version 1.0
Psychrobacter sp. PRwf-1, complete genome - 1..2978976 2370 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 100 48.35 0 119163..120527 - 454 148651917 - PsycPRwf_0100 - Na(+)-translocating NADH-quinone reductase subunit A 101 51.54 +1 120917..121696 + 259 148651918 - PsycPRwf_0101 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 102 48.64 0 121869..123482 + 537 148651919 - PsycPRwf_0102 - MscS mechanosensitive ion channel 103 45.83 0 123597..123812 - 71 148651920 - PsycPRwf_0103 - L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein 104 45.09 0 123847..125037 + 396 148651921 - PsycPRwf_0104 - hypothetical protein 105 47.58 0 125180..126169 + 329 148651922 - PsycPRwf_0105 - alcohol dehydrogenase 106 45.85 0 126261..126899 - 212 148651923 - PsycPRwf_0106 - 2OG-Fe(II) oxygenase 107 49.26 0 126926..127873 - 315 148651924 - PsycPRwf_0107 - alpha/beta hydrolase fold 108 49.56 +1 128077..129987 - 636 148651925 - PsycPRwf_0108 - ABC transporter related 109 47.80 0 130474..131358 + 294 148651926 - PsycPRwf_0109 - hypothetical protein 110 48.24 0 131560..132525 - 321 148651927 - PsycPRwf_0110 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 111 36.00 -2 132728..132952 + 74 148651928 - PsycPRwf_0111 - hypothetical protein 112 50.05 +1 133133..136015 + 960 148651929 - PsycPRwf_0112 - ATP-dependent helicase HepA 113 51.71 +1 136158..136625 + 155 148651930 - PsycPRwf_0113 - ybaK/ebsC protein 114 49.60 +1 136691..137065 + 124 148651931 - PsycPRwf_0114 - 5-carboxymethyl-2-hydroxymuconate isomerase-like protein 115 49.28 0 137070..137558 - 162 148651932 - PsycPRwf_0115 - hypothetical protein 116 44.15 0 137725..139545 - 606 148651933 - PsycPRwf_0116 - acyl-CoA dehydrogenase domain-containing protein 117 41.10 -1 139848..140954 - 368 148651934 - PsycPRwf_0117 - IS605 family transposase OrfB 118 47.37 0 141266..142369 + 367 148651935 - PsycPRwf_0118 - hypothetical protein 119 49.27 0 142442..143326 - 294 148651936 - PsycPRwf_0119 - shikimate 5-dehydrogenase 120 47.84 0 143813..144508 + 231 148651937 - PsycPRwf_0120 - hypothetical protein 121 51.58 +1 144592..145572 + 326 148651938 - PsycPRwf_0121 - branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein 122 38.81 -2 145518..145718 - 66 148651939 - PsycPRwf_0122 - hypothetical protein 123 38.83 -2 145859..146422 + 187 148651940 - PsycPRwf_0123 - hypothetical protein 124 41.44 -1 146473..147237 - 254 148651941 - PsycPRwf_0124 - Type II site-specific deoxyribonuclease 125 49.24 0 147359..148540 + 393 148651942 - PsycPRwf_0125 - aminodeoxychorismate lyase 126 50.24 +1 148636..149262 + 208 148651943 - PsycPRwf_0126 - dTMP kinase 127 47.53 0 149406..151688 - 760 148651944 - PsycPRwf_0127 - sodium/hydrogen exchanger 128 51.02 +1 152506..153930 + 474 148651945 - PsycPRwf_0128 - protease Do 129 46.55 0 154567..155451 - 294 148651946 - PsycPRwf_0129 - pirin domain-containing protein 130 44.77 0 155658..156164 + 168 148651947 - PsycPRwf_0130 - hypothetical protein 131 48.48 0 156290..157807 - 505 148651948 gltX PsycPRwf_0131 - glutamyl-tRNA synthetase 132 51.37 +1 158286..159305 + 339 148651949 - PsycPRwf_0132 - S-adenosyl-methyltransferase MraW 133 48.15 0 159459..159917 + 152 148651950 - PsycPRwf_0133 - cell division protein FtsL 134 48.61 0 160003..162012 + 669 148651951 - PsycPRwf_0134 - peptidoglycan glycosyltransferase 135 50.35 +1 162117..163826 + 569 148651952 - PsycPRwf_0135 - UDP-N-acetylmuramyl-tripeptide synthetase 136 50.33 +1 163891..165408 + 505 148651953 - PsycPRwf_0136 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 137 46.26 0 165724..166845 + 373 148651954 - PsycPRwf_0137 - phospho-N-acetylmuramoyl-pentapeptide-transferase 138 49.53 +1 167017..167979 + 320 148651955 - PsycPRwf_0138 - rRNA (guanine-N(1)-)-methyltransferase 139 51.22 +1 168080..169018 - 312 148651956 - PsycPRwf_0139 - tyrosine recombinase XerD 140 47.62 0 169059..169352 - 97 148651957 - PsycPRwf_0140 - SirA family protein 141 42.46 -1 169445..170551 - 368 148651958 - PsycPRwf_0141 - IS605 family transposase OrfB 142 47.31 0 170628..171128 - 166 148651959 - PsycPRwf_0142 - hypothetical protein 143 51.31 +1 171218..171751 - 177 148651960 - PsycPRwf_0143 - Holliday junction resolvase YqgF 144 50.44 +1 171889..172455 - 188 148651961 - PsycPRwf_0144 - hypothetical protein 145 50.00 +1 172579..174390 - 603 148651962 - PsycPRwf_0145 - DNA repair protein RecN 146 45.35 0 175039..175371 + 110 148651963 - PsycPRwf_0146 - hypothetical protein 147 52.42 +1 175574..176359 + 261 148651964 - PsycPRwf_0147 - RNA methyltransferase 148 49.38 +1 176463..177110 - 215 148651965 - PsycPRwf_0148 - dephospho-CoA kinase 149 49.84 +1 177662..178582 - 306 148651966 - PsycPRwf_0149 - peptidase A24A domain-containing protein 150 48.99 0 178666..179898 - 410 148651967 - PsycPRwf_0150 - type II secretion system protein 151 49.64 +1 179959..181221 - 420 148651968 - PsycPRwf_0151 - type II secretion system protein E 152 48.62 0 181557..182354 + 265 148651969 - PsycPRwf_0152 - Triose-phosphate isomerase 153 49.69 +1 182520..182837 + 105 148651970 secG PsycPRwf_0153 - preprotein translocase subunit SecG 154 45.11 0 183800..184300 + 166 148651971 - PsycPRwf_0155 - hypothetical protein 155 43.88 0 184592..186079 + 495 148651972 nusA PsycPRwf_0156 - transcription elongation factor NusA 156 47.50 0 186097..188814 + 905 148651973 infB PsycPRwf_0157 - translation initiation factor IF-2 157 45.86 0 189011..189433 + 140 148651974 - PsycPRwf_0158 - ribosome-binding factor A 158 47.73 0 189456..190490 + 344 148651975 - PsycPRwf_0159 - tRNA pseudouridine synthase B 159 42.61 0 191213..191740 + 175 148651976 - PsycPRwf_0160 - ThiJ/PfpI domain-containing protein 160 42.22 -1 191834..192013 + 59 148651977 - PsycPRwf_0161 - hypothetical protein 161 50.62 +1 192085..192246 + 53 148651978 - PsycPRwf_0162 - hypothetical protein 162 42.70 0 192402..192668 + 88 148651979 rpsO PsycPRwf_0163 - 30S ribosomal protein S15 163 46.24 0 193089..195203 + 704 148651980 - PsycPRwf_0164 - polynucleotide phosphorylase/polyadenylase 164 45.64 0 196042..198876 - 944 148651981 - PsycPRwf_0165 - glycerol-3-phosphate acyltransferase 165 47.99 0 199482..200375 + 297 148651982 - PsycPRwf_0166 - palmitoyl-CoA hydrolase 166 50.82 +1 200529..201866 - 445 148651983 - PsycPRwf_0167 - lytic murein transglycosylase 167 48.94 0 202029..203303 - 424 148651984 - PsycPRwf_0168 - A/G-specific adenine glycosylase 168 47.43 0 203433..204404 - 323 148651985 rbgA PsycPRwf_0169 - ribosomal biogenesis GTPase 169 49.80 +1 204627..205367 - 246 148651986 - PsycPRwf_0170 - dienelactone hydrolase 170 51.15 +1 205637..206113 + 158 148651987 - PsycPRwf_0171 - hypothetical protein 171 46.97 0 206272..207525 - 417 148651988 - PsycPRwf_0172 - Rh family protein/ammonium transporter 172 44.25 0 207634..207972 - 112 148651989 - PsycPRwf_0173 - nitrogen regulatory protein P-II 173 49.48 +1 208359..209219 - 286 148651990 - PsycPRwf_0174 - UspA domain-containing protein 174 48.17 0 209376..210878 - 500 148651991 - PsycPRwf_0175 - sulphate transporter 175 50.00 +1 211558..213015 + 485 148651992 murD PsycPRwf_0176 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 176 47.23 0 213137..214345 + 402 148651993 - PsycPRwf_0177 - cell cycle protein 177 42.01 -1 214403..215509 - 368 148651994 - PsycPRwf_0178 - IS605 family transposase OrfB 178 51.33 +1 215789..216727 - 312 148651995 - PsycPRwf_0179 - glutamate--tRNA ligase 179 43.45 0 216759..217193 - 144 148651996 - PsycPRwf_0180 - TraR/DksA family transcriptional regulator 180 46.43 0 217357..218379 - 340 148651997 - PsycPRwf_0181 - calcineurin phosphoesterase C-terminal domain-containing protein 181 51.32 +1 218419..219213 - 264 148651998 - PsycPRwf_0182 - ABC-3 protein 182 50.24 +1 219327..220154 - 275 148651999 - PsycPRwf_0183 - ABC transporter related 183 48.88 0 220278..220856 - 192 148652000 - PsycPRwf_0184 - ferric uptake regulator family protein 184 49.08 0 221384..222361 + 325 148652001 - PsycPRwf_0185 - periplasmic solute binding protein 185 41.24 -1 222498..222965 + 155 148652002 - PsycPRwf_0186 - hypothetical protein 186 41.06 -1 223321..224187 + 288 148652003 - PsycPRwf_0187 - F0F1 ATP synthase subunit A 187 43.90 0 224222..224467 + 81 148652004 - PsycPRwf_0188 - F0F1 ATP synthase subunit C 188 43.95 0 224572..225042 + 156 148652005 - PsycPRwf_0189 - F0F1 ATP synthase subunit B 189 43.17 0 225257..225886 + 209 148652006 - PsycPRwf_0190 - F0F1 ATP synthase subunit delta 190 44.60 0 226051..227595 + 514 148652007 - PsycPRwf_0191 - F0F1 ATP synthase subunit alpha 191 42.40 -1 227691..228572 + 293 148652008 - PsycPRwf_0192 - F0F1 ATP synthase subunit gamma 192 46.15 0 228611..230038 + 475 148652009 - PsycPRwf_0193 - F0F1 ATP synthase subunit beta 193 45.32 0 230169..230585 + 138 148652010 - PsycPRwf_0194 - ATP synthase F1, epsilon subunit 194 41.19 -1 230778..231884 + 368 148652011 - PsycPRwf_0195 - IS605 family transposase OrfB 195 44.91 0 232013..232729 + 238 148652012 - PsycPRwf_0196 - two component transcriptional regulator 196 41.73 -1 232943..234049 + 368 148652013 - PsycPRwf_0197 - IS605 family transposase OrfB 197 46.51 0 234457..236148 + 563 148652014 - PsycPRwf_0198 - integral membrane sensor signal transduction histidine kinase 198 48.53 0 236205..237665 - 486 148652015 - PsycPRwf_0199 - integral membrane sensor signal transduction histidine kinase 199 44.70 0 237787..238050 + 87 148652016 rpsP PsycPRwf_0200 - 30S ribosomal protein S16 45.93 MEAN 3.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.