version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2430 64.20 +1 2736166..2738154 - 662 28869671 topB PSPTO_2478 - DNA topoisomerase III 2431 60.39 0 2738331..2739158 - 275 28869672 - PSPTO_2479 - hypothetical protein 2432 58.47 0 2739439..2741328 + 629 28869673 - PSPTO_2480 - methyl-accepting chemotaxis protein 2433 66.42 +1 2741606..2742427 + 273 28869674 tonB-2 PSPTO_2481 - tonB protein 2434 62.00 0 2742562..2743290 + 242 28869675 exbB-3 PSPTO_2482 - TonB system transport protein ExbB 2435 58.06 0 2743322..2743693 + 123 28869676 exbD-3 PSPTO_2483 - TonB system transport protein ExbD 2436 59.93 0 2743976..2746378 + 800 28869677 - PSPTO_2484 - TonB-dependent siderophore receptor, putative 2437 53.18 -1 2746748..2747770 + 340 28869678 - PSPTO_2485 - ISPsy7, transposase 2438 58.09 0 2748125..2749162 - 345 28869679 - PSPTO_2486 - ABC transporter, periplasmic substrate-binding protein, putative 2439 61.64 0 2749395..2750210 + 271 28869680 - PSPTO_2487 - hypothetical protein 2440 59.52 0 2750281..2751189 + 302 28869681 - PSPTO_2488 - glutaminase 2441 62.86 +1 2751293..2752369 + 358 28869682 - PSPTO_2489 - hypothetical protein 2442 61.98 0 2752511..2754322 + 603 28869683 - PSPTO_2490 - ABC transporter, ATP-binding/permease protein 2443 59.44 0 2754410..2755447 + 345 28869684 - PSPTO_2491 - aldo/keto reductase family oxidoreductase 2444 61.80 0 2755531..2756331 + 266 28869685 - PSPTO_2492 - short chain dehydrogenase/reductase family oxidoreductase 2445 60.86 0 2756324..2758150 + 608 28869686 - PSPTO_2493 - glycosy hydrolase family protein 2446 62.27 0 2758195..2759103 - 302 28869687 - PSPTO_2494 - LysR family transcriptional regulator 2447 59.18 0 2759406..2760287 + 293 28869688 - PSPTO_2495 - alpha/beta fold family hydrolase 2448 59.34 0 2760925..2762343 - 472 28869689 - PSPTO_2496 - major facilitator family transporter 2449 49.21 -2 2762532..2762657 - 41 28869690 - PSPTO_2497 - hypothetical protein 2450 65.04 +1 2762711..2762833 - 40 28869691 - PSPTO_2498 - hypothetical protein 2451 61.80 0 2762823..2764055 + 410 28869692 mntH PSPTO_2499 - manganese transport protein MntH 2452 62.81 +1 2764117..2765568 + 483 28869693 - PSPTO_2500 - major facilitator family transporter 2453 57.78 0 2765573..2765842 - 89 28869694 - PSPTO_2501 - hypothetical protein 2454 59.80 0 2765910..2766113 - 67 28869695 - PSPTO_2502 - hypothetical protein 2455 58.60 0 2766177..2766746 - 189 28869696 - PSPTO_2503 - hypothetical protein 2456 61.55 0 2766894..2767460 + 188 28869697 - PSPTO_2504 - amino acid transporter LysE 2457 58.51 0 2767470..2768303 - 277 28869698 - PSPTO_2505 - AraC family transcriptional regulator 2458 55.02 0 2768415..2768723 - 102 28869699 - PSPTO_2506 - putative lipoprotein 2459 62.47 0 2768816..2769673 - 285 28869700 - PSPTO_2507 - hypothetical protein 2460 61.31 0 2769761..2770189 + 142 28869701 - PSPTO_2508 - hypothetical protein 2461 61.06 0 2770328..2772217 + 629 28869702 - PSPTO_2509 - penicillin-binding protein 2462 61.66 0 2772382..2774100 + 572 28869703 poxB PSPTO_2510 - pyruvate dehydrogenase 2463 58.87 0 2774360..2776321 + 653 28869704 - PSPTO_2511 - methyl-accepting chemotaxis protein 2464 53.07 -1 2776943..2777464 - 173 28869705 - PSPTO_2512 - hypothetical protein 2465 53.70 -1 2777452..2777559 + 35 28869706 - PSPTO_2513 - hypothetical protein 2466 59.54 0 2777569..2778087 + 172 28869707 - PSPTO_2514 - hypothetical protein 2467 58.80 0 2778105..2778638 + 177 28869708 - PSPTO_2515 - putative lipoprotein 2468 61.36 0 2778665..2779663 - 332 28869709 moaA PSPTO_2516 - molybdenum cofactor biosynthesis protein A 2469 61.93 0 2779927..2781276 - 449 28869710 - PSPTO_2517 - sodium/hydrogen exchanger family protein 2470 61.06 0 2781389..2782441 - 350 28869711 - PSPTO_2518 - extracellular solute-binding domain-containing protein 2471 64.89 +1 2782438..2783622 - 394 28869712 - PSPTO_2519 - oxidoreductase, FAD-binding 2472 64.73 +1 2783619..2785010 - 463 28869713 - PSPTO_2520 - pyridine nucleotide-disulphide oxidoreductase family protein 2473 65.98 +1 2785007..2785297 - 96 28869714 - PSPTO_2521 - hypothetical protein 2474 61.38 0 2785312..2786106 - 264 28869715 - PSPTO_2522 - ABC transporter, permease protein 2475 60.14 0 2786110..2786982 - 290 28869716 - PSPTO_2523 - ABC transporter, permease protein 2476 62.20 0 2786979..2788007 - 342 28869717 - PSPTO_2524 - ABC transporter, ATP-binding protein 2477 63.45 +1 2788249..2789088 + 279 28869718 - PSPTO_2525 - IclR family transcriptional regulator 2478 60.30 0 2789232..2790911 + 559 28869719 - PSPTO_2526 - methyl-accepting chemotaxis protein 2479 60.64 0 2790980..2791942 - 320 28869720 - PSPTO_2527 - hypothetical protein 2480 64.29 +1 2792008..2792637 - 209 28869721 - PSPTO_2528 - hypothetical protein 2481 56.73 0 2793112..2793453 - 113 28869722 - PSPTO_2529 - peptidyl-prolyl cis-trans isomerase, FKBP-type 2482 54.26 -1 2793450..2793578 - 42 28869723 - PSPTO_2530 - hypothetical protein 2483 56.84 0 2793591..2793875 - 94 28869724 - PSPTO_2531 - hypothetical protein 2484 58.38 0 2794541..2796109 + 522 28869725 - PSPTO_2532 - TerC family membrane protein 2485 59.20 0 2796179..2796754 - 191 28869726 - PSPTO_2533 - acetyltransferase 2486 49.49 -2 2796816..2797496 - 226 28869727 - PSPTO_2534 - hypothetical protein 2487 56.26 0 2797493..2800933 - 1146 28869728 - PSPTO_2535 - hypothetical protein 2488 55.63 0 2800881..2801324 - 147 28869729 - PSPTO_2536 - hypothetical protein 2489 52.14 -1 2801296..2801763 - 155 28869730 - PSPTO_2537 - hypothetical protein 2490 57.81 0 2801756..2803798 - 680 28869731 - PSPTO_2538 - Rhs element Vgr protein 2491 46.90 -2 2803874..2804389 - 171 28869732 hcp-1 PSPTO_2539 - secreted protein Hcp 2492 54.19 -1 2806011..2806988 - 325 28869733 - PSPTO_2541 - ISPssy, transposase 2493 49.70 -2 2807665..2808165 + 166 28869734 - PSPTO_2543 - hypothetical protein 2494 51.96 -1 2808195..2809670 + 491 28869735 - PSPTO_2544 - hypothetical protein 2495 50.00 -2 2809686..2810093 + 135 28869736 - PSPTO_2545 - hypothetical protein 2496 53.97 -1 2810191..2811978 + 595 28869737 - PSPTO_2546 - hypothetical protein 2497 54.56 0 2811942..2812949 + 335 28869738 - PSPTO_2547 - hypothetical protein 2498 57.26 0 2812959..2815562 + 867 28869739 - PSPTO_2548 - clpB protein, putative 2499 56.80 0 2815564..2817093 + 509 28869740 - PSPTO_2549 - sigma-54 dependent transcriptional regulator 2500 52.48 -1 2817143..2817283 + 46 28869741 - PSPTO_2550 - hypothetical protein 2501 53.86 -1 2817337..2817828 + 163 28869742 - PSPTO_2551 - hypothetical protein 2502 56.58 0 2817858..2819156 + 432 28869743 - PSPTO_2552 - hypothetical protein 2503 55.67 0 2819156..2820028 + 290 28869744 - PSPTO_2553 - hypothetical protein 2504 57.66 0 2820042..2823548 + 1168 28869745 - PSPTO_2554 - hypothetical protein 2505 60.91 0 2823826..2824659 + 277 28869746 phnC PSPTO_2555 - phosphonates ABC transporter, ATP-binding protein 2506 56.78 0 2824697..2825707 + 336 28869747 phnD PSPTO_2556 - phosphonates ABC transporter, periplasmic phosphonates-binding protein 2507 60.71 0 2825735..2826523 + 262 28869748 phnE PSPTO_2557 - phosphonates ABC transporter, permease protein 2508 63.61 +1 2826562..2827281 + 239 28869749 phnF PSPTO_2558 - transcriptional regulator PhnF 2509 64.73 +1 2827296..2827760 + 154 28869750 phnG PSPTO_2559 - phosphonate metabolism protein PhnG 2510 62.81 +1 2827760..2828356 + 198 28869751 phnH PSPTO_2560 - carbon-phosphorus lyase complex subunit 2511 63.33 +1 2828356..2829435 + 359 28869752 phnI PSPTO_2561 - phosphonate metabolism protein PhnI 2512 60.02 0 2829432..2830319 + 295 28869753 phnJ PSPTO_2562 - phosphonate metabolism protein PhnJ 2513 62.90 +1 2830316..2831137 + 273 28869754 - PSPTO_2563 - phosphonates transport ATP-binding protein 2514 64.30 +1 2831170..2831886 + 238 28869755 - PSPTO_2564 - phosphonate ABC transporter, ATP-binding protein 2515 61.08 0 2831880..2833025 + 381 28869756 - PSPTO_2565 - phosphonate metabolism protein PhnM 2516 59.96 0 2833025..2833591 + 188 28869757 phnN PSPTO_2566 - ATP-binding protein PhnN 2517 65.20 +1 2833582..2834331 + 249 28869758 - PSPTO_2567 - carbon-phosphorus lyase complex accessory protein 2518 63.08 +1 2834486..2836852 + 788 28869759 gcd-1 PSPTO_2568 - glucose dehydrogenase 2519 63.52 +1 2836915..2838438 - 507 28869760 - PSPTO_2569 - amidase family protein 2520 63.37 +1 2838609..2839760 - 383 28869761 - PSPTO_2570 - M20/M25/M40 family peptidase 2521 64.01 +1 2839757..2841184 - 475 28869762 - PSPTO_2571 - hypothetical protein 2522 62.13 0 2841181..2842194 - 337 28869763 - PSPTO_2572 - peptide ABC transporter, ATP-binding protein 2523 63.57 +1 2842191..2843192 - 333 28869764 - PSPTO_2573 - peptide ABC transporter, ATP-binding protein 2524 62.82 +1 2843209..2844117 - 302 28869765 - PSPTO_2574 - peptide ABC transporter, permease protein 2525 62.20 0 2844126..2845043 - 305 28869766 - PSPTO_2575 - peptide ABC transporter, permease protein 2526 60.68 0 2845146..2846666 - 506 28869767 - PSPTO_2576 - peptide ABC transporter, periplasmic peptide-binding protein 2527 61.86 0 2846878..2847771 + 297 28869768 - PSPTO_2577 - LysR family transcriptional regulator 2528 64.24 +1 2847956..2848861 + 301 28869769 - PSPTO_2578 - putative GTP cyclohydrolase 2529 56.33 0 2848873..2849433 + 186 28869770 - PSPTO_2579 - carbonic anhydrase-related protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0