version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 474 51.18 +1 569147..573253 - 1368 148652291 - PsycPRwf_0479 - ribonuclease 475 45.94 0 574538..575632 + 364 148652292 - PsycPRwf_0480 - RluA family pseudouridine synthase 476 49.14 0 575660..576355 + 231 148652293 - PsycPRwf_0481 - HAD family hydrolase 477 47.89 0 576465..577412 + 315 148652294 ubiA PsycPRwf_0482 - prenyltransferase 478 47.42 0 577437..578075 + 212 148652295 - PsycPRwf_0483 - hypothetical protein 479 48.89 0 578070..578744 - 224 148652296 - PsycPRwf_0484 - hypothetical protein 480 48.36 0 579260..579685 - 141 148652297 - PsycPRwf_0485 - hypothetical protein 481 43.92 0 579917..580492 - 191 148652298 - PsycPRwf_0486 - translation elongation factor P 482 45.84 0 580550..581668 + 372 148652299 - PsycPRwf_0487 - lysine 2,3-aminomutase YodO family protein 483 49.80 +1 581680..582189 + 169 148652300 - PsycPRwf_0488 - cytochrome c, class I 484 49.23 0 582291..582875 - 194 148652301 - PsycPRwf_0489 - peptidase M23B 485 47.72 0 583024..585873 - 949 148652302 fadE PsycPRwf_0490 - acyl-CoA dehydrogenase 486 47.58 0 586233..586913 - 226 148652303 - PsycPRwf_0491 - DNA repair protein RadC 487 46.68 0 587286..588536 + 416 148652304 - PsycPRwf_0492 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 488 45.68 0 588651..589460 + 269 148652305 - PsycPRwf_0493 - nitroreductase 489 47.58 0 589519..590283 + 254 148652306 - PsycPRwf_0494 - hypothetical protein 490 50.57 +1 590399..591094 + 231 148652307 - PsycPRwf_0495 - HhH-GPD family protein 491 48.28 0 591124..592053 - 309 148652308 - PsycPRwf_0496 - uroporphyrin-III C/tetrapyrrole methyltransferase 492 51.05 +1 592160..592588 + 142 148652309 - PsycPRwf_0497 - hypothetical protein 493 47.54 0 592781..593653 + 290 148652310 - PsycPRwf_0498 - transport-associated 494 47.97 0 593785..594645 + 286 148652311 - PsycPRwf_0499 - esterase/lipase-like protein 495 45.49 0 594992..595246 + 84 148652312 - PsycPRwf_0500 - BolA family protein 496 50.65 +1 595457..596755 + 432 148652313 - PsycPRwf_0501 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 497 47.02 0 596809..597480 + 223 148652314 hisG PsycPRwf_0502 - ATP phosphoribosyltransferase catalytic subunit 498 50.73 +1 597669..598961 + 430 148652315 hisD PsycPRwf_0503 - histidinol dehydrogenase 499 45.20 0 599288..600391 + 367 148652316 - PsycPRwf_0504 - histidinol-phosphate aminotransferase 500 48.24 0 600538..602241 - 567 148652317 - PsycPRwf_0505 - anthranilate synthase component I/chorismate-binding protein 501 44.67 0 602708..604012 + 434 148652318 - PsycPRwf_0506 - hypothetical protein 502 43.37 0 604291..604569 + 92 148652319 rpmE2 PsycPRwf_0507 - 50S ribosomal protein L31 type B 503 49.44 +1 604746..606080 - 444 148652320 - PsycPRwf_0508 - secretion protein HlyD family protein 504 45.47 0 606171..607793 - 540 148652321 - PsycPRwf_0509 - hypothetical protein 505 46.36 0 608053..609603 - 516 148652322 - PsycPRwf_0510 - integral membrane protein MviN 506 47.96 0 609840..610721 + 293 148652323 - PsycPRwf_0511 - HpcH/HpaI aldolase 507 44.93 0 610754..611374 - 206 148652324 - PsycPRwf_0512 - N-acetyl-anhydromuranmyl-L-alanine amidase 508 47.09 0 611553..613565 + 670 148652325 - PsycPRwf_0513 - hypothetical protein 509 49.12 0 613594..615018 + 474 148652326 - PsycPRwf_0514 - PGAP1 family protein 510 35.99 -2 615042..615869 - 275 148652327 - PsycPRwf_0515 - hypothetical protein 511 44.16 0 615879..618797 - 972 148652328 - PsycPRwf_0516 - hypothetical protein 512 42.83 0 618962..619561 - 199 148652329 - PsycPRwf_0517 - hypothetical protein 513 41.23 -1 619708..620391 - 227 148652330 - PsycPRwf_0518 - hypothetical protein 514 46.69 0 620808..621698 + 296 148652331 - PsycPRwf_0519 - NAD-dependent epimerase/dehydratase 515 45.63 0 621771..623153 + 460 148652332 - PsycPRwf_0520 - hypothetical protein 516 44.74 0 623311..623985 + 224 148652333 pyrE PsycPRwf_0521 - orotate phosphoribosyltransferase 517 45.50 0 624098..625075 + 325 148652334 - PsycPRwf_0522 - glutathione synthetase 518 42.12 -1 625255..625698 + 147 148652335 - PsycPRwf_0523 - hypothetical protein 519 50.86 +1 626072..627229 + 385 148652336 - PsycPRwf_0524 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 520 47.38 0 627401..628831 + 476 148652337 - PsycPRwf_0525 - UDP-N-acetylmuramate--alanine ligase 521 47.15 0 628973..629971 + 332 148652338 - PsycPRwf_0526 - D-alanine--D-alanine ligase 522 41.19 -1 630195..631136 + 313 148652339 - PsycPRwf_0527 - cell division protein FtsQ 523 41.80 -1 631489..632787 + 432 148652340 - PsycPRwf_0528 - cell division protein FtsA 524 45.31 0 632868..634061 + 397 148652341 - PsycPRwf_0529 - cell division protein FtsZ 525 41.39 -1 634258..635151 + 297 148652342 lpxC PsycPRwf_0530 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 526 38.70 -2 635447..635986 - 179 148652343 - PsycPRwf_0531 - hypothetical protein 527 44.49 0 636176..636901 + 241 148652344 - PsycPRwf_0532 - hypothetical protein 528 47.32 0 637134..637469 - 111 148652345 - PsycPRwf_0533 - hypothetical protein 529 48.34 0 637759..638391 + 210 148652346 - PsycPRwf_0534 - ribosomal RNA methyltransferase RrmJ/FtsJ 530 46.82 0 638918..640801 + 627 148652347 - PsycPRwf_0535 - ATP-dependent metalloprotease FtsH 531 47.59 0 640968..641879 + 303 148652348 - PsycPRwf_0536 - dihydropteroate synthase 532 42.49 -1 641974..642246 + 90 148652349 - PsycPRwf_0537 - hypothetical protein 533 47.81 0 642284..642739 + 151 148652350 - PsycPRwf_0538 - hypothetical protein 534 49.28 0 642873..643562 + 229 148652351 - PsycPRwf_0539 - hypothetical protein 535 46.90 0 643800..644492 + 230 148652352 - PsycPRwf_0540 - peptidase M22, glycoprotease 536 45.77 0 644574..645425 + 283 148652353 - PsycPRwf_0541 - putative undecaprenol kinase 537 49.72 +1 645507..646385 + 292 148652354 - PsycPRwf_0542 - hypothetical protein 538 45.85 0 646489..647151 + 220 148652355 - PsycPRwf_0543 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 539 43.64 0 647280..647774 - 164 148652356 - PsycPRwf_0544 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 540 48.44 0 648200..652225 + 1341 148652357 - PsycPRwf_0545 - phosphoribosylformylglycinamidine synthase 541 32.74 -2 652557..653894 + 445 148652358 - PsycPRwf_0546 - hypothetical protein 542 35.04 -2 654540..654656 + 38 148652359 - PsycPRwf_0547 - hypothetical protein 543 47.58 0 654873..655679 + 268 148652360 - PsycPRwf_0548 - peptidase M48, Ste24p 544 44.34 0 655749..656675 - 308 148652361 - PsycPRwf_0549 - N-acetylmuramoyl-L-alanine amidase 545 43.85 0 657155..657601 + 148 148652362 - PsycPRwf_0550 - hypothetical protein 546 46.59 0 657776..658318 - 180 148652363 - PsycPRwf_0551 - membrane protein-like protein 547 49.39 +1 658399..660447 - 682 148652364 - PsycPRwf_0552 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 548 46.53 0 660577..661182 - 201 148652365 - PsycPRwf_0553 - DNA polymerase III subunit epsilon 549 48.34 0 661247..663292 - 681 148652366 - PsycPRwf_0554 - signal-transduction protein 550 49.59 +1 663433..664662 - 409 148652367 - PsycPRwf_0555 - hypothetical protein 551 47.67 0 664723..667422 - 899 148652368 - PsycPRwf_0556 - metal dependent phosphohydrolase 552 45.82 0 667592..668392 - 266 148652369 - PsycPRwf_0557 - methionine aminopeptidase, type I 553 44.44 0 668986..669840 + 284 148652370 rpsB PsycPRwf_0558 - 30S ribosomal protein S2 554 45.16 0 670033..670911 + 292 148652371 tsf PsycPRwf_0559 - elongation factor Ts 555 43.05 0 671087..671971 + 294 148652372 - PsycPRwf_0560 - hypothetical protein 556 46.80 0 672122..674920 - 932 148652373 - PsycPRwf_0561 - phosphoenolpyruvate carboxylase 557 43.46 0 675007..675312 - 101 148652374 - PsycPRwf_0562 - putative mono-oxygenase ydhR 558 45.90 0 675528..676490 + 320 148652375 - PsycPRwf_0563 - hypothetical protein 559 47.68 0 676608..677987 - 459 148652376 - PsycPRwf_0564 - uracil-xanthine permease 560 49.09 0 678276..678827 - 183 148652377 - PsycPRwf_0565 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 561 45.97 0 678863..680500 - 545 148652378 - PsycPRwf_0566 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 562 42.06 -1 681129..681758 + 209 148652379 - PsycPRwf_0567 - BLUF domain-containing protein 563 46.80 0 681872..683386 - 504 148652380 - PsycPRwf_0568 - FAD linked oxidase domain-containing protein 564 45.48 0 683754..684980 + 408 148652381 - PsycPRwf_0569 - D-3-phosphoglycerate dehydrogenase 565 46.28 0 685307..686194 + 295 148652382 - PsycPRwf_0570 - beta-lactamase domain-containing protein 566 45.36 0 686506..686871 + 121 148652383 - PsycPRwf_0571 - hypothetical protein 567 49.63 +1 687016..688095 - 359 148652384 - PsycPRwf_0572 - cation diffusion facilitator family transporter 568 49.89 +1 688226..690550 - 774 148652385 - PsycPRwf_0573 - primosomal protein N' 569 47.47 0 690651..691046 - 131 148652386 - PsycPRwf_0574 - putative endoribonuclease L-PSP 570 46.70 0 691102..693285 - 727 148652387 - PsycPRwf_0575 - metal dependent phosphohydrolase 571 49.04 0 693851..694111 - 86 148652388 - PsycPRwf_0576 - DNA-directed RNA polymerase, omega subunit 572 47.97 0 694250..694864 - 204 148652389 - PsycPRwf_0577 - guanylate kinase 573 48.28 0 695083..696039 + 318 148652390 - PsycPRwf_0578 - hydroxymethylbutenyl pyrophosphate reductase 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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