version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1882 47.69 0 2362779..2363927 - 382 148653699 - PsycPRwf_1902 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1883 44.68 0 2364035..2364880 - 281 148653700 - PsycPRwf_1903 - hypothetical protein 1884 49.57 +1 2364985..2365803 - 272 148653701 - PsycPRwf_1904 - type IV pilus biogenesis/stability protein PilW 1885 49.17 0 2366004..2367215 - 403 148653702 - PsycPRwf_1905 - radical SAM protein 1886 46.06 0 2367514..2367945 - 143 148653703 - PsycPRwf_1906 - nucleoside-diphosphate kinase 1887 46.62 0 2368742..2370487 + 581 148653704 - PsycPRwf_1907 - ferredoxin-dependent glutamate synthase 1888 45.91 0 2370508..2371437 + 309 148653705 - PsycPRwf_1908 - periplasmic protein-like protein 1889 46.89 0 2371635..2372726 + 363 148653706 - PsycPRwf_1909 - translation-associated GTPase 1890 48.54 0 2372963..2373580 + 205 148653707 - PsycPRwf_1910 - hypothetical protein 1891 49.07 0 2373732..2375237 + 501 148653708 - PsycPRwf_1911 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1892 45.06 0 2375362..2376069 + 235 148653709 - PsycPRwf_1912 - TetR family transcriptional regulator 1893 44.93 0 2376183..2376863 - 226 148653710 - PsycPRwf_1913 - TetR family transcriptional regulator 1894 45.50 0 2376986..2377774 - 262 148653711 - PsycPRwf_1914 - TatD family hydrolase 1895 48.23 0 2377927..2378718 - 263 148653712 - PsycPRwf_1915 - hypothetical protein 1896 43.15 0 2379202..2379975 + 257 148653713 - PsycPRwf_1916 - oxidoreductase FAD/NAD(P)-binding subunit 1897 41.78 -1 2380428..2381114 + 228 148653714 - PsycPRwf_1917 - hypothetical protein 1898 41.10 -1 2381687..2382793 - 368 148653715 - PsycPRwf_1918 - IS605 family transposase OrfB 1899 50.16 +1 2383299..2385551 + 750 148653716 - PsycPRwf_1919 - choline/carnitine/betaine transporter 1900 37.70 -2 2385636..2388476 - 946 148653717 - PsycPRwf_1920 - type III restriction enzyme, res subunit 1901 38.31 -2 2388473..2388874 - 133 148653718 - PsycPRwf_1921 - NUDIX hydrolase 1902 42.46 -1 2389145..2389648 + 167 148653719 - PsycPRwf_1922 - peptidase 1903 52.43 +1 2389734..2390843 + 369 148653720 - PsycPRwf_1923 - DNA-directed DNA polymerase 1904 47.57 0 2391011..2392183 + 390 148653721 - PsycPRwf_1924 - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase 1905 44.31 0 2392409..2392891 + 160 148653722 - PsycPRwf_1925 - GAF domain-containing protein 1906 42.75 0 2392969..2393106 - 45 148653723 - PsycPRwf_1926 - hypothetical protein 1907 46.61 0 2393370..2394521 - 383 148653724 tgt PsycPRwf_1927 - queuine tRNA-ribosyltransferase 1908 37.88 -2 2394526..2394789 - 87 148653725 - PsycPRwf_1928 - hypothetical protein 1909 48.88 0 2394959..2396077 + 372 148653726 - PsycPRwf_1929 - hypothetical protein 1910 49.00 0 2396154..2397257 + 367 148653727 - PsycPRwf_1930 - asparaginase/glutaminase 1911 53.14 +2 2397325..2398233 + 302 148653728 truA PsycPRwf_1931 - tRNA pseudouridine synthase A 1912 38.67 -2 2398395..2398619 + 74 148653729 - PsycPRwf_1932 - translation initiation factor IF-1 1913 47.45 0 2398792..2400045 - 417 148653730 - PsycPRwf_1933 - ErfK/YbiS/YcfS/YnhG family protein 1914 48.73 0 2400278..2401381 - 367 148653731 - PsycPRwf_1934 - 3-isopropylmalate dehydrogenase 1915 45.01 0 2401468..2402118 - 216 148653732 leuD PsycPRwf_1935 - isopropylmalate isomerase small subunit 1916 49.27 0 2402175..2403611 - 478 148653733 - PsycPRwf_1936 - isopropylmalate isomerase large subunit 1917 46.46 0 2403943..2404818 + 291 148653734 - PsycPRwf_1937 - LysR family transcriptional regulator 1918 39.74 -1 2405289..2405990 - 233 148653735 - PsycPRwf_1938 - IS1 transposase 1919 46.56 0 2406062..2407558 + 498 148653736 - PsycPRwf_1939 - sodium/proline symporter 1920 43.11 0 2407654..2409207 - 517 148653737 - PsycPRwf_1940 - hypothetical protein 1921 42.76 0 2409534..2412356 - 940 148653738 - PsycPRwf_1941 - hypothetical protein 1922 46.86 0 2412569..2422246 - 3225 148653739 - PsycPRwf_1942 - hypothetical protein 1923 41.38 -1 2422465..2422725 + 86 148653740 - PsycPRwf_1943 - transposase IS3/IS911 family protein 1924 41.84 -1 2422812..2423540 + 242 148653741 - PsycPRwf_1944 - integrase catalytic subunit 1925 43.56 0 2423577..2424026 - 149 148653742 - PsycPRwf_1945 - hypothetical protein 1926 42.62 0 2424243..2425718 - 491 148653743 - PsycPRwf_1946 - hypothetical protein 1927 40.91 -1 2426040..2427584 - 514 148653744 - PsycPRwf_1947 - long-chain fatty acid ABC transporter 1928 43.40 0 2427880..2429439 - 519 148653745 - PsycPRwf_1948 - membrane protein involved in aromatic hydrocarbon degradation 1929 46.43 0 2429816..2430067 - 83 148653746 - PsycPRwf_1949 - hypothetical protein 1930 47.09 0 2430235..2432196 + 653 148653747 - PsycPRwf_1950 - ABC transporter related 1931 47.15 0 2432315..2433436 + 373 148653748 - PsycPRwf_1951 - lipid A biosynthesis acyltransferase 1932 42.86 0 2433528..2435396 - 622 148653749 - PsycPRwf_1952 - triacylglycerol lipase 1933 45.54 0 2435897..2436994 + 365 148653750 - PsycPRwf_1953 - tryptophanyl-tRNA synthetase 1934 46.20 0 2437007..2437954 + 315 148653751 - PsycPRwf_1954 - chromosome segregation and condensation protein ScpA 1935 47.12 0 2438028..2438687 + 219 148653752 - PsycPRwf_1955 - putative transcriptional regulator 1936 43.85 0 2438825..2439832 + 335 148653753 - PsycPRwf_1956 - alpha/beta hydrolase fold 1937 48.94 0 2440031..2441068 + 345 148653754 - PsycPRwf_1957 - RNA-binding S4 domain-containing protein 1938 49.55 +1 2441246..2441806 - 186 148653755 - PsycPRwf_1958 - hypothetical protein 1939 43.99 0 2441883..2442473 - 196 148653756 - PsycPRwf_1959 - hypothetical protein 1940 45.45 0 2442694..2443287 + 197 148653757 - PsycPRwf_1960 - lysine exporter protein LysE/YggA 1941 45.02 0 2443478..2444119 - 213 148653758 - PsycPRwf_1961 - multiple antibiotic resistance (MarC)-related protein 1942 50.61 +1 2444355..2445251 - 298 148653759 - PsycPRwf_1962 - nicotinate-nucleotide pyrophosphorylase 1943 46.98 0 2445435..2446577 - 380 148653760 - PsycPRwf_1963 - hypothetical protein 1944 49.24 0 2446999..2448186 + 395 148653761 - PsycPRwf_1964 - quinolinate synthetase 1945 52.72 +2 2448297..2450168 + 623 148653762 - PsycPRwf_1965 - L-aspartate oxidase 1946 46.79 0 2450322..2451302 + 326 148653763 - PsycPRwf_1966 - protein of unknown function DUF340, membrane 1947 38.79 -2 2451310..2451951 - 213 148653764 - PsycPRwf_1967 - OmpA/MotB domain-containing protein 1948 51.83 +1 2451952..2453211 - 419 148653765 - PsycPRwf_1968 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 1949 50.66 +1 2453295..2454581 - 428 148653766 - PsycPRwf_1969 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 1950 46.23 0 2455031..2456170 + 379 148653767 - PsycPRwf_1970 - PhoH family protein 1951 46.95 0 2456327..2456884 + 185 148653768 - PsycPRwf_1971 - hypothetical protein 1952 48.67 0 2456988..2458448 + 486 148653769 - PsycPRwf_1972 - lytic murein transglycosylase 1953 42.98 0 2458646..2459578 - 310 148653770 - PsycPRwf_1973 - hypothetical protein 1954 39.77 -1 2459819..2460160 - 113 148653771 - PsycPRwf_1974 - hypothetical protein 1955 46.29 0 2460640..2462028 - 462 148653772 fumC PsycPRwf_1975 - fumarate hydratase 1956 51.38 +1 2462215..2462829 + 204 148653773 - PsycPRwf_1976 - 5-formyltetrahydrofolate cyclo-ligase 1957 49.68 +1 2462839..2463150 + 103 148653774 - PsycPRwf_1977 - hypothetical protein 1958 49.32 +1 2463286..2464680 - 464 148653775 - PsycPRwf_1978 - Na+/H+ antiporter NhaC 1959 48.88 0 2465179..2467758 + 859 148653776 - PsycPRwf_1979 - ATP-dependent protease La 1960 48.91 0 2468004..2468555 + 183 148653777 - PsycPRwf_1980 - superoxide dismutase, copper/zinc binding 1961 46.76 0 2469061..2470110 + 349 148653778 recA PsycPRwf_1981 - recombinase A 1962 47.17 0 2470257..2471492 + 411 148653779 - PsycPRwf_1982 - hypothetical protein 1963 46.50 0 2471533..2472132 - 199 148653780 - PsycPRwf_1983 - GCN5-related N-acetyltransferase 1964 49.32 +1 2472266..2473435 + 389 148653781 - PsycPRwf_1984 - tRNA pseudouridine synthase D, TruD 1965 49.35 +1 2473459..2474388 - 309 148653782 - PsycPRwf_1985 - phosphotransferase domain-containing protein 1966 43.33 0 2474626..2475195 + 189 148653783 - PsycPRwf_1986 - intracellular septation protein A 1967 50.83 +1 2475220..2475522 + 100 148653784 - PsycPRwf_1987 - YciI-like protein 1968 52.73 +2 2475559..2476125 + 188 148653785 - PsycPRwf_1988 - hypothetical protein 1969 48.65 0 2476196..2478415 + 739 148653786 - PsycPRwf_1989 - hypothetical protein 1970 49.57 +1 2478455..2479261 - 268 148653787 - PsycPRwf_1990 - UBA/THIF-type NAD/FAD binding protein 1971 45.79 0 2479369..2480259 - 296 148653788 - PsycPRwf_1991 - TatD-related deoxyribonuclease 1972 51.23 +1 2480585..2481277 - 230 148653789 - PsycPRwf_1992 - single-strand binding protein 1973 47.91 0 2481374..2482738 - 454 148653790 - PsycPRwf_1993 - major facilitator transporter 1974 42.25 -1 2482749..2483006 - 85 148653791 - PsycPRwf_1994 - hypothetical protein 1975 49.68 +1 2483273..2486251 + 992 148653792 - PsycPRwf_1995 - excinuclease ABC, A subunit 1976 31.39 -2 2486375..2488126 + 583 148653793 - PsycPRwf_1996 - hypothetical protein 1977 50.54 +1 2488190..2489293 + 367 148653794 - PsycPRwf_1997 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1978 51.06 +1 2489349..2489630 - 93 148653795 - PsycPRwf_1998 - hypothetical protein 1979 50.24 +1 2489857..2490915 + 352 148653796 - PsycPRwf_1999 - alpha/beta hydrolase domain-containing protein 1980 45.34 0 2491081..2491713 + 210 148653797 - PsycPRwf_2000 - nitroreductase 1981 48.92 0 2491959..2492933 + 324 148653798 - PsycPRwf_2001 - hypothetical protein 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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