version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 432 39.94 -1 528420..528737 + 105 148652249 rplX PsycPRwf_0437 - 50S ribosomal protein L24 433 43.58 0 528759..529295 + 178 148652250 rplE PsycPRwf_0438 - 50S ribosomal protein L5 434 43.46 0 529308..529613 + 101 148652251 rpsN PsycPRwf_0439 - 30S ribosomal protein S14 435 45.11 0 529626..530024 + 132 148652252 rpsH PsycPRwf_0440 - 30S ribosomal protein S8 436 41.39 -1 530219..530752 + 177 148652253 rplF PsycPRwf_0441 - 50S ribosomal protein L6 437 47.01 0 530764..531114 + 116 148652254 rplR PsycPRwf_0442 - 50S ribosomal protein L18 438 43.17 0 531117..531614 + 165 148652255 rpsE PsycPRwf_0443 - 30S ribosomal protein S5 439 43.33 0 531648..531827 + 59 148652256 rpmD PsycPRwf_0444 - 50S ribosomal protein L30 440 44.66 0 531827..532285 + 152 148652257 rplO PsycPRwf_0445 - 50S ribosomal protein L15 441 42.79 0 532291..533622 + 443 148652258 secY PsycPRwf_0446 - preprotein translocase subunit SecY 442 43.98 0 534035..534391 + 118 148652259 rpsM PsycPRwf_0447 - 30S ribosomal protein S13 443 47.33 0 534412..534804 + 130 148652260 - PsycPRwf_0448 - 30S ribosomal protein S11 444 41.90 -1 534917..535558 + 213 148652261 rpsD PsycPRwf_0449 - 30S ribosomal protein S4 445 43.45 0 535598..536605 + 335 148652262 - PsycPRwf_0450 - DNA-directed RNA polymerase subunit alpha 446 45.83 0 536626..536985 + 119 148652263 rplQ PsycPRwf_0451 - 50S ribosomal protein L17 447 45.09 0 537265..537885 - 206 148652264 - PsycPRwf_0452 - Sua5/YciO/YrdC/YwlC family protein 448 45.54 0 538057..538728 - 223 148652265 - PsycPRwf_0453 - hypothetical protein 449 43.52 0 538809..539456 + 215 148652266 - PsycPRwf_0454 - hypothetical protein 450 45.36 0 539725..539907 + 60 148652267 rpmF PsycPRwf_0455 - 50S ribosomal protein L32 451 45.65 0 540030..541028 + 332 148652268 - PsycPRwf_0456 - malonyl CoA-acyl carrier protein transacylase 452 47.33 0 541028..541756 + 242 148652269 - PsycPRwf_0457 - 3-oxoacyl-(acyl-carrier-protein) reductase 453 34.57 -2 541984..542226 + 80 148652270 - PsycPRwf_0458 - acyl carrier protein 454 39.25 -1 542595..543101 + 168 148652271 - PsycPRwf_0459 - hypothetical protein 455 49.54 +1 543328..544524 - 398 148652272 - PsycPRwf_0460 - hypothetical protein 456 50.36 +1 544618..546297 + 559 148652273 - PsycPRwf_0461 - carbohydrate kinase, YjeF related protein 457 48.13 0 546373..546960 - 195 148652274 - PsycPRwf_0462 - hypothetical protein 458 48.23 0 547066..547629 - 187 148652275 - PsycPRwf_0463 - NUDIX hydrolase 459 51.02 +1 547859..548842 + 327 148652276 - PsycPRwf_0464 - NUDIX hydrolase 460 48.64 0 548880..549944 - 354 148652277 - PsycPRwf_0465 - biotin/lipoate A/B protein ligase 461 51.17 +1 550210..551022 + 270 148652278 - PsycPRwf_0466 - hypothetical protein 462 48.76 0 551141..554983 + 1280 148652279 - PsycPRwf_0467 - SMC domain-containing protein 463 45.91 0 555167..556192 + 341 148652280 - PsycPRwf_0468 - ZipA, C-terminal FtsZ-binding region 464 48.24 0 556346..557224 - 292 148652281 - PsycPRwf_0469 - short chain dehydrogenase 465 49.66 +1 557291..558025 - 244 148652282 - PsycPRwf_0470 - phosphoglycerate mutase 466 49.75 +1 558086..559297 - 403 148652283 - PsycPRwf_0471 - aminoglycoside phosphotransferase 467 50.96 +1 559448..560695 - 415 148652284 - PsycPRwf_0472 - acyl-CoA dehydrogenase domain-containing protein 468 49.64 +1 561020..563080 + 686 148652285 - PsycPRwf_0473 - DNA ligase, NAD-dependent 469 45.34 0 563289..564554 + 421 148652286 - PsycPRwf_0474 - FAD dependent oxidoreductase 470 45.13 0 564725..565063 + 112 148652287 - PsycPRwf_0475 - endoribonuclease L-PSP 471 48.33 0 565220..565879 - 219 148652288 - PsycPRwf_0476 - hypothetical protein 472 46.68 0 565988..567703 - 571 148652289 - PsycPRwf_0477 - von Willebrand factor, type A 473 46.30 0 568093..569010 + 305 148652290 - PsycPRwf_0478 - hypothetical protein 474 51.18 +1 569147..573253 - 1368 148652291 - PsycPRwf_0479 - ribonuclease 475 45.94 0 574538..575632 + 364 148652292 - PsycPRwf_0480 - RluA family pseudouridine synthase 476 49.14 0 575660..576355 + 231 148652293 - PsycPRwf_0481 - HAD family hydrolase 477 47.89 0 576465..577412 + 315 148652294 ubiA PsycPRwf_0482 - prenyltransferase 478 47.42 0 577437..578075 + 212 148652295 - PsycPRwf_0483 - hypothetical protein 479 48.89 0 578070..578744 - 224 148652296 - PsycPRwf_0484 - hypothetical protein 480 48.36 0 579260..579685 - 141 148652297 - PsycPRwf_0485 - hypothetical protein 481 43.92 0 579917..580492 - 191 148652298 - PsycPRwf_0486 - translation elongation factor P 482 45.84 0 580550..581668 + 372 148652299 - PsycPRwf_0487 - lysine 2,3-aminomutase YodO family protein 483 49.80 +1 581680..582189 + 169 148652300 - PsycPRwf_0488 - cytochrome c, class I 484 49.23 0 582291..582875 - 194 148652301 - PsycPRwf_0489 - peptidase M23B 485 47.72 0 583024..585873 - 949 148652302 fadE PsycPRwf_0490 - acyl-CoA dehydrogenase 486 47.58 0 586233..586913 - 226 148652303 - PsycPRwf_0491 - DNA repair protein RadC 487 46.68 0 587286..588536 + 416 148652304 - PsycPRwf_0492 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 488 45.68 0 588651..589460 + 269 148652305 - PsycPRwf_0493 - nitroreductase 489 47.58 0 589519..590283 + 254 148652306 - PsycPRwf_0494 - hypothetical protein 490 50.57 +1 590399..591094 + 231 148652307 - PsycPRwf_0495 - HhH-GPD family protein 491 48.28 0 591124..592053 - 309 148652308 - PsycPRwf_0496 - uroporphyrin-III C/tetrapyrrole methyltransferase 492 51.05 +1 592160..592588 + 142 148652309 - PsycPRwf_0497 - hypothetical protein 493 47.54 0 592781..593653 + 290 148652310 - PsycPRwf_0498 - transport-associated 494 47.97 0 593785..594645 + 286 148652311 - PsycPRwf_0499 - esterase/lipase-like protein 495 45.49 0 594992..595246 + 84 148652312 - PsycPRwf_0500 - BolA family protein 496 50.65 +1 595457..596755 + 432 148652313 - PsycPRwf_0501 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 497 47.02 0 596809..597480 + 223 148652314 hisG PsycPRwf_0502 - ATP phosphoribosyltransferase catalytic subunit 498 50.73 +1 597669..598961 + 430 148652315 hisD PsycPRwf_0503 - histidinol dehydrogenase 499 45.20 0 599288..600391 + 367 148652316 - PsycPRwf_0504 - histidinol-phosphate aminotransferase 500 48.24 0 600538..602241 - 567 148652317 - PsycPRwf_0505 - anthranilate synthase component I/chorismate-binding protein 501 44.67 0 602708..604012 + 434 148652318 - PsycPRwf_0506 - hypothetical protein 502 43.37 0 604291..604569 + 92 148652319 rpmE2 PsycPRwf_0507 - 50S ribosomal protein L31 type B 503 49.44 +1 604746..606080 - 444 148652320 - PsycPRwf_0508 - secretion protein HlyD family protein 504 45.47 0 606171..607793 - 540 148652321 - PsycPRwf_0509 - hypothetical protein 505 46.36 0 608053..609603 - 516 148652322 - PsycPRwf_0510 - integral membrane protein MviN 506 47.96 0 609840..610721 + 293 148652323 - PsycPRwf_0511 - HpcH/HpaI aldolase 507 44.93 0 610754..611374 - 206 148652324 - PsycPRwf_0512 - N-acetyl-anhydromuranmyl-L-alanine amidase 508 47.09 0 611553..613565 + 670 148652325 - PsycPRwf_0513 - hypothetical protein 509 49.12 0 613594..615018 + 474 148652326 - PsycPRwf_0514 - PGAP1 family protein 510 35.99 -2 615042..615869 - 275 148652327 - PsycPRwf_0515 - hypothetical protein 511 44.16 0 615879..618797 - 972 148652328 - PsycPRwf_0516 - hypothetical protein 512 42.83 0 618962..619561 - 199 148652329 - PsycPRwf_0517 - hypothetical protein 513 41.23 -1 619708..620391 - 227 148652330 - PsycPRwf_0518 - hypothetical protein 514 46.69 0 620808..621698 + 296 148652331 - PsycPRwf_0519 - NAD-dependent epimerase/dehydratase 515 45.63 0 621771..623153 + 460 148652332 - PsycPRwf_0520 - hypothetical protein 516 44.74 0 623311..623985 + 224 148652333 pyrE PsycPRwf_0521 - orotate phosphoribosyltransferase 517 45.50 0 624098..625075 + 325 148652334 - PsycPRwf_0522 - glutathione synthetase 518 42.12 -1 625255..625698 + 147 148652335 - PsycPRwf_0523 - hypothetical protein 519 50.86 +1 626072..627229 + 385 148652336 - PsycPRwf_0524 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 520 47.38 0 627401..628831 + 476 148652337 - PsycPRwf_0525 - UDP-N-acetylmuramate--alanine ligase 521 47.15 0 628973..629971 + 332 148652338 - PsycPRwf_0526 - D-alanine--D-alanine ligase 522 41.19 -1 630195..631136 + 313 148652339 - PsycPRwf_0527 - cell division protein FtsQ 523 41.80 -1 631489..632787 + 432 148652340 - PsycPRwf_0528 - cell division protein FtsA 524 45.31 0 632868..634061 + 397 148652341 - PsycPRwf_0529 - cell division protein FtsZ 525 41.39 -1 634258..635151 + 297 148652342 lpxC PsycPRwf_0530 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 526 38.70 -2 635447..635986 - 179 148652343 - PsycPRwf_0531 - hypothetical protein 527 44.49 0 636176..636901 + 241 148652344 - PsycPRwf_0532 - hypothetical protein 528 47.32 0 637134..637469 - 111 148652345 - PsycPRwf_0533 - hypothetical protein 529 48.34 0 637759..638391 + 210 148652346 - PsycPRwf_0534 - ribosomal RNA methyltransferase RrmJ/FtsJ 530 46.82 0 638918..640801 + 627 148652347 - PsycPRwf_0535 - ATP-dependent metalloprotease FtsH 531 47.59 0 640968..641879 + 303 148652348 - PsycPRwf_0536 - dihydropteroate synthase 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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