version 1.0
Pseudomonas syringae pv. tomato str. DC3000, complete genome - 1..6397126 5475 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1141 57.26 0 1287005..1287493 + 162 28868385 - PSPTO_1172 - glutathione peroxidase family protein 1142 60.51 0 1287676..1288779 + 367 28868386 - PSPTO_1173 - oxidoreductase, FAD/FMN-binding 1143 61.30 0 1288748..1289959 - 403 28868387 - PSPTO_1174 - glycosyl transferase, group 1 family protein 1144 51.93 -1 1290659..1291255 + 198 28868388 - PSPTO_1175 - hypothetical protein 1145 51.59 -1 1291353..1291697 - 114 28868389 - PSPTO_1176 - hypothetical protein 1146 59.84 0 1291883..1292644 - 253 28868390 cysZ PSPTO_1177 - putative sulfate transport protein CysZ 1147 60.33 0 1293002..1293964 + 320 28868391 trxB PSPTO_1178 - thioredoxin reductase 1148 58.48 0 1294195..1294536 - 113 28868392 hopJ1 PSPTO_1179 - type III effector HopJ1 1149 57.24 0 1294529..1294825 - 98 28868393 - PSPTO_1180 - hypothetical protein 1150 57.26 0 1294869..1295240 - 123 28868394 folB-2 PSPTO_1181 - D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 1151 54.79 0 1295240..1295803 - 187 28868395 folE-1 PSPTO_1182 - GTP cyclohydrolase I 1152 60.06 0 1295825..1296535 - 236 28868396 - PSPTO_1183 - short chain dehydrogenase 1153 62.30 0 1296770..1297342 - 190 28868397 - PSPTO_1184 - hypothetical protein 1154 55.94 0 1297494..1298099 - 201 28868398 - PSPTO_1185 - hypothetical protein 1155 62.03 0 1298287..1298739 + 150 28868399 - PSPTO_1186 - flavodoxin 1156 61.45 0 1298852..1299772 + 306 28868400 - PSPTO_1187 - short chain dehydrogenase/reductase family oxidoreductase 1157 54.19 -1 1299927..1300904 + 325 28868401 - PSPTO_1188 - ISPssy, transposase 1158 56.31 0 1301655..1303208 - 517 28868402 - PSPTO_1189 - ISPsy5, transposase 1159 48.33 -2 1303226..1303585 - 119 28868403 - PSPTO_1190 - ISPsy5, Orf1 1160 62.31 0 1303986..1304789 - 267 28868404 - PSPTO_1191 - hypothetical protein 1161 62.63 0 1304872..1305615 - 247 28868405 - PSPTO_1192 - hypothetical protein 1162 62.80 +1 1305776..1307740 - 654 28868406 - PSPTO_1193 - hypothetical protein 1163 60.25 0 1307737..1309857 - 706 28868407 nfrB PSPTO_1194 - bacteriophage N4 adsorption protein B 1164 63.63 +1 1309870..1312011 - 713 28868408 - PSPTO_1195 - hypothetical protein 1165 60.75 0 1312251..1313501 - 416 28868409 - PSPTO_1196 - UDP-N-acetylglucosamine 2-epimerase 1166 56.93 0 1314205..1314471 - 88 28868410 - PSPTO_1197 - hypothetical protein 1167 56.91 0 1314528..1314650 - 40 28868411 - PSPTO_1198 - hypothetical protein 1168 45.65 -2 1314638..1314775 - 45 28868412 - PSPTO_1199 - hypothetical protein 1169 57.06 0 1314899..1315387 + 162 28868413 - PSPTO_1200 - hypothetical protein 1170 62.16 0 1315456..1315788 - 110 28868414 - PSPTO_1201 - putative lipoprotein 1171 58.56 0 1316033..1316365 - 110 28868415 - PSPTO_1202 - hypothetical protein 1172 58.75 0 1316530..1317072 + 180 28868416 - PSPTO_1203 - RNA polymerase sigma-70 family protein 1173 62.31 0 1317069..1318031 + 320 28868417 - PSPTO_1204 - regulatory protein, putative 1174 55.71 0 1318123..1318551 - 142 28868418 - PSPTO_1205 - ribosomal subunit interface protein, putative 1175 60.75 0 1318800..1321301 + 833 28868419 - PSPTO_1206 - TonB-dependent siderophore receptor, putative 1176 60.96 0 1321452..1323800 - 782 28868420 - PSPTO_1207 - iron(III) dicitrate transport protein fecA 1177 65.64 +1 1324328..1325305 - 325 28868421 - PSPTO_1208 - regulatory protein, putative 1178 62.52 0 1325302..1325808 - 168 28868422 - PSPTO_1209 - RNA polymerase sigma factor 1179 63.77 +1 1326007..1326351 + 114 28868423 - PSPTO_1210 - hypothetical protein 1180 60.86 0 1326348..1327913 + 521 28868424 - PSPTO_1211 - hypothetical protein 1181 62.46 0 1327913..1328245 + 110 28868425 - PSPTO_1212 - hypothetical protein 1182 62.90 +1 1328234..1329109 - 291 28868426 - PSPTO_1213 - AraC family transcriptional regulator 1183 60.47 0 1329246..1330148 + 300 28868427 - PSPTO_1214 - membrane protein 1184 60.92 0 1330200..1331174 - 324 28868428 - PSPTO_1215 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1185 63.08 +1 1331262..1332209 - 315 28868429 - PSPTO_1216 - LysR family transcriptional regulator 1186 63.99 +1 1332394..1333890 + 498 28868430 - PSPTO_1217 - outer membrane efflux protein 1187 62.41 0 1333887..1336073 + 728 28868431 - PSPTO_1218 - fusaric acid resistance protein, putative 1188 56.72 0 1336058..1336258 + 66 28868432 - PSPTO_1219 - hypothetical protein 1189 60.63 0 1336284..1337144 + 286 28868433 - PSPTO_1220 - fusaric acid resistance protein, putative 1190 45.87 -2 1338122..1338751 + 209 28868434 - PSPTO_1221 - amino acid transporter LysE 1191 60.00 0 1340118..1340312 + 64 28868435 - PSPTO_1222 - hypothetical protein 1192 62.27 0 1340384..1341202 - 272 28868436 - PSPTO_1223 - short chain dehydrogenase 1193 61.51 0 1341219..1341683 - 154 28868437 - PSPTO_1224 - hypothetical protein 1194 48.33 -2 1343596..1343955 + 119 28868438 - PSPTO_1226 - ISPsy5, Orf1 1195 56.31 0 1343973..1345526 + 517 28868439 - PSPTO_1227 - ISPsy5, transposase 1196 54.19 -1 1346595..1347572 + 325 28868440 - PSPTO_1229 - ISPssy, transposase 1197 55.86 0 1347973..1348083 - 36 28868441 - PSPTO_1230 - hypothetical protein 1198 55.33 0 1348208..1350976 + 922 28868442 - PSPTO_1231 - insecticidal toxin protein, putative 1199 59.71 0 1351082..1352533 - 483 28868443 algA PSPTO_1232 - alginate biosynthesis protein AlgA 1200 60.09 0 1352670..1353338 - 222 28868444 algF PSPTO_1233 - alginate biosynthesis protein AlgF 1201 61.22 0 1353351..1354526 - 391 28868445 algJ PSPTO_1234 - alginate biosynthesis protein AlgJ 1202 59.99 0 1354537..1356093 - 518 28868446 algI PSPTO_1235 - alginate biosynthesis protein AlgI 1203 57.70 0 1356280..1357416 - 378 28868447 algL PSPTO_1236 - poly(beta-D-mannuronate) lyase 1204 59.17 0 1357425..1358864 - 479 28868448 algX PSPTO_1237 - alginate biosynthesis protein AlgX 1205 58.04 0 1358879..1360489 - 536 28868449 algG PSPTO_1238 - alginate biosynthesis protein AlgG 1206 62.01 0 1360516..1361997 - 493 28868450 algE PSPTO_1239 - alginate biosynthesis protein AlgE 1207 61.50 0 1361994..1363406 - 470 28868451 algK PSPTO_1240 - alginate biosynthesis protein AlgK 1208 60.36 0 1363409..1364581 - 390 28868452 - PSPTO_1241 - alginate biosynthesis protein Alg44 1209 58.77 0 1364622..1366103 - 493 28868453 - PSPTO_1242 - alginate biosynthesis protein Alg8 1210 57.63 0 1366206..1367522 - 438 28868454 algD PSPTO_1243 - GDP-mannose 6-dehydrogenase AlgD 1211 58.46 0 1368333..1369112 - 259 28868455 - PSPTO_1244 - hypothetical protein 1212 60.55 0 1369648..1370481 + 277 28868456 - PSPTO_1245 - polysaccharide deacetylase family protein 1213 56.49 0 1370776..1372170 + 464 28868457 - PSPTO_1246 - PhoH-like protein 1214 58.44 0 1372312..1372797 + 161 28868458 moaC PSPTO_1247 - molybdenum cofactor biosynthesis protein C 1215 56.50 0 1372794..1373039 + 81 28868459 moaD PSPTO_1248 - molybdenum cofactor biosynthesis protein D 1216 61.30 0 1373042..1373488 + 148 28868460 moaE PSPTO_1249 - molybdenum cofactor biosynthesis protein E 1217 56.87 0 1373711..1374394 + 227 28868461 - PSPTO_1250 - CsgG family protein 1218 56.35 0 1374416..1374793 + 125 28868462 - PSPTO_1251 - hypothetical protein 1219 60.94 0 1374790..1375452 + 220 28868463 - PSPTO_1252 - putative lipoprotein 1220 60.89 0 1375533..1376726 - 397 162533080 rhlB PSPTO_1253 - ATP-dependent RNA helicase RhlB 1221 60.45 0 1377109..1377768 - 219 28868465 estA PSPTO_1254 - carboxylesterase 1222 58.02 0 1378253..1379281 + 342 28868466 - PSPTO_1255 - amino acid ABC transporter, periplasmic amino acid-binding protein 1223 57.19 0 1379352..1380533 + 393 28868467 - PSPTO_1256 - amino acid ABC transporter, permease protein 1224 58.38 0 1380544..1381641 + 365 28868468 - PSPTO_1257 - amino acid ABC transporter, permease protein 1225 57.52 0 1381652..1382416 + 254 28868469 - PSPTO_1258 - amino acid ABC transporter, ATP-binding protein 1226 50.28 -2 1382406..1382582 - 58 28868470 - PSPTO_1259 - hypothetical protein 1227 63.90 +1 1382572..1383801 + 409 28868471 - PSPTO_1260 - cyanate MFS transporter 1228 61.71 0 1383842..1384366 + 174 28868472 - PSPTO_1261 - hypothetical protein 1229 61.32 0 1384359..1384676 + 105 28868473 - PSPTO_1262 - GIY-YIG nuclease superfamily protein 1230 60.45 0 1384741..1385673 + 310 28868474 - PSPTO_1263 - hypothetical protein 1231 57.75 0 1385856..1386068 - 70 28868475 nrdH PSPTO_1264 - glutaredoxin NrdH 1232 57.98 0 1386213..1387214 - 333 28868476 - PSPTO_1265 - nucleoid-associated protein NdpA 1233 51.77 -1 1387607..1387888 + 93 28868477 - PSPTO_1266 - HU family DNA-binding protein 1234 61.31 0 1388286..1389311 - 341 162533079 - PSPTO_1267 - putative SAM-dependent methyltransferase 1235 60.84 0 1389375..1392221 - 948 28868479 valS PSPTO_1268 - valyl-tRNA synthetase 1236 58.92 0 1392581..1393006 - 141 28868480 - PSPTO_1269 - hypothetical protein 1237 63.40 +1 1393014..1393442 - 142 28868481 holC PSPTO_1270 - DNA polymerase III subunit chi 1238 61.03 0 1393501..1394991 - 496 28868482 pepA PSPTO_1271 - leucyl aminopeptidase 1239 60.02 0 1395310..1396437 + 375 28868483 - PSPTO_1272 - hypothetical protein 1240 60.55 0 1396424..1397485 + 353 28868484 - PSPTO_1273 - hypothetical protein 58.61 MEAN 4.14 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0