version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2499 56.80 0 2815564..2817093 + 509 28869740 - PSPTO_2549 - sigma-54 dependent transcriptional regulator 2500 52.48 -1 2817143..2817283 + 46 28869741 - PSPTO_2550 - hypothetical protein 2501 53.86 -1 2817337..2817828 + 163 28869742 - PSPTO_2551 - hypothetical protein 2502 56.58 0 2817858..2819156 + 432 28869743 - PSPTO_2552 - hypothetical protein 2503 55.67 0 2819156..2820028 + 290 28869744 - PSPTO_2553 - hypothetical protein 2504 57.66 0 2820042..2823548 + 1168 28869745 - PSPTO_2554 - hypothetical protein 2505 60.91 0 2823826..2824659 + 277 28869746 phnC PSPTO_2555 - phosphonates ABC transporter, ATP-binding protein 2506 56.78 0 2824697..2825707 + 336 28869747 phnD PSPTO_2556 - phosphonates ABC transporter, periplasmic phosphonates-binding protein 2507 60.71 0 2825735..2826523 + 262 28869748 phnE PSPTO_2557 - phosphonates ABC transporter, permease protein 2508 63.61 +1 2826562..2827281 + 239 28869749 phnF PSPTO_2558 - transcriptional regulator PhnF 2509 64.73 +1 2827296..2827760 + 154 28869750 phnG PSPTO_2559 - phosphonate metabolism protein PhnG 2510 62.81 +1 2827760..2828356 + 198 28869751 phnH PSPTO_2560 - carbon-phosphorus lyase complex subunit 2511 63.33 +1 2828356..2829435 + 359 28869752 phnI PSPTO_2561 - phosphonate metabolism protein PhnI 2512 60.02 0 2829432..2830319 + 295 28869753 phnJ PSPTO_2562 - phosphonate metabolism protein PhnJ 2513 62.90 +1 2830316..2831137 + 273 28869754 - PSPTO_2563 - phosphonates transport ATP-binding protein 2514 64.30 +1 2831170..2831886 + 238 28869755 - PSPTO_2564 - phosphonate ABC transporter, ATP-binding protein 2515 61.08 0 2831880..2833025 + 381 28869756 - PSPTO_2565 - phosphonate metabolism protein PhnM 2516 59.96 0 2833025..2833591 + 188 28869757 phnN PSPTO_2566 - ATP-binding protein PhnN 2517 65.20 +1 2833582..2834331 + 249 28869758 - PSPTO_2567 - carbon-phosphorus lyase complex accessory protein 2518 63.08 +1 2834486..2836852 + 788 28869759 gcd-1 PSPTO_2568 - glucose dehydrogenase 2519 63.52 +1 2836915..2838438 - 507 28869760 - PSPTO_2569 - amidase family protein 2520 63.37 +1 2838609..2839760 - 383 28869761 - PSPTO_2570 - M20/M25/M40 family peptidase 2521 64.01 +1 2839757..2841184 - 475 28869762 - PSPTO_2571 - hypothetical protein 2522 62.13 0 2841181..2842194 - 337 28869763 - PSPTO_2572 - peptide ABC transporter, ATP-binding protein 2523 63.57 +1 2842191..2843192 - 333 28869764 - PSPTO_2573 - peptide ABC transporter, ATP-binding protein 2524 62.82 +1 2843209..2844117 - 302 28869765 - PSPTO_2574 - peptide ABC transporter, permease protein 2525 62.20 0 2844126..2845043 - 305 28869766 - PSPTO_2575 - peptide ABC transporter, permease protein 2526 60.68 0 2845146..2846666 - 506 28869767 - PSPTO_2576 - peptide ABC transporter, periplasmic peptide-binding protein 2527 61.86 0 2846878..2847771 + 297 28869768 - PSPTO_2577 - LysR family transcriptional regulator 2528 64.24 +1 2847956..2848861 + 301 28869769 - PSPTO_2578 - putative GTP cyclohydrolase 2529 56.33 0 2848873..2849433 + 186 28869770 - PSPTO_2579 - carbonic anhydrase-related protein 2530 58.78 0 2849485..2850651 + 388 28869771 - PSPTO_2580 - hypothetical protein 2531 59.37 0 2850700..2851329 - 209 28869772 - PSPTO_2581 - DNA-binding protein 2532 60.26 0 2853098..2854018 + 306 28869773 - PSPTO_2583 - glutamine amidotransferase, class-II protein 2533 60.96 0 2854015..2854698 + 227 28869774 - PSPTO_2584 - hypothetical protein 2534 62.94 +1 2854714..2856054 + 446 28869775 - PSPTO_2585 - glutamate synthase family protein 2535 61.39 0 2856588..2857913 + 441 28869776 amt-2 PSPTO_2586 - ammonium transporter 2536 52.03 -1 2857952..2858074 + 40 28869777 - PSPTO_2587 - hypothetical protein 2537 57.61 0 2858488..2859525 - 345 28869778 - PSPTO_2588 - luciferase family protein 2538 58.33 0 2859734..2860069 - 111 28869779 - PSPTO_2589 - hypothetical protein 2539 59.40 0 2860393..2861493 + 366 28869780 - PSPTO_2590 - luciferase family protein 2540 59.86 0 2861816..2863402 + 528 28869781 - PSPTO_2591 - GGDEF domain-containing protein 2541 61.77 0 2863432..2866575 - 1047 28869782 - PSPTO_2592 - AcrB/AcrD/AcrF family protein 2542 64.34 +1 2866609..2867769 - 386 28869783 - PSPTO_2593 - multidrug resistance protein AcrA/AcrE family 2543 60.72 0 2867950..2868504 + 184 28869784 nfxB PSPTO_2594 - transcriptional regulatory protein NfxB 2544 63.19 +1 2868541..2869950 - 469 28869785 pchA PSPTO_2595 - salicylate biosynthesis isochorismate synthase 2545 58.26 0 2869947..2870267 - 106 28869786 pchB PSPTO_2596 - isochorismate-pyruvate lyase 2546 65.71 +1 2870283..2871851 - 522 28869787 irp5 PSPTO_2597 - yersiniabactin synthetase, salycilate ligase component 2547 63.85 +1 2871864..2872679 - 271 28869788 irp4 PSPTO_2598 - yersiniabactin synthetase, thioesterase component 2548 65.65 +1 2872651..2873733 - 360 28869789 irp3 PSPTO_2599 - yersiniabactin synthetase, thiazolinyl reductase component 2549 64.32 +1 2873730..2883251 - 3173 28869790 irp1 PSPTO_2600 - yersiniabactin polyketide/non-ribosomal peptide synthetase 2550 63.49 +1 2883238..2884464 - 408 28869791 - PSPTO_2601 - hypothetical protein 2551 63.41 +1 2884461..2890634 - 2057 28869792 - PSPTO_2602 - yersiniabactin non-ribosomal peptide synthetase 2552 62.14 0 2890695..2892440 - 581 28869793 - PSPTO_2603 - ABC transporter, ATP-binding/permease protein 2553 62.51 0 2892437..2894218 - 593 28869794 - PSPTO_2604 - ABC transporter, ATP-binding/permease protein 2554 60.54 0 2894373..2896430 - 685 28869795 - PSPTO_2605 - TonB-dependent siderophore receptor, putative 2555 59.96 0 2896523..2897461 + 312 28869796 - PSPTO_2606 - AraC family transcriptional regulator 2556 63.23 +1 2897458..2899956 - 832 28869797 - PSPTO_2607 - TonB-dependent siderophore receptor, putative 2557 58.42 0 2900350..2900955 + 201 28869798 - PSPTO_2608 - Sco1/SenC family protein 2558 59.30 0 2900955..2901443 + 162 28869799 - PSPTO_2609 - hypothetical protein 2559 59.26 0 2901682..2902140 - 152 28869800 - PSPTO_2610 - phosphoesterase, putative 2560 58.25 0 2902216..2902797 - 193 28869801 - PSPTO_2611 - tRNA synthetase class II family protein 2561 59.52 0 2903125..2903628 - 167 28869802 - PSPTO_2612 - acetyltransferase 2562 54.69 0 2903711..2904286 - 191 28869803 - PSPTO_2613 - hypothetical protein 2563 57.74 0 2904461..2905300 + 279 28869804 - PSPTO_2614 - TauD/TfdA family dioxygenase 2564 54.22 -1 2905681..2906178 - 165 28869805 - PSPTO_2615 - GAF domain-containing protein 2565 58.20 0 2906392..2908293 + 633 28869806 - PSPTO_2616 - methyl-accepting chemotaxis protein 2566 64.13 +1 2908370..2909275 - 301 28869807 - PSPTO_2617 - LysR family transcriptional regulator 2567 62.68 0 2909379..2910581 + 400 28869808 argD-2 PSPTO_2618 - acetylornithine aminotransferase 2568 60.27 0 2910590..2911246 - 218 28869809 - PSPTO_2619 - hypothetical protein 2569 56.24 0 2911293..2911733 - 146 28869810 - PSPTO_2620 - CBS domain-containing protein 2570 61.21 0 2911958..2914321 + 787 28869811 polB PSPTO_2621 - DNA polymerase II 2571 62.06 0 2914318..2915163 - 281 28869812 - PSPTO_2622 - Sir2 family transcriptional regulator 2572 63.23 +1 2915330..2916172 + 280 28869813 - PSPTO_2623 - PhzF family phenazine biosynthesis protein 2573 60.83 0 2916314..2917153 - 279 28869814 - PSPTO_2624 - hypothetical protein 2574 63.92 +1 2918440..2919312 - 290 28869815 - PSPTO_2626 - LysR family transcriptional regulator 2575 59.31 0 2919555..2920397 + 280 28869816 - PSPTO_2627 - amino acid ABC transporter, periplasmic amino acid-binding protein 2576 58.64 0 2920441..2921175 + 244 28869817 - PSPTO_2628 - amino acid ABC transporter, permease protein 2577 60.20 0 2921165..2921953 + 262 28869818 - PSPTO_2629 - amino acid ABC transporter, permease protein 2578 61.41 0 2921940..2922776 + 278 28869819 - PSPTO_2630 - amino acid ABC transporter, ATP-binding protein 2579 59.43 0 2922804..2923397 + 197 28869820 - PSPTO_2631 - hypothetical protein 2580 63.52 +1 2923595..2926390 + 931 28869821 - PSPTO_2632 - fused rhodanese domain-containing protein/cystathionine beta-lyase 2581 64.67 +1 2926602..2927351 + 249 28869822 - PSPTO_2633 - cation ABC transporter, ATP-binding protein 2582 62.18 0 2927348..2928217 + 289 28869823 - PSPTO_2634 - cation ABC transporter, permease protein 2583 58.31 0 2928229..2929125 + 298 28869824 - PSPTO_2635 - cation ABC transporter, periplasmic cation-binding protein 2584 59.09 0 2929175..2930323 - 382 28869825 galM PSPTO_2636 - aldose 1-epimerase 2585 63.23 +1 2930623..2931495 + 290 28869826 - PSPTO_2637 - senescence marker protein-30 family protein 2586 57.00 0 2931657..2932670 + 337 28869827 abP PSPTO_2638 - L-arabinose ABC transporter, periplasmic L-arabinose-binding protein 2587 60.43 0 2932726..2934249 + 507 28869828 - PSPTO_2639 - L-arabinose transporter ATP-binding protein 2588 58.38 0 2934266..2935255 + 329 28869829 araH PSPTO_2640 - L-arabinose transporter permease protein 2589 62.04 0 2935266..2935373 + 35 28869830 - PSPTO_2641 - putative lipoprotein 2590 60.03 0 2935352..2936602 - 416 28869831 - PSPTO_2642 - sensor histidine kinase 2591 60.26 0 2936674..2937375 - 233 28869832 - PSPTO_2643 - DNA-binding response regulator 2592 58.21 0 2937426..2938205 - 259 28869833 - PSPTO_2644 - MltA-interacting protein 2593 61.82 0 2938265..2939854 - 529 28869834 - PSPTO_2645 - hypothetical protein 2594 61.74 0 2940161..2940871 + 236 28869835 - PSPTO_2646 - TetR family transcriptional regulator 2595 56.95 0 2940935..2941675 + 246 28869836 - PSPTO_2647 - hypothetical protein 2596 56.84 0 2941675..2942142 + 155 28869837 - PSPTO_2648 - hypothetical protein 2597 61.27 0 2942151..2943113 + 320 28869838 - PSPTO_2649 - hypothetical protein 2598 56.79 0 2943186..2943347 + 53 28869839 - PSPTO_2650 - hypothetical protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0