version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 143 51.31 +1 171218..171751 - 177 148651960 - PsycPRwf_0143 - Holliday junction resolvase YqgF 144 50.44 +1 171889..172455 - 188 148651961 - PsycPRwf_0144 - hypothetical protein 145 50.00 +1 172579..174390 - 603 148651962 - PsycPRwf_0145 - DNA repair protein RecN 146 45.35 0 175039..175371 + 110 148651963 - PsycPRwf_0146 - hypothetical protein 147 52.42 +1 175574..176359 + 261 148651964 - PsycPRwf_0147 - RNA methyltransferase 148 49.38 +1 176463..177110 - 215 148651965 - PsycPRwf_0148 - dephospho-CoA kinase 149 49.84 +1 177662..178582 - 306 148651966 - PsycPRwf_0149 - peptidase A24A domain-containing protein 150 48.99 0 178666..179898 - 410 148651967 - PsycPRwf_0150 - type II secretion system protein 151 49.64 +1 179959..181221 - 420 148651968 - PsycPRwf_0151 - type II secretion system protein E 152 48.62 0 181557..182354 + 265 148651969 - PsycPRwf_0152 - Triose-phosphate isomerase 153 49.69 +1 182520..182837 + 105 148651970 secG PsycPRwf_0153 - preprotein translocase subunit SecG 154 45.11 0 183800..184300 + 166 148651971 - PsycPRwf_0155 - hypothetical protein 155 43.88 0 184592..186079 + 495 148651972 nusA PsycPRwf_0156 - transcription elongation factor NusA 156 47.50 0 186097..188814 + 905 148651973 infB PsycPRwf_0157 - translation initiation factor IF-2 157 45.86 0 189011..189433 + 140 148651974 - PsycPRwf_0158 - ribosome-binding factor A 158 47.73 0 189456..190490 + 344 148651975 - PsycPRwf_0159 - tRNA pseudouridine synthase B 159 42.61 0 191213..191740 + 175 148651976 - PsycPRwf_0160 - ThiJ/PfpI domain-containing protein 160 42.22 -1 191834..192013 + 59 148651977 - PsycPRwf_0161 - hypothetical protein 161 50.62 +1 192085..192246 + 53 148651978 - PsycPRwf_0162 - hypothetical protein 162 42.70 0 192402..192668 + 88 148651979 rpsO PsycPRwf_0163 - 30S ribosomal protein S15 163 46.24 0 193089..195203 + 704 148651980 - PsycPRwf_0164 - polynucleotide phosphorylase/polyadenylase 164 45.64 0 196042..198876 - 944 148651981 - PsycPRwf_0165 - glycerol-3-phosphate acyltransferase 165 47.99 0 199482..200375 + 297 148651982 - PsycPRwf_0166 - palmitoyl-CoA hydrolase 166 50.82 +1 200529..201866 - 445 148651983 - PsycPRwf_0167 - lytic murein transglycosylase 167 48.94 0 202029..203303 - 424 148651984 - PsycPRwf_0168 - A/G-specific adenine glycosylase 168 47.43 0 203433..204404 - 323 148651985 rbgA PsycPRwf_0169 - ribosomal biogenesis GTPase 169 49.80 +1 204627..205367 - 246 148651986 - PsycPRwf_0170 - dienelactone hydrolase 170 51.15 +1 205637..206113 + 158 148651987 - PsycPRwf_0171 - hypothetical protein 171 46.97 0 206272..207525 - 417 148651988 - PsycPRwf_0172 - Rh family protein/ammonium transporter 172 44.25 0 207634..207972 - 112 148651989 - PsycPRwf_0173 - nitrogen regulatory protein P-II 173 49.48 +1 208359..209219 - 286 148651990 - PsycPRwf_0174 - UspA domain-containing protein 174 48.17 0 209376..210878 - 500 148651991 - PsycPRwf_0175 - sulphate transporter 175 50.00 +1 211558..213015 + 485 148651992 murD PsycPRwf_0176 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 176 47.23 0 213137..214345 + 402 148651993 - PsycPRwf_0177 - cell cycle protein 177 42.01 -1 214403..215509 - 368 148651994 - PsycPRwf_0178 - IS605 family transposase OrfB 178 51.33 +1 215789..216727 - 312 148651995 - PsycPRwf_0179 - glutamate--tRNA ligase 179 43.45 0 216759..217193 - 144 148651996 - PsycPRwf_0180 - TraR/DksA family transcriptional regulator 180 46.43 0 217357..218379 - 340 148651997 - PsycPRwf_0181 - calcineurin phosphoesterase C-terminal domain-containing protein 181 51.32 +1 218419..219213 - 264 148651998 - PsycPRwf_0182 - ABC-3 protein 182 50.24 +1 219327..220154 - 275 148651999 - PsycPRwf_0183 - ABC transporter related 183 48.88 0 220278..220856 - 192 148652000 - PsycPRwf_0184 - ferric uptake regulator family protein 184 49.08 0 221384..222361 + 325 148652001 - PsycPRwf_0185 - periplasmic solute binding protein 185 41.24 -1 222498..222965 + 155 148652002 - PsycPRwf_0186 - hypothetical protein 186 41.06 -1 223321..224187 + 288 148652003 - PsycPRwf_0187 - F0F1 ATP synthase subunit A 187 43.90 0 224222..224467 + 81 148652004 - PsycPRwf_0188 - F0F1 ATP synthase subunit C 188 43.95 0 224572..225042 + 156 148652005 - PsycPRwf_0189 - F0F1 ATP synthase subunit B 189 43.17 0 225257..225886 + 209 148652006 - PsycPRwf_0190 - F0F1 ATP synthase subunit delta 190 44.60 0 226051..227595 + 514 148652007 - PsycPRwf_0191 - F0F1 ATP synthase subunit alpha 191 42.40 -1 227691..228572 + 293 148652008 - PsycPRwf_0192 - F0F1 ATP synthase subunit gamma 192 46.15 0 228611..230038 + 475 148652009 - PsycPRwf_0193 - F0F1 ATP synthase subunit beta 193 45.32 0 230169..230585 + 138 148652010 - PsycPRwf_0194 - ATP synthase F1, epsilon subunit 194 41.19 -1 230778..231884 + 368 148652011 - PsycPRwf_0195 - IS605 family transposase OrfB 195 44.91 0 232013..232729 + 238 148652012 - PsycPRwf_0196 - two component transcriptional regulator 196 41.73 -1 232943..234049 + 368 148652013 - PsycPRwf_0197 - IS605 family transposase OrfB 197 46.51 0 234457..236148 + 563 148652014 - PsycPRwf_0198 - integral membrane sensor signal transduction histidine kinase 198 48.53 0 236205..237665 - 486 148652015 - PsycPRwf_0199 - integral membrane sensor signal transduction histidine kinase 199 44.70 0 237787..238050 + 87 148652016 rpsP PsycPRwf_0200 - 30S ribosomal protein S16 200 45.95 0 238140..238670 + 176 148652017 - PsycPRwf_0201 - 16S rRNA processing protein RimM 201 47.51 0 238761..239522 + 253 148652018 - PsycPRwf_0202 - tRNA (guanine-N1)-methyltransferase 202 44.36 0 239796..240212 + 138 148652019 rplS PsycPRwf_0203 - 50S ribosomal protein L19 203 48.98 0 240499..242013 + 504 148652020 - PsycPRwf_0204 - hypothetical protein 204 50.14 +1 242157..244001 + 614 148652021 - PsycPRwf_0205 - excinuclease ABC, C subunit 205 41.82 -1 244034..245140 - 368 148652022 - PsycPRwf_0206 - IS605 family transposase OrfB 206 50.88 +1 245311..246102 - 263 148652023 - PsycPRwf_0207 - hypothetical protein 207 52.85 +2 246171..247502 - 443 148652024 - PsycPRwf_0208 - Beta-ketoacyl synthase-like protein 208 48.66 0 247575..247985 - 136 148652025 - PsycPRwf_0209 - hypothetical protein 209 42.50 -1 248056..248415 - 119 148652026 - PsycPRwf_0210 - hypothetical protein 210 45.65 0 248480..248812 - 110 148652027 - PsycPRwf_0211 - BolA family protein 211 49.50 +1 249034..249837 - 267 148652028 - PsycPRwf_0212 - peptidase M48, Ste24p 212 49.03 0 251656..252891 + 411 148652029 - PsycPRwf_0213 - trimethylamine-N-oxide reductase c-type cytochrome TorC 213 51.53 +1 252948..255470 + 840 148652030 - PsycPRwf_0214 - trimethylamine-N-oxide reductase TorA 214 49.55 +1 255591..256256 + 221 148652031 - PsycPRwf_0215 - cytoplasmic chaperone TorD family protein 215 51.56 +1 256323..257633 + 436 148652032 - PsycPRwf_0216 - molybdenum cofactor synthesis domain-containing protein 216 48.02 0 257966..259279 + 437 148652033 moaA PsycPRwf_0217 - molybdenum cofactor biosynthesis protein A 217 48.48 0 259365..259892 + 175 148652034 - PsycPRwf_0218 - molybdenum cofactor biosynthesis protein B 218 50.31 +1 259897..260715 + 272 148652035 - PsycPRwf_0219 - molybdopterin-guanine dinucleotide biosynthesis protein A-like protein 219 49.21 0 260928..261494 + 188 148652036 - PsycPRwf_0220 - molybdenum cofactor biosynthesis protein C 220 45.27 0 261699..261941 + 80 148652037 - PsycPRwf_0221 - molybdopterin converting factor, subunit 1 221 47.29 0 261973..262488 + 171 148652038 - PsycPRwf_0222 - molybdopterin biosynthesis MoaE protein 222 50.07 +1 262616..263374 - 252 148652039 - PsycPRwf_0223 - molybdate ABC transporter, inner membrane subunit 223 49.08 0 263587..264513 - 308 148652040 - PsycPRwf_0224 - molybdenum ABC transporter, periplasmic molybdate-binding protein 224 47.37 0 264720..265916 - 398 148652041 - PsycPRwf_0225 - aromatic amino acid aminotransferase 225 47.74 0 266107..267591 + 494 148652042 - PsycPRwf_0226 - Na+/H+ antiporter NhaC 226 45.08 0 267648..268703 + 351 148652043 - PsycPRwf_0227 - UDP-glucose 4-epimerase 227 45.11 0 268787..270280 - 497 148652044 - PsycPRwf_0228 - hypothetical protein 228 38.07 -2 270520..272040 - 506 148652045 - PsycPRwf_0229 - NAD-dependent epimerase/dehydratase 229 34.22 -2 272116..273240 - 374 148652046 - PsycPRwf_0230 - glycosyl transferase, group 1 230 33.95 -2 273465..274601 - 378 148652047 - PsycPRwf_0231 - glycosyl transferase, group 1 231 38.10 -2 275575..275700 - 41 148652048 - PsycPRwf_0233 - hypothetical protein 232 46.26 0 275990..276577 - 195 148652049 - PsycPRwf_0234 - integrase catalytic subunit 233 44.23 0 276694..277005 - 103 148652050 - PsycPRwf_0235 - transposase IS3/IS911 family protein 234 32.20 -2 277178..278323 - 381 148652051 - PsycPRwf_0236 - hypothetical protein 235 39.70 -1 279538..279804 - 88 148652052 - PsycPRwf_0240 - transposase IS3/IS911 family protein 236 36.90 -2 279954..281918 - 654 148652053 - PsycPRwf_0241 - asparagine synthase (glutamine-hydrolyzing) 237 32.38 -2 281928..282974 - 348 148652054 - PsycPRwf_0242 - glycosyl transferase, group 1 238 35.59 -2 283023..284441 - 472 148652055 - PsycPRwf_0243 - polysaccharide biosynthesis protein 239 33.67 -2 284432..285613 - 393 148652056 - PsycPRwf_0244 - glycosyl transferase, group 1 240 42.64 0 285617..286690 - 357 148652057 - PsycPRwf_0245 - DegT/DnrJ/EryC1/StrS aminotransferase 241 40.89 -1 286731..287312 - 193 148652058 - PsycPRwf_0246 - hexapaptide repeat-containing transferase 242 36.99 -2 287330..288286 - 318 148652059 - PsycPRwf_0247 - oxidoreductase domain-containing protein 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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