version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 48 48.46 -2 55019..55342 + 107 26986793 - PP_0048 - hypothetical protein 49 54.06 -1 56161..57627 - 488 26986794 - PP_0049 - hypothetical protein 50 58.82 0 58777..59184 - 135 26986795 - PP_0050 - hypothetical protein 51 62.34 0 59316..60608 - 430 26986796 - PP_0051 - sigma-54 dependent transcriptional regulator 52 59.77 0 60831..61715 + 294 26986797 - PP_0052 - beta-lactamase domain protein 53 63.04 0 61756..63024 + 422 26986798 - PP_0053 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 54 65.97 +1 62982..63839 + 285 26986799 - PP_0054 - hypothetical protein 55 63.85 0 63828..64715 - 295 26986800 - PP_0055 - LysR family transcriptional regulator 56 62.49 0 64943..66595 + 550 26986801 - PP_0056 - GMC family oxidoreductase 57 59.57 0 66693..68312 + 539 26986802 - PP_0057 - major facilitator family transporter 58 60.31 0 68487..69272 - 261 26986803 - PP_0058 - phospholipid/glycerol acyltransferase 59 62.31 0 69319..69846 - 175 26986804 - PP_0059 - D,D-heptose 1,7-bisphosphate phosphatase 60 64.48 0 69850..71904 - 684 26986805 glyS PP_0060 - glycyl-tRNA synthetase subunit beta 61 60.55 0 71901..72848 - 315 26986806 glyQ PP_0061 - glycyl-tRNA synthetase subunit alpha 62 60.51 0 72932..73483 + 183 26986807 tag PP_0062 - DNA-3-methyladenine glycosylase I 63 62.50 0 73525..74412 + 295 26986808 - PP_0063 - lipid A biosynthesis lauroyl acyltransferase 64 59.68 0 74510..74824 - 104 26986809 - PP_0064 - TPR domain-containing protein 65 61.57 0 74836..76209 - 457 26986810 trkA PP_0065 - potassium transporter peripheral membrane component 66 67.73 +1 76233..77543 - 436 26986811 sun PP_0066 - sun protein 67 65.81 0 77540..78472 - 310 26986812 fmt PP_0067 - methionyl-tRNA formyltransferase 68 60.75 0 78533..79039 - 168 26986813 def PP_0068 - peptide deformylase 69 66.12 +1 79246..80343 + 365 26986814 - PP_0069 - DNA protecting protein DprA 70 65.23 0 80386..80943 + 185 26986815 - PP_0070 - Sua5/YciO/YrdC/YwlC family protein 71 58.87 0 81562..82023 + 153 26986816 - PP_0071 - hypothetical protein 72 63.91 0 82151..83128 - 325 26986817 qor-1 PP_0072 - quinone oxidoreductase 73 63.16 0 83261..84172 + 303 26986818 hemF PP_0073 - coproporphyrinogen III oxidase 74 64.97 0 84198..85022 + 274 26986819 aroE PP_0074 - shikimate 5-dehydrogenase 75 63.92 0 85152..86717 - 521 26986820 - PP_0075 - sulphate transporter 76 59.45 0 86861..87802 - 313 26986821 - PP_0076 - glycine betaine-binding protein, putative 77 63.04 0 87799..89316 - 505 26986822 betC PP_0077 - choline sulfatase 78 52.94 -2 89315..89416 + 33 26986823 - PP_0078 - hypothetical protein 79 62.22 0 89425..90324 + 299 26986824 - PP_0079 - LysR family transcriptional regulator 80 65.05 0 90446..91063 - 205 26986825 - PP_0080 - hypothetical protein 81 61.29 0 91077..91448 + 123 26986826 - PP_0081 - hypothetical protein 82 65.31 0 91569..92378 - 269 26986827 trpA PP_0082 - tryptophan synthase subunit alpha 83 63.14 0 92375..93592 - 405 26986828 trpB PP_0083 - tryptophan synthase subunit beta 84 67.78 +1 93703..94599 + 298 26986829 trpI PP_0084 - LysR family transcriptional regulator 85 57.67 -1 94596..95084 - 162 26986830 - PP_0085 - hypothetical protein 86 53.70 -2 95070..95285 + 71 26986831 - PP_0086 - hypothetical protein 87 60.61 0 95344..95607 + 87 26986832 - PP_0087 - hypothetical protein 88 63.78 0 95679..96683 - 334 26986833 - PP_0088 - luciferase family protein 89 59.86 0 96836..97261 + 141 26986834 osmC PP_0089 - OsmC family protein 90 58.25 0 97274..97570 + 98 26986835 - PP_0090 - hypothetical protein 91 63.04 0 97606..98019 - 137 26986836 - PP_0091 - putative lipoprotein 92 58.70 0 98075..98488 - 137 26986837 - PP_0092 - putative lipoprotein 93 61.60 0 98487..99650 + 387 26986838 - PP_0093 - hypothetical protein 94 60.68 0 99757..100407 - 216 26986839 - PP_0094 - HAD superfamily hydrolase 95 62.30 0 100529..101077 - 182 26986840 - PP_0095 - anhydrase family 3 protein 96 64.33 0 101180..103231 + 683 26986841 prlC PP_0096 - oligopeptidase A 97 61.70 0 103228..103509 + 93 26986842 - PP_0097 - hypothetical protein 98 58.05 0 103528..103701 + 57 26986843 - PP_0098 - hypothetical protein 99 62.23 0 103841..104899 + 352 26986844 - PP_0099 - radical SAM domain protein 100 61.39 0 105206..105925 + 239 26986845 cynT PP_0100 - carbonate dehydratase 101 65.28 0 106133..107650 + 505 26986846 - PP_0101 - sulphate transporter 102 56.23 -1 107786..108676 + 296 26986847 - PP_0102 - hypothetical protein 103 61.44 0 108809..109936 + 375 26986848 - PP_0103 - cytochrome c oxidase, subunit II 104 59.50 0 109980..111569 + 529 26986849 - PP_0104 - cytochrome c oxidase, subunit I 105 63.14 0 111579..112145 + 188 26986850 - PP_0105 - cytochrome C oxidase assembly protein 106 58.67 0 112162..113049 + 295 26986851 - PP_0106 - cytochrome c oxidase, subunit III 107 63.27 0 113072..114073 + 333 26986852 - PP_0107 - hypothetical protein 108 64.78 0 114042..114623 + 193 26986853 - PP_0108 - hypothetical protein 109 65.09 0 114633..115712 + 359 26986854 - PP_0109 - cytochrome oxidase assembly 110 63.09 0 115697..116590 + 297 26986855 cyoE-1 PP_0110 - protoheme IX farnesyltransferase 111 61.45 0 116587..117219 + 210 26986856 - PP_0111 - electron transport protein SCO1/SenC 112 60.18 0 117313..118083 - 256 26986857 - PP_0112 - metal ABC transporter periplasmic-binding protein 113 59.97 0 118148..118819 - 223 26986858 - PP_0113 - ABC transporter, permease protein 114 63.89 0 118819..119826 - 335 26986859 - PP_0114 - ABC transporter ATP-binding protein 115 61.00 0 120054..122189 + 711 26986860 katE PP_0115 - hydroperoxidase II 116 62.85 0 122250..122957 - 235 26986861 - PP_0116 - putative lipoprotein 117 64.11 0 123084..123866 - 260 26986862 znuB PP_0117 - hypothetical protein 118 65.63 0 123859..124632 - 257 26986863 znuC PP_0118 - zinc ABC transporter ATP-binding protein 119 66.42 +1 124629..125036 - 135 26986864 - PP_0119 - FUR family transcriptional regulator 120 62.49 0 125181..126089 + 302 26986865 - PP_0120 - periplasmic solute binding protein 121 64.14 0 126139..127089 - 316 26986866 thrB PP_0121 - homoserine kinase 122 56.60 -1 127159..127446 - 95 26986867 - PP_0122 - hypothetical protein 123 64.08 0 127522..130269 + 915 26986868 polA PP_0123 - DNA polymerase I 124 60.51 0 130640..131272 - 210 26986869 - PP_0124 - GTPase EngB 125 59.41 0 131474..131776 + 100 26986870 - PP_0125 - cytochrome c-type protein 126 62.94 0 131808..132425 + 205 26986871 - PP_0126 - cytochrome c4 127 59.72 0 132577..133209 + 210 26986872 - PP_0127 - DsbA family thiol:disulfide interchange protein 128 62.92 0 133222..134076 + 284 26986873 - PP_0128 - endonuclease/exonuclease/phosphatase 129 62.18 0 134104..136041 + 645 26986874 - PP_0129 - GGDEF domain-containing protein 130 61.47 0 136115..136903 + 262 26986875 - PP_0130 - N-acetylmuramoyl-L-alanine amidase family protein 131 61.63 0 137099..138706 + 535 26986876 - PP_0131 - EAL domain containing protein 132 63.41 0 138721..140502 - 593 26986877 - PP_0132 - multi-sensor signal transduction histidine kinase 133 62.44 0 140499..141845 - 448 26986878 algB PP_0133 - two component, sigma54 specific, transcriptional regulator, Fis family 134 63.75 0 142056..142877 + 273 26986879 - PP_0134 - transport-associated protein 135 53.09 -2 143386..143547 + 53 26986880 - PP_0135 - hypothetical protein 136 63.27 0 143550..144020 + 156 26986881 - PP_0136 - inhibitor of vertebrate lysozyme 137 58.84 0 144766..146094 + 442 26986882 gltP PP_0137 - glutamate/aspartate:proton symporter 138 64.31 0 146242..147471 + 409 26986883 - PP_0138 - nucleoside recognition domain protein 139 63.99 0 147453..148088 - 211 26986884 - PP_0139 - putative lipoprotein 140 62.09 0 148085..149023 - 312 26986885 - PP_0140 - hypothetical protein 141 65.03 0 149027..149818 - 263 26986886 - PP_0141 - ABC transporter ATP-binding protein 142 63.93 0 149815..150948 - 377 26986887 - PP_0142 - hypothetical protein 143 63.55 0 151080..152105 - 341 26986888 - PP_0143 - hypothetical protein 144 63.40 0 152199..153605 - 468 26986889 - PP_0144 - insulinase family metalloprotease 145 62.87 0 153636..155294 - 552 26986890 - PP_0145 - sodium-dependent inorganic phosphate (Pi) transporter 146 57.64 -1 155577..156374 - 265 26986891 - PP_0146 - integral membrane protein TerC 147 62.16 0 156417..157724 - 435 26986892 - PP_0147 - citrate transporter 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.