922804..2923397 + 197 28869820 - PSPTO_2631 - hypothetical protein 2580 63.52 +1 2923595..2926390 + 931 28869821 - PSPTO_2632 - fused rhodanese domain-containing protein/cystathionine beta-lyase 2581 64.67 +1 2926602..2927351 + 249 28869822 - PSPTO_2633 - cation ABC transporter, ATP-binding protein 2582 62.18 0 2927348..2928217 + 289 28869823 - PSPTO_2634 - cation ABC transporter, permease protein 2583 58.31 0 2928229..2929125 + 298 28869824 - PSPTO_2635 - cation ABC transporter, periplasmic cation-binding protein 2584 59.09 0 2929175..2930323 - 382 28869825 galM PSPTO_2636 - aldose 1-epimerase 2585 63.23 +1 2930623..2931495 + 290 28869826 - PSPTO_2637 - senescence marker protein-30 family protein 2586 57.00 0 2931657..2932670 + 337 28869827 abP PSPTO_2638 - L-arabinose ABC transporter, periplasmic L-arabinose-binding protein 2587 60.43 0 2932726..2934249 + 507 28869828 - PSPTO_2639 - L-arabinose transporter ATP-binding protein 2588 58.38 0 2934266..2935255 + 329 28869829 araH PSPTO_2640 - L-arabinose transporter permease protein 2589 62.04 0 2935266..2935373 + 35 28869830 - PSPTO_2641 - putative lipoprotein 2590 60.03 0 2935352..2936602 - 416 28869831 - PSPTO_2642 - sensor histidine kinase 2591 60.26 0 2936674..2937375 - 233 28869832 - PSPTO_2643 - DNA-binding response regulator 2592 58.21 0 2937426..2938205 - 259 28869833 - PSPTO_2644 - MltA-interacting protein 2593 61.82 0 2938265..2939854 - 529 28869834 - PSPTO_2645 - hypothetical protein 2594 61.74 0 2940161..2940871 + 236 28869835 - PSPTO_2646 - TetR family transcriptional regulator 2595 56.95 0 2940935..2941675 + 246 28869836 - PSPTO_2647 - hypothetical protein 2596 56.84 0 2941675..2942142 + 155 28869837 - PSPTO_2648 - hypothetical protein 2597 61.27 0 2942151..2943113 + 320 28869838 - PSPTO_2649 - hypothetical protein 2598 56.79 0 2943186..2943347 + 53 28869839 - PSPTO_2650 - hypothetical protein 2599 59.52 0 2943337..2943714 - 125 28869840 - PSPTO_2651 - response regulator 2600 59.39 0 2943711..2946692 - 993 28869841 - PSPTO_2652 - bacteriophytochrome, putative 2601 60.62 0 2949573..2950250 + 225 28869842 - PSPTO_2654 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2602 63.92 +1 2950250..2951233 + 327 28869843 - PSPTO_2655 - oxidoreductase, molybdopterin-binding subunit, putative 2603 62.60 0 2951420..2953459 + 679 28869844 - PSPTO_2656 - aldehyde oxidase and xanthine dehydrogenase family protein 2604 64.60 +1 2953462..2954430 + 322 28869845 - PSPTO_2657 - xanthine dehydrogenase accessory factor XdhC, putative 2605 63.47 +1 2954411..2955004 - 197 28869846 - PSPTO_2658 - hypothetical protein 2606 57.78 0 2955177..2955761 + 194 28869847 - PSPTO_2659 - NAD(P)H-flavin oxidoreductase 2607 60.63 0 2956044..2957435 - 463 28869848 - PSPTO_2660 - aldehyde dehydrogenase family protein 2608 62.57 0 2957538..2958416 + 292 28869849 - PSPTO_2661 - LysR family transcriptional regulator 2609 61.74 0 2958422..2959516 - 364 28869850 - PSPTO_2662 - tartrate dehydrogenase 2610 61.59 0 2959629..2960534 + 301 28869851 - PSPTO_2663 - LysR family transcriptional regulator 2611 61.04 0 2960581..2961735 - 384 28869852 - PSPTO_2664 - spermidine/putrescine ABC transporter, ATP-binding protein 2612 61.03 0 2961732..2962547 - 271 28869853 - PSPTO_2665 - spermidine/putrescine ABC transporter, permease protein, putative 2613 61.17 0 2962554..2963408 - 284 28869854 - PSPTO_2666 - spermidine/putrescine ABC transporter, permease protein, putative 2614 60.53 0 2963495..2964520 - 341 28869855 - PSPTO_2667 - spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative 2615 62.88 +1 2964810..2965919 - 369 28869856 ribBA-2 PSPTO_2668 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 2616 58.08 0 2966014..2966304 + 96 28869857 - PSPTO_2669 - hypothetical protein 2617 59.93 0 2966404..2966967 - 187 28869858 - PSPTO_2670 - mutT/nudix family protein 2618 61.49 0 2966969..2967721 - 250 28869859 - PSPTO_2671 - GntR family transcriptional regulator 2619 59.47 0 2967912..2968397 - 161 28869860 - PSPTO_2672 - NAD(P)H-flavin oxidoreductase 2620 63.36 +1 2968411..2969892 - 493 28869861 - PSPTO_2673 - aldehyde dehydrogenase family protein 2621 63.37 +1 2969889..2970737 - 282 28869862 - PSPTO_2674 - 3-oxoadipate enol-lactone hydrolase family protein 2622 57.87 0 2970772..2971362 - 196 28869863 - PSPTO_2675 - hypothetical protein 2623 60.44 0 2971649..2972788 + 379 28869864 fdhA-2 PSPTO_2676 - glutathione-independent formaldehyde dehydrogenase 2624 59.81 0 2972883..2973743 + 286 28869865 - PSPTO_2677 - short chain dehydrogenase/reductase family oxidoreductase 2625 59.59 0 2973945..2974919 + 324 28869866 hopP1 PSPTO_2678 - type III helper protein HopP1 2626 60.16 0 2974894..2975016 + 40 28869867 - PSPTO_2679 - hypothetical protein 2627 61.71 0 2975356..2976786 + 476 28869868 gabD-3 PSPTO_2680 - succinate-semialdehyde dehydrogenase 2628 56.73 0 2976862..2977797 - 311 28869869 pbpG PSPTO_2681 - D-alanyl-D-alanine endopeptidase 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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