version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 202 44.36 0 239796..240212 + 138 148652019 rplS PsycPRwf_0203 - 50S ribosomal protein L19 203 48.98 0 240499..242013 + 504 148652020 - PsycPRwf_0204 - hypothetical protein 204 50.14 +1 242157..244001 + 614 148652021 - PsycPRwf_0205 - excinuclease ABC, C subunit 205 41.82 -1 244034..245140 - 368 148652022 - PsycPRwf_0206 - IS605 family transposase OrfB 206 50.88 +1 245311..246102 - 263 148652023 - PsycPRwf_0207 - hypothetical protein 207 52.85 +2 246171..247502 - 443 148652024 - PsycPRwf_0208 - Beta-ketoacyl synthase-like protein 208 48.66 0 247575..247985 - 136 148652025 - PsycPRwf_0209 - hypothetical protein 209 42.50 -1 248056..248415 - 119 148652026 - PsycPRwf_0210 - hypothetical protein 210 45.65 0 248480..248812 - 110 148652027 - PsycPRwf_0211 - BolA family protein 211 49.50 +1 249034..249837 - 267 148652028 - PsycPRwf_0212 - peptidase M48, Ste24p 212 49.03 0 251656..252891 + 411 148652029 - PsycPRwf_0213 - trimethylamine-N-oxide reductase c-type cytochrome TorC 213 51.53 +1 252948..255470 + 840 148652030 - PsycPRwf_0214 - trimethylamine-N-oxide reductase TorA 214 49.55 +1 255591..256256 + 221 148652031 - PsycPRwf_0215 - cytoplasmic chaperone TorD family protein 215 51.56 +1 256323..257633 + 436 148652032 - PsycPRwf_0216 - molybdenum cofactor synthesis domain-containing protein 216 48.02 0 257966..259279 + 437 148652033 moaA PsycPRwf_0217 - molybdenum cofactor biosynthesis protein A 217 48.48 0 259365..259892 + 175 148652034 - PsycPRwf_0218 - molybdenum cofactor biosynthesis protein B 218 50.31 +1 259897..260715 + 272 148652035 - PsycPRwf_0219 - molybdopterin-guanine dinucleotide biosynthesis protein A-like protein 219 49.21 0 260928..261494 + 188 148652036 - PsycPRwf_0220 - molybdenum cofactor biosynthesis protein C 220 45.27 0 261699..261941 + 80 148652037 - PsycPRwf_0221 - molybdopterin converting factor, subunit 1 221 47.29 0 261973..262488 + 171 148652038 - PsycPRwf_0222 - molybdopterin biosynthesis MoaE protein 222 50.07 +1 262616..263374 - 252 148652039 - PsycPRwf_0223 - molybdate ABC transporter, inner membrane subunit 223 49.08 0 263587..264513 - 308 148652040 - PsycPRwf_0224 - molybdenum ABC transporter, periplasmic molybdate-binding protein 224 47.37 0 264720..265916 - 398 148652041 - PsycPRwf_0225 - aromatic amino acid aminotransferase 225 47.74 0 266107..267591 + 494 148652042 - PsycPRwf_0226 - Na+/H+ antiporter NhaC 226 45.08 0 267648..268703 + 351 148652043 - PsycPRwf_0227 - UDP-glucose 4-epimerase 227 45.11 0 268787..270280 - 497 148652044 - PsycPRwf_0228 - hypothetical protein 228 38.07 -2 270520..272040 - 506 148652045 - PsycPRwf_0229 - NAD-dependent epimerase/dehydratase 229 34.22 -2 272116..273240 - 374 148652046 - PsycPRwf_0230 - glycosyl transferase, group 1 230 33.95 -2 273465..274601 - 378 148652047 - PsycPRwf_0231 - glycosyl transferase, group 1 231 38.10 -2 275575..275700 - 41 148652048 - PsycPRwf_0233 - hypothetical protein 232 46.26 0 275990..276577 - 195 148652049 - PsycPRwf_0234 - integrase catalytic subunit 233 44.23 0 276694..277005 - 103 148652050 - PsycPRwf_0235 - transposase IS3/IS911 family protein 234 32.20 -2 277178..278323 - 381 148652051 - PsycPRwf_0236 - hypothetical protein 235 39.70 -1 279538..279804 - 88 148652052 - PsycPRwf_0240 - transposase IS3/IS911 family protein 236 36.90 -2 279954..281918 - 654 148652053 - PsycPRwf_0241 - asparagine synthase (glutamine-hydrolyzing) 237 32.38 -2 281928..282974 - 348 148652054 - PsycPRwf_0242 - glycosyl transferase, group 1 238 35.59 -2 283023..284441 - 472 148652055 - PsycPRwf_0243 - polysaccharide biosynthesis protein 239 33.67 -2 284432..285613 - 393 148652056 - PsycPRwf_0244 - glycosyl transferase, group 1 240 42.64 0 285617..286690 - 357 148652057 - PsycPRwf_0245 - DegT/DnrJ/EryC1/StrS aminotransferase 241 40.89 -1 286731..287312 - 193 148652058 - PsycPRwf_0246 - hexapaptide repeat-containing transferase 242 36.99 -2 287330..288286 - 318 148652059 - PsycPRwf_0247 - oxidoreductase domain-containing protein 243 44.57 0 288338..289360 - 340 148652060 - PsycPRwf_0248 - NAD-dependent epimerase/dehydratase 244 40.79 -1 289427..290713 - 428 148652061 - PsycPRwf_0249 - UDP-glucose/GDP-mannose dehydrogenase 245 41.79 -1 290754..292751 - 665 148652062 - PsycPRwf_0250 - polysaccharide biosynthesis protein CapD 246 39.10 -2 292810..295065 - 751 148652063 - PsycPRwf_0251 - non-specific protein-tyrosine kinase 247 41.20 -1 295143..295574 - 143 148652064 - PsycPRwf_0252 - protein tyrosine phosphatase 248 43.48 0 295631..296734 - 367 148652065 - PsycPRwf_0253 - polysaccharide export protein 249 45.36 0 296953..299181 - 742 148652066 - PsycPRwf_0254 - UvrD/REP helicase 250 49.74 +1 299255..300424 - 389 148652067 - PsycPRwf_0255 - alpha/beta hydrolase fold 251 51.21 +1 300465..301583 - 372 148652068 - PsycPRwf_0256 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 252 52.35 +1 301786..303105 - 439 148652069 - PsycPRwf_0257 - recombination factor protein RarA 253 48.13 0 303521..304216 + 231 148652070 - PsycPRwf_0258 - hypothetical protein 254 51.91 +1 304213..305208 + 331 148652071 - PsycPRwf_0259 - hypothetical protein 255 45.04 0 305422..306702 - 426 148652072 - PsycPRwf_0260 - citrate synthase I 256 42.33 -1 308231..308608 + 125 148652073 - PsycPRwf_0261 - succinate dehydrogenase, cytochrome b556 subunit 257 46.35 0 308608..308991 + 127 148652074 - PsycPRwf_0262 - succinate dehydrogenase, hydrophobic membrane anchor 258 46.79 0 309198..311048 + 616 148652075 sdhA PsycPRwf_0263 - succinate dehydrogenase flavoprotein subunit 259 45.99 0 311177..311887 + 236 148652076 sdhB PsycPRwf_0264 - succinate dehydrogenase iron-sulfur subunit 260 39.74 -1 312460..313161 - 233 148652077 - PsycPRwf_0265 - IS1 transposase 261 47.58 0 313445..316321 + 958 148652078 kgd PsycPRwf_0266 - alpha-ketoglutarate decarboxylase 262 47.64 0 316529..317758 + 409 148652079 - PsycPRwf_0267 - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 263 46.78 0 317980..319437 + 485 148652080 - PsycPRwf_0268 - dihydrolipoamide dehydrogenase 264 44.19 0 319653..320822 + 389 148652081 sucC PsycPRwf_0269 - succinyl-CoA synthetase subunit beta 265 46.80 0 320880..321755 + 291 148652082 - PsycPRwf_0270 - succinyl-CoA synthetase, alpha subunit 266 47.33 0 321963..322841 + 292 148652083 - PsycPRwf_0271 - nucleotidyl transferase 267 49.65 +1 322978..324669 + 563 148652084 - PsycPRwf_0272 - glucose-6-phosphate isomerase 268 48.99 0 324762..326102 + 446 148652085 - PsycPRwf_0273 - UDP-glucose/GDP-mannose dehydrogenase, dimerisation 269 48.43 0 326234..327697 - 487 148652086 - PsycPRwf_0274 - phosphomannomutase 270 47.28 0 327789..329057 - 422 148652087 - PsycPRwf_0275 - UDP-glucose/GDP-mannose dehydrogenase, dimerisation 271 49.08 0 329219..330088 + 289 148652088 mazG PsycPRwf_0276 - nucleoside triphosphate pyrophosphohydrolase 272 49.08 0 330054..330434 + 126 148652089 - PsycPRwf_0277 - helix-hairpin-helix repeat-containing competence protein ComEA 273 46.89 0 330478..331008 - 176 148652090 - PsycPRwf_0278 - hypothetical protein 274 49.65 +1 331231..333099 - 622 148652091 - PsycPRwf_0279 - Na+/solute symporter 275 44.06 0 333104..333364 - 86 148652092 - PsycPRwf_0280 - membrane protein-like protein 276 46.72 0 333983..335491 + 502 148652093 - PsycPRwf_0281 - amino acid carrier protein 277 49.52 +1 335602..337269 - 555 148652094 - PsycPRwf_0282 - electron-transferring-flavoprotein dehydrogenase 278 47.31 0 337754..338404 + 216 148652095 - PsycPRwf_0283 - hypothetical protein 279 51.52 +1 338477..339499 + 340 148652096 - PsycPRwf_0284 - glutamate racemase 280 47.08 0 339673..339963 + 96 148652097 - PsycPRwf_0285 - hypothetical protein 281 50.60 +1 340063..341487 - 474 148652098 - PsycPRwf_0286 - lytic murein transglycosylase 282 48.65 0 341796..342761 - 321 148652099 - PsycPRwf_0287 - aldose 1-epimerase 283 48.05 0 342832..343524 - 230 148652100 - PsycPRwf_0288 - thiopurine S-methyltransferase 284 44.32 0 343681..344208 - 175 148652101 - PsycPRwf_0289 - peptide methionine sulfoxide reductase 285 47.76 0 344360..345184 + 274 148652102 - PsycPRwf_0290 - putative methyltransferase 286 47.65 0 345273..346334 + 353 148652103 - PsycPRwf_0291 - putative methyltransferase 287 47.57 0 346462..347634 + 390 148652104 - PsycPRwf_0292 - hypothetical protein 288 45.02 0 347669..347899 - 76 148652105 - PsycPRwf_0293 - hypothetical protein 289 46.67 0 348184..350013 + 609 148652106 argS PsycPRwf_0294 - arginyl-tRNA synthetase 290 48.79 0 350161..350988 + 275 148652107 - PsycPRwf_0295 - sporulation domain-containing protein 291 48.48 0 351076..351834 + 252 148652108 - PsycPRwf_0296 - transcriptional regulator IclR-like protein 292 49.68 +1 351928..352857 - 309 148652109 - PsycPRwf_0297 - 3-hydroxyisobutyrate dehydrogenase 293 50.16 +1 352971..354254 - 427 148652110 - PsycPRwf_0298 - enoyl-CoA hydratase/isomerase 294 49.43 +1 354304..355086 - 260 148652111 - PsycPRwf_0299 - enoyl-CoA hydratase 295 49.70 +1 355277..356443 - 388 148652112 - PsycPRwf_0300 - acyl-CoA dehydrogenase domain-containing protein 296 49.53 +1 356685..358172 - 495 148652113 - PsycPRwf_0301 - methylmalonate-semialdehyde dehydrogenase 297 51.71 +1 358463..360475 - 670 148652114 - PsycPRwf_0302 - propionyl-CoA synthetase 298 48.64 0 360701..361909 - 402 148652115 - PsycPRwf_0303 - major facilitator transporter 299 47.31 0 362108..363037 - 309 148652116 - PsycPRwf_0304 - short-chain dehydrogenase/reductase SDR 300 45.23 0 363423..364700 - 425 148652117 clpX PsycPRwf_0305 - ATP-dependent protease ATP-binding subunit 301 47.72 0 364905..365627 - 240 148652118 - PsycPRwf_0306 - ATP-dependent Clp protease, proteolytic subunit ClpP 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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