version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 42 44.44 0 53180..53710 - 176 148651859 - PsycPRwf_0042 - peptide deformylase 43 43.37 0 54039..54287 - 82 148651860 - PsycPRwf_0043 - transglycosylase-associated protein 44 49.54 +1 54628..56139 - 503 148651861 - PsycPRwf_0044 - UDP-N-acetylmuramate 45 47.29 0 56198..56713 - 171 148651862 - PsycPRwf_0045 - disulphide bond formation protein DsbB 46 47.82 0 56949..58529 - 526 148651863 - PsycPRwf_0046 - glutamate--cysteine ligase 47 46.06 0 58951..59280 - 109 148651864 - PsycPRwf_0047 - iron-sulfur cluster insertion protein ErpA 48 50.33 +1 59540..61534 + 664 148651865 - PsycPRwf_0048 - ABC transporter related 49 47.84 0 61767..62786 + 339 148651866 - PsycPRwf_0049 - heat shock protein DnaJ domain-containing protein 50 47.58 0 62826..63155 + 109 148651867 - PsycPRwf_0050 - hypothetical protein 51 48.81 0 63310..64530 - 406 148651868 - PsycPRwf_0051 - serine/threonine transporter SstT 52 47.70 0 65071..65571 - 166 148651869 - PsycPRwf_0052 - DNA polymerase III chi subunit, HolC 53 47.12 0 65587..67233 - 548 148651870 - PsycPRwf_0053 - leucyl aminopeptidase 54 48.62 0 67680..69164 + 494 148651871 - PsycPRwf_0054 - permease YjgP/YjgQ family protein 55 48.74 0 69161..70510 + 449 148651872 - PsycPRwf_0055 - permease YjgP/YjgQ family protein 56 46.96 0 70721..71329 - 202 148651873 - PsycPRwf_0056 - methyltransferase small 57 48.50 0 71419..72117 - 232 148651874 - PsycPRwf_0057 - phosphoglycolate phosphatase 58 48.70 0 72142..72642 - 166 148651875 - PsycPRwf_0058 - hypothetical protein 59 43.47 0 72940..73383 - 147 148651876 - PsycPRwf_0059 - hypothetical protein 60 46.25 0 73612..74238 + 208 148651877 hisB PsycPRwf_0060 - imidazoleglycerol-phosphate dehydratase 61 48.27 0 74243..74878 + 211 148651878 hisH PsycPRwf_0061 - imidazole glycerol phosphate synthase subunit HisH 62 43.97 0 75246..75593 + 115 148651879 - PsycPRwf_0062 - hypothetical protein 63 44.14 0 75685..76128 + 147 148651880 - PsycPRwf_0063 - transmembrane pair domain-containing protein 64 49.19 0 76195..78975 - 926 148651881 acnA PsycPRwf_0064 - aconitate hydratase 65 42.50 -1 79483..79842 - 119 148651882 - PsycPRwf_0065 - hypothetical protein 66 46.04 0 79932..81788 - 618 148651883 - PsycPRwf_0066 - amidohydrolase 3 67 45.28 0 82072..83142 - 356 148651884 - PsycPRwf_0067 - hypothetical protein 68 51.57 +1 83647..84540 - 297 148651885 - PsycPRwf_0068 - alpha/beta hydrolase fold 69 46.73 0 84811..86415 + 534 148651886 - PsycPRwf_0069 - cholesterol oxidase 70 47.29 0 86426..87457 + 343 148651887 - PsycPRwf_0070 - lipoyltransferase and lipoate-protein ligase 71 40.89 -1 87576..87959 + 127 148651888 - PsycPRwf_0071 - hypothetical protein 72 42.47 -1 88199..88789 - 196 148651889 - PsycPRwf_0072 - cytochrome B561 73 49.57 +1 89243..91897 - 884 148651890 - PsycPRwf_0073 - hypothetical protein 74 44.62 0 92102..92863 - 253 148651891 - PsycPRwf_0074 - C factor cell-cell signaling protein 75 45.49 0 93199..93774 + 191 148651892 - PsycPRwf_0075 - stress protein 76 44.81 0 93929..95017 + 362 148651893 - PsycPRwf_0076 - hypothetical protein 77 47.57 0 95318..95893 + 191 148651894 - PsycPRwf_0077 - stress protein 78 47.01 0 95983..96735 + 250 148651895 - PsycPRwf_0078 - hypothetical protein 79 48.38 0 96792..97409 + 205 148651896 - PsycPRwf_0079 - stress protein 80 49.80 +1 97552..98790 - 412 148651897 - PsycPRwf_0080 - stress protein 81 48.53 0 99115..100233 + 372 148651898 - PsycPRwf_0081 - hypothetical protein 82 51.29 +1 100375..101655 + 426 148651899 - PsycPRwf_0082 - hypothetical protein 83 47.60 0 101658..102512 + 284 148651900 - PsycPRwf_0083 - hypothetical protein 84 49.00 0 102631..103830 + 399 148651901 - PsycPRwf_0084 - hypothetical protein 85 50.19 +1 103978..105015 + 345 148651902 - PsycPRwf_0085 - citrate lyase beta subunit-like protein 86 51.00 +1 105041..105742 - 233 148651903 - PsycPRwf_0086 - ABC transporter related 87 51.69 +1 105835..106635 - 266 148651904 - PsycPRwf_0087 - GDSL family lipase 88 48.22 0 106771..107388 - 205 148651905 - PsycPRwf_0088 - GCN5-related N-acetyltransferase 89 46.28 0 107494..108798 - 434 148651906 avtA PsycPRwf_0089 - valine--pyruvate transaminase 90 51.32 +1 108859..110148 - 429 148651907 - PsycPRwf_0090 - major facilitator transporter 91 44.98 0 110349..110597 - 82 148651908 - PsycPRwf_0091 - hypothetical protein 92 49.83 +1 110832..112007 - 391 148651909 - PsycPRwf_0092 - ApbE family lipoprotein 93 49.19 0 112127..112927 - 266 148651910 - PsycPRwf_0093 - short-chain dehydrogenase/reductase SDR 94 41.67 -1 113061..114344 + 427 148651911 - PsycPRwf_0094 - transposase, IS4 family protein 95 46.41 0 114491..115729 - 412 148651912 - PsycPRwf_0095 - Na(+)-translocating NADH-quinone reductase subunit F 96 44.17 0 115794..116402 - 202 148651913 - PsycPRwf_0096 - Na(+)-translocating NADH-quinone reductase subunit E 97 42.81 0 116402..117076 - 224 148651914 - PsycPRwf_0097 - Na(+)-translocating NADH-quinone reductase subunit D 98 46.41 0 117078..117941 - 287 148651915 - PsycPRwf_0098 - Na(+)-translocating NADH-quinone reductase subunit C 99 48.01 0 117925..119157 - 410 148651916 - PsycPRwf_0099 - Na(+)-translocating NADH-quinone reductase subunit B 100 48.35 0 119163..120527 - 454 148651917 - PsycPRwf_0100 - Na(+)-translocating NADH-quinone reductase subunit A 101 51.54 +1 120917..121696 + 259 148651918 - PsycPRwf_0101 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 102 48.64 0 121869..123482 + 537 148651919 - PsycPRwf_0102 - MscS mechanosensitive ion channel 103 45.83 0 123597..123812 - 71 148651920 - PsycPRwf_0103 - L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein 104 45.09 0 123847..125037 + 396 148651921 - PsycPRwf_0104 - hypothetical protein 105 47.58 0 125180..126169 + 329 148651922 - PsycPRwf_0105 - alcohol dehydrogenase 106 45.85 0 126261..126899 - 212 148651923 - PsycPRwf_0106 - 2OG-Fe(II) oxygenase 107 49.26 0 126926..127873 - 315 148651924 - PsycPRwf_0107 - alpha/beta hydrolase fold 108 49.56 +1 128077..129987 - 636 148651925 - PsycPRwf_0108 - ABC transporter related 109 47.80 0 130474..131358 + 294 148651926 - PsycPRwf_0109 - hypothetical protein 110 48.24 0 131560..132525 - 321 148651927 - PsycPRwf_0110 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 111 36.00 -2 132728..132952 + 74 148651928 - PsycPRwf_0111 - hypothetical protein 112 50.05 +1 133133..136015 + 960 148651929 - PsycPRwf_0112 - ATP-dependent helicase HepA 113 51.71 +1 136158..136625 + 155 148651930 - PsycPRwf_0113 - ybaK/ebsC protein 114 49.60 +1 136691..137065 + 124 148651931 - PsycPRwf_0114 - 5-carboxymethyl-2-hydroxymuconate isomerase-like protein 115 49.28 0 137070..137558 - 162 148651932 - PsycPRwf_0115 - hypothetical protein 116 44.15 0 137725..139545 - 606 148651933 - PsycPRwf_0116 - acyl-CoA dehydrogenase domain-containing protein 117 41.10 -1 139848..140954 - 368 148651934 - PsycPRwf_0117 - IS605 family transposase OrfB 118 47.37 0 141266..142369 + 367 148651935 - PsycPRwf_0118 - hypothetical protein 119 49.27 0 142442..143326 - 294 148651936 - PsycPRwf_0119 - shikimate 5-dehydrogenase 120 47.84 0 143813..144508 + 231 148651937 - PsycPRwf_0120 - hypothetical protein 121 51.58 +1 144592..145572 + 326 148651938 - PsycPRwf_0121 - branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein 122 38.81 -2 145518..145718 - 66 148651939 - PsycPRwf_0122 - hypothetical protein 123 38.83 -2 145859..146422 + 187 148651940 - PsycPRwf_0123 - hypothetical protein 124 41.44 -1 146473..147237 - 254 148651941 - PsycPRwf_0124 - Type II site-specific deoxyribonuclease 125 49.24 0 147359..148540 + 393 148651942 - PsycPRwf_0125 - aminodeoxychorismate lyase 126 50.24 +1 148636..149262 + 208 148651943 - PsycPRwf_0126 - dTMP kinase 127 47.53 0 149406..151688 - 760 148651944 - PsycPRwf_0127 - sodium/hydrogen exchanger 128 51.02 +1 152506..153930 + 474 148651945 - PsycPRwf_0128 - protease Do 129 46.55 0 154567..155451 - 294 148651946 - PsycPRwf_0129 - pirin domain-containing protein 130 44.77 0 155658..156164 + 168 148651947 - PsycPRwf_0130 - hypothetical protein 131 48.48 0 156290..157807 - 505 148651948 gltX PsycPRwf_0131 - glutamyl-tRNA synthetase 132 51.37 +1 158286..159305 + 339 148651949 - PsycPRwf_0132 - S-adenosyl-methyltransferase MraW 133 48.15 0 159459..159917 + 152 148651950 - PsycPRwf_0133 - cell division protein FtsL 134 48.61 0 160003..162012 + 669 148651951 - PsycPRwf_0134 - peptidoglycan glycosyltransferase 135 50.35 +1 162117..163826 + 569 148651952 - PsycPRwf_0135 - UDP-N-acetylmuramyl-tripeptide synthetase 136 50.33 +1 163891..165408 + 505 148651953 - PsycPRwf_0136 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 137 46.26 0 165724..166845 + 373 148651954 - PsycPRwf_0137 - phospho-N-acetylmuramoyl-pentapeptide-transferase 138 49.53 +1 167017..167979 + 320 148651955 - PsycPRwf_0138 - rRNA (guanine-N(1)-)-methyltransferase 139 51.22 +1 168080..169018 - 312 148651956 - PsycPRwf_0139 - tyrosine recombinase XerD 140 47.62 0 169059..169352 - 97 148651957 - PsycPRwf_0140 - SirA family protein 141 42.46 -1 169445..170551 - 368 148651958 - PsycPRwf_0141 - IS605 family transposase OrfB 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.