version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1500 44.70 0 1852029..1852820 + 263 148653317 - PsycPRwf_1517 - hypothetical protein 1501 45.97 0 1853321..1854412 + 363 148653318 - PsycPRwf_1518 - hypothetical protein 1502 43.90 0 1854520..1856553 - 677 148653319 - PsycPRwf_1519 - TonB-dependent heme/hemoglobin receptor family protein 1503 45.35 0 1857063..1859342 + 759 148653320 - PsycPRwf_1520 - nitric oxide reductase large subunit-like protein 1504 45.13 0 1860862..1861641 - 259 148653321 - PsycPRwf_1523 - 2OG-Fe(II) oxygenase 1505 42.77 0 1861839..1864382 - 847 148653322 - PsycPRwf_1524 - TonB-dependent siderophore receptor 1506 39.74 -1 1865037..1865738 + 233 148653323 - PsycPRwf_1525 - IS1 transposase 1507 44.46 0 1865892..1867526 + 544 148653324 - PsycPRwf_1526 - extracellular solute-binding protein 1508 47.98 0 1867737..1868753 + 338 148653325 - PsycPRwf_1527 - nickel-transporting ATPase 1509 49.78 +1 1868850..1869761 + 303 148653326 - PsycPRwf_1528 - binding-protein-dependent transport systems inner membrane component 1510 49.01 0 1869761..1870870 + 369 148653327 - PsycPRwf_1529 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1511 50.78 +1 1870867..1871898 + 343 148653328 dppF PsycPRwf_1530 - dipeptide transporter ATP-binding subunit 1512 45.56 0 1871996..1873435 - 479 148653329 - PsycPRwf_1531 - amino acid permease-associated region 1513 48.33 0 1873550..1874809 - 419 148653330 - PsycPRwf_1532 - 4-aminobutyrate aminotransferase 1514 48.66 0 1874952..1876406 - 484 148653331 - PsycPRwf_1533 - succinic semialdehyde dehydrogenase 1515 48.72 0 1876787..1877566 + 259 148653332 - PsycPRwf_1534 - regulatory protein, IclR 1516 51.65 +1 1877625..1878863 - 412 148653333 - PsycPRwf_1535 - L-carnitine dehydratase/bile acid-inducible protein F 1517 48.04 0 1878993..1880189 - 398 148653334 - PsycPRwf_1536 - acyl-CoA dehydrogenase domain-containing protein 1518 47.78 0 1880460..1881407 + 315 148653335 - PsycPRwf_1537 - regulatory protein, IclR 1519 48.48 0 1881491..1883491 - 666 148653336 - PsycPRwf_1538 - transketolase 1520 48.33 0 1883643..1884929 - 428 148653337 - PsycPRwf_1539 - seryl-tRNA synthetase 1521 44.65 0 1885336..1885998 + 220 148653338 - PsycPRwf_1540 - hypothetical protein 1522 41.19 -1 1886498..1886968 + 156 148653339 - PsycPRwf_1541 - Ferritin, Dps family protein 1523 45.76 0 1887093..1888541 - 482 148653340 - PsycPRwf_1542 - anion transporter 1524 47.60 0 1888886..1889635 + 249 148653341 - PsycPRwf_1543 - AzlC family protein 1525 48.33 0 1889625..1889984 + 119 148653342 - PsycPRwf_1544 - branched-chain amino acid transport 1526 46.07 0 1890237..1891649 + 470 148653343 aspA PsycPRwf_1545 - aspartate ammonia-lyase 1527 49.36 +1 1891753..1892145 + 130 148653344 - PsycPRwf_1546 - hypothetical protein 1528 45.82 0 1892262..1893206 - 314 148653345 - PsycPRwf_1547 - uroporphyrin-III C-methyltransferase 1529 46.69 0 1893334..1896336 - 1000 148653346 - PsycPRwf_1548 - molybdopterin oxidoreductase 1530 46.21 0 1896417..1897892 - 491 148653347 - PsycPRwf_1549 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1531 43.41 0 1897987..1899990 - 667 148653348 - PsycPRwf_1550 - protein kinase 1532 43.38 0 1900380..1901882 - 500 148653349 - PsycPRwf_1551 - major facilitator transporter 1533 43.85 0 1902246..1904888 + 880 148653350 - PsycPRwf_1552 - nitrite reductase (NAD(P)H), large subunit 1534 43.92 0 1904985..1905362 + 125 148653351 - PsycPRwf_1553 - nitrite reductase (NAD(P)H), small subunit 1535 45.33 0 1905482..1907599 - 705 148653352 - PsycPRwf_1554 - excinuclease ABC subunit B 1536 47.84 0 1907801..1908496 - 231 148653353 - PsycPRwf_1555 - hypothetical protein 1537 44.83 0 1908631..1909239 - 202 148653354 - PsycPRwf_1556 - hypothetical protein 1538 46.74 0 1909291..1909857 - 188 148653355 - PsycPRwf_1557 - thioesterase superfamily protein 1539 41.81 -1 1911015..1911356 + 113 148653356 - PsycPRwf_1558 - hypothetical protein 1540 48.62 0 1911917..1913146 - 409 148653357 - PsycPRwf_1559 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 1541 46.31 0 1913252..1915231 - 659 148653358 - PsycPRwf_1560 - AAA ATPase 1542 47.46 0 1915354..1915983 - 209 148653359 - PsycPRwf_1561 - hypothetical protein 1543 46.11 0 1916201..1916959 - 252 148653360 - PsycPRwf_1562 - beta-lactamase domain-containing protein 1544 50.00 +1 1917213..1917902 - 229 148653361 - PsycPRwf_1563 - Delta 1-pyrroline-5-carboxylate dehydrogenase-like protein 1545 49.84 +1 1917978..1921193 - 1071 148653362 - PsycPRwf_1564 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1546 44.83 0 1921624..1922919 - 431 148653363 - PsycPRwf_1565 - xanthine/uracil/vitamin C permease 1547 47.47 0 1923585..1924376 + 263 148653364 - PsycPRwf_1566 - Tol-Pal system, TolQ 1548 47.78 0 1924389..1924838 + 149 148653365 - PsycPRwf_1567 - biopolymer transport protein ExbD/TolR 1549 52.19 +1 1924916..1925806 + 296 148653366 - PsycPRwf_1568 - TonB family protein 1550 48.74 0 1925907..1927256 + 449 148653367 - PsycPRwf_1569 - WD40 domain-containing protein 1551 52.02 +1 1927630..1928271 - 213 148653368 - PsycPRwf_1570 - NADPH-dependent FMN reductase 1552 48.99 0 1928366..1929457 - 363 148653369 - PsycPRwf_1571 - hypothetical protein 1553 49.88 +1 1929617..1930879 - 420 148653370 - PsycPRwf_1572 - RluA family pseudouridine synthase 1554 47.46 0 1931164..1932345 + 393 148653371 - PsycPRwf_1573 - DNA uptake lipoprotein-like protein 1555 48.11 0 1932555..1934672 + 705 148653372 - PsycPRwf_1574 - DNA primase 1556 46.74 0 1935099..1936970 + 623 148653373 - PsycPRwf_1575 - RNA polymerase, sigma 70 subunit, RpoD 1557 41.52 -1 1937168..1937509 + 113 148653374 - PsycPRwf_1576 - hypothetical protein 1558 46.55 0 1938073..1940349 + 758 148653375 - PsycPRwf_1577 - ribonucleotide-diphosphate reductase subunit alpha 1559 43.03 0 1940551..1941684 + 377 148653376 nrdB PsycPRwf_1578 - ribonucleotide-diphosphate reductase subunit beta 1560 44.96 0 1941768..1942025 + 85 148653377 - PsycPRwf_1579 - ferredoxin 1561 48.50 0 1942145..1943476 - 443 148653378 - PsycPRwf_1580 - 2-alkenal reductase 1562 48.45 0 1943786..1944592 + 268 148653379 - PsycPRwf_1581 - hypothetical protein 1563 48.09 0 1945742..1946974 + 410 148653380 - PsycPRwf_1582 - lytic transglycosylase, catalytic 1564 48.52 0 1947065..1950304 - 1079 148653381 - PsycPRwf_1583 - lytic transglycosylase, catalytic 1565 44.92 0 1950440..1950931 - 163 148653382 - PsycPRwf_1584 - hypothetical protein 1566 43.67 0 1951224..1952297 - 357 148653383 - PsycPRwf_1585 - hypothetical protein 1567 43.33 0 1952523..1952822 - 99 148653384 - PsycPRwf_1586 - histone family protein DNA-binding protein 1568 44.05 0 1953206..1954885 - 559 148653385 rpsA PsycPRwf_1587 - 30S ribosomal protein S1 1569 47.93 0 1955135..1955833 - 232 148653386 - PsycPRwf_1588 - cytidylate kinase 1570 50.79 +1 1956224..1956796 - 190 148653387 - PsycPRwf_1589 - CMP/dCMP deaminase, zinc-binding 1571 44.69 0 1956912..1957721 - 269 148653388 - PsycPRwf_1590 - uracil-DNA glycosylase 1572 45.34 0 1957893..1960457 - 854 148653389 - PsycPRwf_1591 - ATP-dependent Clp protease, ATP-binding subunit clpA 1573 33.78 -2 1960567..1960791 + 74 148653390 - PsycPRwf_1592 - hypothetical protein 1574 43.49 0 1960879..1961823 - 314 148653391 - PsycPRwf_1593 - auxin efflux carrier 1575 48.40 0 1961845..1963344 - 499 148653392 - PsycPRwf_1594 - thiamine pyrophosphate binding domain-containing protein 1576 47.74 0 1963927..1965738 + 603 148653393 - PsycPRwf_1595 - pyruvate oxidase 1577 43.97 0 1965922..1966344 - 140 148653394 - PsycPRwf_1596 - ATP-dependent Clp protease adaptor protein ClpS 1578 45.11 0 1966383..1967189 - 268 148653395 - PsycPRwf_1597 - hypothetical protein 1579 47.00 0 1967533..1968600 - 355 148653396 - PsycPRwf_1598 - N-acetyl-gamma-glutamyl-phosphate reductase 1580 46.43 0 1968809..1969915 - 368 148653397 - PsycPRwf_1599 - uroporphyrinogen decarboxylase 1581 46.96 0 1970059..1971276 - 405 148653398 - PsycPRwf_1600 - gamma-glutamyl kinase 1582 49.13 0 1971426..1972634 - 402 148653399 obgE PsycPRwf_1601 - GTPase ObgE 1583 44.49 0 1972957..1974399 - 480 148653400 - PsycPRwf_1602 - glyceraldehyde-3-phosphate dehydrogenase 1584 45.20 0 1974757..1975422 - 221 148653401 - PsycPRwf_1603 - Lipocalin family protein 1585 46.94 0 1975693..1976802 - 369 148653402 - PsycPRwf_1604 - NUDIX hydrolase 1586 44.85 0 1977042..1977206 + 54 148653403 - PsycPRwf_1605 - hypothetical protein 1587 47.24 0 1977335..1982656 - 1773 148653404 - PsycPRwf_1606 - hypothetical protein 1588 48.14 0 1982958..1986299 - 1113 148653405 - PsycPRwf_1607 - surface antigen (D15) 1589 41.36 -1 1986547..1987866 + 439 148653406 - PsycPRwf_1608 - major facilitator transporter 1590 41.15 -1 1988000..1988191 - 63 148653407 - PsycPRwf_1609 - hypothetical protein 1591 47.23 0 1988720..1990360 + 546 148653408 - PsycPRwf_1610 - hypothetical protein 1592 47.79 0 1990599..1993310 + 903 148653409 - PsycPRwf_1611 - alanyl-tRNA synthetase 1593 46.26 0 1993766..1995049 + 427 148653410 - PsycPRwf_1612 - aspartate kinase 1594 42.28 -1 1995520..1995765 + 81 148653411 - PsycPRwf_1613 - carbon storage regulator, CsrA 1595 42.67 0 1995895..1996269 + 124 148653412 - PsycPRwf_1614 - HopJ type III effector protein 1596 41.67 -1 1996663..1997946 + 427 148653413 - PsycPRwf_1615 - transposase, IS4 family protein 1597 48.87 0 1998065..1998373 - 102 148653414 - PsycPRwf_1616 - hypothetical protein 1598 47.21 0 1998422..1999444 - 340 148653415 ppnK PsycPRwf_1617 - inorganic polyphosphate/ATP-NAD kinase 1599 45.54 0 1999978..2000706 + 242 148653416 - PsycPRwf_1618 - hypothetical protein 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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