version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 16 39.34 -1 22432..22764 - 110 148651833 - PsycPRwf_0016 - hypothetical protein 17 51.12 +1 22768..23745 - 325 148651834 - PsycPRwf_0017 - alcohol dehydrogenase 18 47.96 0 23938..26958 - 1006 148651835 - PsycPRwf_0018 - hypothetical protein 19 47.00 0 27558..29159 + 533 148651836 - PsycPRwf_0019 - extracellular solute-binding protein 20 47.05 0 29321..30997 + 558 148651837 - PsycPRwf_0020 - extracellular solute-binding protein 21 49.05 0 31051..32736 + 561 148651838 - PsycPRwf_0021 - extracellular solute-binding protein 22 46.69 0 32839..33759 + 306 148651839 - PsycPRwf_0022 - alkaline phosphatase 23 45.70 0 33858..34763 + 301 148651840 - PsycPRwf_0023 - binding-protein-dependent transport systems inner membrane component 24 49.57 +1 34884..35930 + 348 148651841 oppD PsycPRwf_0024 - oligopeptide transporter ATP-binding component 25 49.52 +1 35934..36977 + 347 148651842 - PsycPRwf_0025 - oligopeptide/dipeptide ABC transporter, ATPase subunit 26 48.71 0 37111..37845 + 244 148651843 - PsycPRwf_0026 - hypothetical protein 27 41.89 -1 37945..38505 + 186 148651844 - PsycPRwf_0027 - hypothetical protein 28 40.58 -1 38638..38913 - 91 148651845 - PsycPRwf_0028 - hypothetical protein 29 53.99 +2 39113..40153 - 346 148651846 - PsycPRwf_0029 - 2-nitropropane dioxygenase, NPD 30 41.45 -1 40323..41258 - 311 148651847 - PsycPRwf_0030 - hypothetical protein 31 50.93 +1 41323..42834 - 503 148651848 - PsycPRwf_0031 - MATE efflux family protein 32 48.96 0 43098..44633 - 511 148651849 - PsycPRwf_0032 - hypothetical protein 33 51.01 +1 44949..45491 - 180 148651850 - PsycPRwf_0033 - hypothetical protein 34 47.37 0 45621..46781 - 386 148651851 - PsycPRwf_0034 - hydrolase of the alpha/beta-hydrolase fold-like protein 35 49.41 +1 46962..47558 - 198 148651852 - PsycPRwf_0035 - hypothetical protein 36 46.52 0 47808..48512 + 234 148651853 - PsycPRwf_0036 - pseudouridine synthase 37 47.13 0 48862..49977 + 371 148651854 - PsycPRwf_0037 - hypothetical protein 38 47.27 0 50008..50667 - 219 148651855 - PsycPRwf_0038 - hypothetical protein 39 49.21 0 50881..52014 + 377 148651856 - PsycPRwf_0039 - chaperone protein DnaJ 40 42.36 -1 52036..52179 + 47 148651857 - PsycPRwf_0040 - hypothetical protein 41 52.05 +1 52237..53064 + 275 148651858 - PsycPRwf_0041 - dihydrodipicolinate reductase 42 44.44 0 53180..53710 - 176 148651859 - PsycPRwf_0042 - peptide deformylase 43 43.37 0 54039..54287 - 82 148651860 - PsycPRwf_0043 - transglycosylase-associated protein 44 49.54 +1 54628..56139 - 503 148651861 - PsycPRwf_0044 - UDP-N-acetylmuramate 45 47.29 0 56198..56713 - 171 148651862 - PsycPRwf_0045 - disulphide bond formation protein DsbB 46 47.82 0 56949..58529 - 526 148651863 - PsycPRwf_0046 - glutamate--cysteine ligase 47 46.06 0 58951..59280 - 109 148651864 - PsycPRwf_0047 - iron-sulfur cluster insertion protein ErpA 48 50.33 +1 59540..61534 + 664 148651865 - PsycPRwf_0048 - ABC transporter related 49 47.84 0 61767..62786 + 339 148651866 - PsycPRwf_0049 - heat shock protein DnaJ domain-containing protein 50 47.58 0 62826..63155 + 109 148651867 - PsycPRwf_0050 - hypothetical protein 51 48.81 0 63310..64530 - 406 148651868 - PsycPRwf_0051 - serine/threonine transporter SstT 52 47.70 0 65071..65571 - 166 148651869 - PsycPRwf_0052 - DNA polymerase III chi subunit, HolC 53 47.12 0 65587..67233 - 548 148651870 - PsycPRwf_0053 - leucyl aminopeptidase 54 48.62 0 67680..69164 + 494 148651871 - PsycPRwf_0054 - permease YjgP/YjgQ family protein 55 48.74 0 69161..70510 + 449 148651872 - PsycPRwf_0055 - permease YjgP/YjgQ family protein 56 46.96 0 70721..71329 - 202 148651873 - PsycPRwf_0056 - methyltransferase small 57 48.50 0 71419..72117 - 232 148651874 - PsycPRwf_0057 - phosphoglycolate phosphatase 58 48.70 0 72142..72642 - 166 148651875 - PsycPRwf_0058 - hypothetical protein 59 43.47 0 72940..73383 - 147 148651876 - PsycPRwf_0059 - hypothetical protein 60 46.25 0 73612..74238 + 208 148651877 hisB PsycPRwf_0060 - imidazoleglycerol-phosphate dehydratase 61 48.27 0 74243..74878 + 211 148651878 hisH PsycPRwf_0061 - imidazole glycerol phosphate synthase subunit HisH 62 43.97 0 75246..75593 + 115 148651879 - PsycPRwf_0062 - hypothetical protein 63 44.14 0 75685..76128 + 147 148651880 - PsycPRwf_0063 - transmembrane pair domain-containing protein 64 49.19 0 76195..78975 - 926 148651881 acnA PsycPRwf_0064 - aconitate hydratase 65 42.50 -1 79483..79842 - 119 148651882 - PsycPRwf_0065 - hypothetical protein 66 46.04 0 79932..81788 - 618 148651883 - PsycPRwf_0066 - amidohydrolase 3 67 45.28 0 82072..83142 - 356 148651884 - PsycPRwf_0067 - hypothetical protein 68 51.57 +1 83647..84540 - 297 148651885 - PsycPRwf_0068 - alpha/beta hydrolase fold 69 46.73 0 84811..86415 + 534 148651886 - PsycPRwf_0069 - cholesterol oxidase 70 47.29 0 86426..87457 + 343 148651887 - PsycPRwf_0070 - lipoyltransferase and lipoate-protein ligase 71 40.89 -1 87576..87959 + 127 148651888 - PsycPRwf_0071 - hypothetical protein 72 42.47 -1 88199..88789 - 196 148651889 - PsycPRwf_0072 - cytochrome B561 73 49.57 +1 89243..91897 - 884 148651890 - PsycPRwf_0073 - hypothetical protein 74 44.62 0 92102..92863 - 253 148651891 - PsycPRwf_0074 - C factor cell-cell signaling protein 75 45.49 0 93199..93774 + 191 148651892 - PsycPRwf_0075 - stress protein 76 44.81 0 93929..95017 + 362 148651893 - PsycPRwf_0076 - hypothetical protein 77 47.57 0 95318..95893 + 191 148651894 - PsycPRwf_0077 - stress protein 78 47.01 0 95983..96735 + 250 148651895 - PsycPRwf_0078 - hypothetical protein 79 48.38 0 96792..97409 + 205 148651896 - PsycPRwf_0079 - stress protein 80 49.80 +1 97552..98790 - 412 148651897 - PsycPRwf_0080 - stress protein 81 48.53 0 99115..100233 + 372 148651898 - PsycPRwf_0081 - hypothetical protein 82 51.29 +1 100375..101655 + 426 148651899 - PsycPRwf_0082 - hypothetical protein 83 47.60 0 101658..102512 + 284 148651900 - PsycPRwf_0083 - hypothetical protein 84 49.00 0 102631..103830 + 399 148651901 - PsycPRwf_0084 - hypothetical protein 85 50.19 +1 103978..105015 + 345 148651902 - PsycPRwf_0085 - citrate lyase beta subunit-like protein 86 51.00 +1 105041..105742 - 233 148651903 - PsycPRwf_0086 - ABC transporter related 87 51.69 +1 105835..106635 - 266 148651904 - PsycPRwf_0087 - GDSL family lipase 88 48.22 0 106771..107388 - 205 148651905 - PsycPRwf_0088 - GCN5-related N-acetyltransferase 89 46.28 0 107494..108798 - 434 148651906 avtA PsycPRwf_0089 - valine--pyruvate transaminase 90 51.32 +1 108859..110148 - 429 148651907 - PsycPRwf_0090 - major facilitator transporter 91 44.98 0 110349..110597 - 82 148651908 - PsycPRwf_0091 - hypothetical protein 92 49.83 +1 110832..112007 - 391 148651909 - PsycPRwf_0092 - ApbE family lipoprotein 93 49.19 0 112127..112927 - 266 148651910 - PsycPRwf_0093 - short-chain dehydrogenase/reductase SDR 94 41.67 -1 113061..114344 + 427 148651911 - PsycPRwf_0094 - transposase, IS4 family protein 95 46.41 0 114491..115729 - 412 148651912 - PsycPRwf_0095 - Na(+)-translocating NADH-quinone reductase subunit F 96 44.17 0 115794..116402 - 202 148651913 - PsycPRwf_0096 - Na(+)-translocating NADH-quinone reductase subunit E 97 42.81 0 116402..117076 - 224 148651914 - PsycPRwf_0097 - Na(+)-translocating NADH-quinone reductase subunit D 98 46.41 0 117078..117941 - 287 148651915 - PsycPRwf_0098 - Na(+)-translocating NADH-quinone reductase subunit C 99 48.01 0 117925..119157 - 410 148651916 - PsycPRwf_0099 - Na(+)-translocating NADH-quinone reductase subunit B 100 48.35 0 119163..120527 - 454 148651917 - PsycPRwf_0100 - Na(+)-translocating NADH-quinone reductase subunit A 101 51.54 +1 120917..121696 + 259 148651918 - PsycPRwf_0101 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 102 48.64 0 121869..123482 + 537 148651919 - PsycPRwf_0102 - MscS mechanosensitive ion channel 103 45.83 0 123597..123812 - 71 148651920 - PsycPRwf_0103 - L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein 104 45.09 0 123847..125037 + 396 148651921 - PsycPRwf_0104 - hypothetical protein 105 47.58 0 125180..126169 + 329 148651922 - PsycPRwf_0105 - alcohol dehydrogenase 106 45.85 0 126261..126899 - 212 148651923 - PsycPRwf_0106 - 2OG-Fe(II) oxygenase 107 49.26 0 126926..127873 - 315 148651924 - PsycPRwf_0107 - alpha/beta hydrolase fold 108 49.56 +1 128077..129987 - 636 148651925 - PsycPRwf_0108 - ABC transporter related 109 47.80 0 130474..131358 + 294 148651926 - PsycPRwf_0109 - hypothetical protein 110 48.24 0 131560..132525 - 321 148651927 - PsycPRwf_0110 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 111 36.00 -2 132728..132952 + 74 148651928 - PsycPRwf_0111 - hypothetical protein 112 50.05 +1 133133..136015 + 960 148651929 - PsycPRwf_0112 - ATP-dependent helicase HepA 113 51.71 +1 136158..136625 + 155 148651930 - PsycPRwf_0113 - ybaK/ebsC protein 114 49.60 +1 136691..137065 + 124 148651931 - PsycPRwf_0114 - 5-carboxymethyl-2-hydroxymuconate isomerase-like protein 115 49.28 0 137070..137558 - 162 148651932 - PsycPRwf_0115 - hypothetical protein 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.