version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 291 48.48 0 351076..351834 + 252 148652108 - PsycPRwf_0296 - transcriptional regulator IclR-like protein 292 49.68 +1 351928..352857 - 309 148652109 - PsycPRwf_0297 - 3-hydroxyisobutyrate dehydrogenase 293 50.16 +1 352971..354254 - 427 148652110 - PsycPRwf_0298 - enoyl-CoA hydratase/isomerase 294 49.43 +1 354304..355086 - 260 148652111 - PsycPRwf_0299 - enoyl-CoA hydratase 295 49.70 +1 355277..356443 - 388 148652112 - PsycPRwf_0300 - acyl-CoA dehydrogenase domain-containing protein 296 49.53 +1 356685..358172 - 495 148652113 - PsycPRwf_0301 - methylmalonate-semialdehyde dehydrogenase 297 51.71 +1 358463..360475 - 670 148652114 - PsycPRwf_0302 - propionyl-CoA synthetase 298 48.64 0 360701..361909 - 402 148652115 - PsycPRwf_0303 - major facilitator transporter 299 47.31 0 362108..363037 - 309 148652116 - PsycPRwf_0304 - short-chain dehydrogenase/reductase SDR 300 45.23 0 363423..364700 - 425 148652117 clpX PsycPRwf_0305 - ATP-dependent protease ATP-binding subunit 301 47.72 0 364905..365627 - 240 148652118 - PsycPRwf_0306 - ATP-dependent Clp protease, proteolytic subunit ClpP 302 44.69 0 366062..367399 - 445 148652119 tig PsycPRwf_0307 - trigger factor 303 50.92 +1 367799..368452 - 217 148652120 - PsycPRwf_0308 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 304 44.60 0 369362..369991 + 209 148652121 - PsycPRwf_0309 - superoxide dismutase 305 47.14 0 370090..370929 - 279 148652122 - PsycPRwf_0310 - hypothetical protein 306 49.34 +1 371286..372641 + 451 148652123 - PsycPRwf_0311 - glutamyl-tRNA reductase 307 43.16 0 372794..373414 - 206 148652124 - PsycPRwf_0312 - rhomboid family protein 308 45.85 0 373860..375473 + 537 148652125 - PsycPRwf_0313 - OmpA/MotB domain-containing protein 309 51.35 +1 375637..376707 - 356 148652126 - PsycPRwf_0314 - beta-hexosaminidase 310 46.65 0 376938..379145 + 735 148652127 - PsycPRwf_0315 - carboxyl-terminal protease 311 43.14 0 380014..380217 - 67 148652128 - PsycPRwf_0316 - CsbD family protein 312 43.69 0 380341..381093 + 250 148652129 - PsycPRwf_0317 - transposase, IS4 family protein 313 48.89 0 382403..384067 - 554 148652130 - PsycPRwf_0318 - integral membrane sensor signal transduction histidine kinase 314 46.73 0 384181..384852 - 223 148652131 - PsycPRwf_0319 - two component transcriptional regulator 315 48.03 0 385199..385756 + 185 148652132 - PsycPRwf_0320 - hypothetical protein 316 47.98 0 385909..386652 - 247 148652133 - PsycPRwf_0321 - aminomethyltransferase related to GcvT-like protein 317 44.73 0 386898..387248 + 116 148652134 - PsycPRwf_0322 - alkylphosphonate utilization operon protein PhnA 318 44.07 0 387399..388283 - 294 148652135 - PsycPRwf_0323 - DegV family protein 319 44.05 0 388609..389718 + 369 148652136 - PsycPRwf_0324 - hypothetical protein 320 51.65 +1 389854..391644 - 596 148652137 - PsycPRwf_0325 - ABC transporter related 321 50.68 +1 391637..393475 - 612 148652138 - PsycPRwf_0326 - cysteine ABC transporter permease/ATP-binding protein 322 46.47 0 394133..395731 + 532 148652139 - PsycPRwf_0327 - cytochrome bd ubiquinol oxidase, subunit I 323 48.33 0 395721..396860 + 379 148652140 - PsycPRwf_0328 - cytochrome d ubiquinol oxidase, subunit II 324 42.31 -1 396887..397042 + 51 148652141 - PsycPRwf_0329 - cyd operon protein YbgT 325 48.16 0 397233..398561 + 442 148652142 - PsycPRwf_0330 - glutamate-1-semialdehyde-2,1-aminomutase 326 47.27 0 398881..400401 + 506 148652143 - PsycPRwf_0331 - Ppx/GppA phosphatase 327 47.21 0 400454..401260 + 268 148652144 - PsycPRwf_0332 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 328 43.81 0 401654..401863 + 69 148652145 - PsycPRwf_0333 - cold-shock DNA-binding domain-containing protein 329 49.55 +1 402172..404508 + 778 148652146 - PsycPRwf_0334 - oxidoreductase alpha (molybdopterin) subunit 330 51.67 +1 404540..405679 + 379 148652147 - PsycPRwf_0335 - formate dehydrogenase, subunit FdhD 331 50.51 +1 405792..407369 + 525 148652148 - PsycPRwf_0336 - tRNA(Ile)-lysidine synthetase 332 48.53 0 407667..408515 + 282 148652149 - PsycPRwf_0337 - pyrroline-5-carboxylate reductase 333 42.68 0 408629..409195 + 188 148652150 - PsycPRwf_0338 - protein of unknown function YGGT 334 47.51 0 410010..410672 + 220 148652151 - PsycPRwf_0339 - RDD domain-containing protein 335 42.71 0 410910..411389 + 159 148652152 - PsycPRwf_0340 - hemerythrin HHE cation binding domain-containing protein 336 49.50 +1 411692..412792 + 366 148652153 - PsycPRwf_0341 - N-ethylmaleimide reductase 337 47.97 0 412914..413651 - 245 148652154 - PsycPRwf_0342 - pantothenate kinase 338 46.91 0 413879..414283 - 134 148652155 - PsycPRwf_0343 - iojap-like protein 339 48.16 0 414449..415264 - 271 148652156 - PsycPRwf_0344 - nicotinate (nicotinamide) nucleotide adenylyltransferase 340 50.47 +1 415573..417720 - 715 148652157 - PsycPRwf_0345 - phosphate acetyltransferase 341 47.71 0 417845..419047 - 400 148652158 - PsycPRwf_0346 - acetate kinase 342 40.29 -1 419472..419816 + 114 148652159 - PsycPRwf_0347 - hypothetical protein 343 48.06 0 419924..421261 + 445 148652160 - PsycPRwf_0348 - diaminopimelate decarboxylase 344 50.45 +1 421543..422424 + 293 148652161 - PsycPRwf_0349 - diaminopimelate epimerase 345 52.05 +1 422454..423479 + 341 148652162 - PsycPRwf_0350 - phage integrase family protein 346 52.32 +1 423586..424470 - 294 148652163 - PsycPRwf_0351 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 347 46.28 0 424961..426706 + 581 148652164 - PsycPRwf_0352 - RNA polymerase, sigma 54 subunit, RpoN 348 42.61 0 427202..427600 + 132 148652165 - PsycPRwf_0353 - sigma 54 modulation protein/ribosomal protein S30EA 349 44.28 0 427837..428037 - 66 148652166 - PsycPRwf_0354 - thiamine biosynthesis protein ThiS 350 48.91 0 428088..428453 - 121 148652167 - PsycPRwf_0355 - hypothetical protein 351 48.08 0 428621..429739 - 372 148652168 - PsycPRwf_0356 - RNA polymerase factor sigma-32 352 46.93 0 429796..430170 - 124 148652169 - PsycPRwf_0357 - SirA family protein 353 48.88 0 430615..432216 + 533 148652170 - PsycPRwf_0358 - peptidase M48, Ste24p 354 42.67 0 432252..432701 - 149 148652171 - PsycPRwf_0359 - GatB/Yqey domain-containing protein 355 44.44 0 432986..433201 - 71 148652172 rpsU PsycPRwf_0360 - 30S ribosomal protein S21 356 53.29 +2 433867..434292 + 141 148652173 - PsycPRwf_0361 - hypothetical protein 357 50.17 +1 434455..435042 + 195 148652174 - PsycPRwf_0362 - cytochrome c5-like protein 358 48.56 0 435335..436378 + 347 148652175 - PsycPRwf_0363 - metalloendopeptidase glycoprotease family 359 50.54 +1 436392..436763 + 123 148652176 - PsycPRwf_0364 - CrcB protein 360 49.48 +1 436782..437741 - 319 148652177 - PsycPRwf_0365 - LysR family transcriptional regulator 361 44.32 0 438256..439629 + 457 148652178 - PsycPRwf_0366 - sodium:dicarboxylate symporter 362 41.64 -1 439840..440946 + 368 148652179 - PsycPRwf_0367 - IS605 family transposase OrfB 363 49.41 +1 440960..441724 - 254 148652180 - PsycPRwf_0368 - hypothetical protein 364 46.67 0 442104..443303 + 399 148652181 - PsycPRwf_0369 - Na+/H+ antiporter NhaA 365 48.72 0 443472..444017 + 181 148652182 - PsycPRwf_0370 - hypothetical protein 366 43.59 0 444315..444704 + 129 148652183 - PsycPRwf_0371 - hypothetical protein 367 46.20 0 445772..447574 + 600 148652184 - PsycPRwf_0372 - GTP-binding protein LepA 368 45.46 0 447733..448878 + 381 148652185 - PsycPRwf_0373 - signal peptidase I 369 46.92 0 449067..449846 + 259 148652186 - PsycPRwf_0374 - ribonuclease III 370 44.80 0 449984..451003 + 339 148652187 era PsycPRwf_0375 - GTP-binding protein Era 371 45.20 0 451091..451798 + 235 148652188 - PsycPRwf_0376 - DNA repair protein RecO 372 46.61 0 451899..452666 + 255 148652189 - PsycPRwf_0377 - pyridoxal phosphate biosynthetic protein PdxJ 373 38.69 -2 452719..453372 - 217 148652190 - PsycPRwf_0378 - hypothetical protein 374 45.46 0 453804..455015 + 403 148652191 - PsycPRwf_0379 - OmpA/MotB domain-containing protein 375 42.69 0 455216..457063 + 615 148652192 - PsycPRwf_0380 - GTP-binding protein TypA 376 41.44 -1 457404..457835 + 143 148652193 - PsycPRwf_0381 - large conductance mechanosensitive channel protein 377 44.48 0 457938..458861 - 307 148652194 - PsycPRwf_0382 - formamidopyrimidine-DNA glycosylase 378 46.33 0 458864..461557 - 897 148652195 - PsycPRwf_0383 - (p)ppGpp synthetase I, SpoT/RelA 379 48.55 0 461801..463351 - 516 148652196 rumA PsycPRwf_0384 - 23S rRNA 5-methyluridine methyltransferase 380 45.19 0 463603..464412 - 269 148652197 - PsycPRwf_0385 - hypothetical protein 381 48.63 0 464533..465480 - 315 148652198 cysM PsycPRwf_0386 - cysteine synthase B 382 47.64 0 465660..469133 + 1157 148652199 - PsycPRwf_0387 - multi-sensor hybrid histidine kinase 383 45.41 0 469186..470013 + 275 148652200 - PsycPRwf_0388 - enoyl-CoA hydratase 384 45.60 0 470331..471545 + 404 148652201 - PsycPRwf_0389 - Bcr/CflA subfamily drug resistance transporter 385 51.42 +1 471724..472215 - 163 148652202 - PsycPRwf_0390 - hypothetical protein 386 46.16 0 472691..473485 + 264 148652203 - PsycPRwf_0391 - cobyrinic acid a,c-diamide synthase 387 48.76 0 473546..474109 + 187 148652204 - PsycPRwf_0392 - hypothetical protein 388 48.02 0 474310..476964 + 884 148652205 - PsycPRwf_0393 - DNA topoisomerase I 389 45.27 0 477065..478078 - 337 148652206 - PsycPRwf_0394 - hypothetical protein 390 47.57 0 478378..481200 - 940 148652207 - PsycPRwf_0395 - 1A family penicillin-binding protein 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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