version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 883 65.37 0 1033962..1035119 + 385 26987628 - PP_0892 - phospholipase family protein 884 64.29 0 1035162..1035749 + 195 26987629 - PP_0893 - intracellular protease, PfpI family 885 60.40 0 1035780..1036178 - 132 26987630 - PP_0894 - hypothetical protein 886 65.14 0 1036294..1036884 + 196 26987631 - PP_0895 - hypothetical protein 887 65.52 0 1036881..1037753 + 290 26987632 - PP_0896 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 888 62.60 0 1037869..1039392 - 507 26987633 - PP_0897 - hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit 889 63.74 0 1039407..1039577 - 56 26987634 - PP_0898 - hypothetical protein 890 65.15 0 1039642..1040562 + 306 26987635 - PP_0899 - hypothetical protein 891 62.00 0 1040604..1041332 - 242 26987636 - PP_0900 - PAP2 family protein 892 63.60 0 1041516..1042199 + 227 26987637 colR PP_0901 - winged helix family two component transcriptional regulator 893 64.36 0 1042156..1043499 + 447 26987638 - PP_0902 - integral membrane sensor signal transduction histidine kinase 894 58.15 0 1043607..1044287 + 226 26987639 - PP_0903 - methyltransferase type 11 895 61.68 0 1044291..1044992 + 233 26987640 - PP_0904 - lipopolysaccharide kinase 896 61.11 0 1044992..1045225 + 77 26987641 - PP_0905 - hypothetical protein 897 61.44 0 1045331..1048375 - 1014 26987642 - PP_0906 - multidrug efflux protein 898 63.88 0 1048377..1049597 - 406 26987643 - PP_0907 - RND efflux membrane fusion protein-related protein 899 65.21 0 1049753..1050850 - 365 26987644 - PP_0908 - hypothetical protein 900 62.72 0 1050853..1051917 - 354 26987645 - PP_0909 - hypothetical protein 901 65.90 +1 1051937..1053364 - 475 26987646 - PP_0910 - hypothetical protein 902 56.85 -1 1053474..1053860 - 128 26987647 - PP_0911 - hypothetical protein 903 60.03 0 1053874..1054461 - 195 26987648 - PP_0912 - hypothetical protein 904 63.89 0 1054498..1055829 - 443 26987649 - PP_0913 - hypothetical protein 905 61.77 0 1055988..1058069 - 693 26987650 - PP_0914 - GGDEF domain-containing protein 906 60.13 0 1058289..1058885 - 198 26987651 sodB PP_0915 - superoxide dismutase 907 66.83 +1 1059152..1059766 - 204 26987652 - PP_0916 - amino acid transporter LysE 908 65.54 0 1059853..1060743 + 296 26987653 - PP_0917 - chromosome replication initiation inhibitor protein 909 62.34 0 1060793..1061785 + 330 26987654 - PP_0918 - NAD-dependent epimerase/dehydratase 910 61.21 0 1062198..1062728 + 176 26987655 - PP_0919 - hypothetical protein 911 64.00 0 1062837..1063886 - 349 26987656 xenB PP_0920 - NADH:flavin oxidoreductase/NADH oxidase 912 58.42 0 1063904..1064206 - 100 26987657 - PP_0921 - ArsR family transcriptional regulator 913 63.25 0 1064357..1064941 + 194 26987658 - PP_0922 - hypothetical protein 914 65.15 0 1065054..1065842 - 262 26987659 - PP_0923 - phospholipid/glycerol acyltransferase 915 63.62 0 1065842..1066597 - 251 26987660 - PP_0924 - hypothetical protein 916 68.24 +1 1066758..1067645 + 295 26987661 - PP_0925 - hypothetical protein 917 62.24 0 1067833..1068780 + 315 26987662 - PP_0926 - auxin efflux carrier 918 61.60 0 1068837..1070198 + 453 26987663 aroP PP_0927 - amino acid ABC transporter permease 919 64.37 0 1070340..1071383 - 347 26987664 - PP_0928 - Na+/Ca+ antiporter, CaCA family 920 65.07 0 1071444..1071818 - 124 26987665 - PP_0929 - rare lipoprotein A 921 61.07 0 1071945..1073390 - 481 26987666 gatB PP_0930 - aspartyl/glutamyl-tRNA amidotransferase subunit B 922 65.43 0 1073402..1074853 - 483 26987667 gatA PP_0931 - aspartyl/glutamyl-tRNA amidotransferase subunit A 923 62.50 0 1074869..1075156 - 95 161378141 gatC PP_0932 - aspartyl/glutamyl-tRNA amidotransferase subunit C 924 61.13 0 1075281..1076399 + 372 26987669 mreB PP_0933 - cell shape determining protein, MreB/Mrl family 925 65.87 0 1076620..1077618 + 332 26987670 mreC PP_0934 - rod shape-determining protein MreC 926 61.18 0 1077615..1078106 + 163 26987671 mreD PP_0935 - rod shape-determining protein MreD 927 63.89 0 1078139..1078750 + 203 26987672 maf PP_0936 - Maf-like protein 928 60.49 0 1078804..1080261 + 485 26987673 cafA PP_0937 - ribonuclease, Rne/Rng family 929 64.70 0 1080344..1084165 + 1273 26987674 - PP_0938 - hypothetical protein 930 65.14 0 1084174..1085025 + 283 26987675 - PP_0939 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 931 64.38 0 1085028..1086467 + 479 26987676 tldD PP_0940 - tldD protein 932 61.88 0 1086525..1087046 - 173 26987677 - PP_0941 - hypothetical protein 933 62.84 0 1087144..1088502 + 452 26987678 pmbA PP_0942 - pmbA protein 934 61.83 0 1088756..1089148 + 130 26987679 fagA PP_0943 - hypothetical protein 935 61.81 0 1089138..1090517 + 459 26987680 fumC PP_0944 - fumarate hydratase 936 62.99 0 1090545..1091006 + 153 26987681 - PP_0945 - hypothetical protein 937 59.56 0 1090987..1091619 + 210 26987682 sodA PP_0946 - superoxide dismutase 938 64.14 0 1091616..1092524 + 302 26987683 - PP_0947 - zinc/iron permease 939 63.37 0 1092552..1092824 - 90 26987684 ptsO PP_0948 - phosphotransferase system, phosphocarrier protein HPr 940 60.94 0 1092843..1093697 - 284 26987685 - PP_0949 - hypothetical protein 941 61.29 0 1093700..1094164 - 154 26987686 ptsN PP_0950 - PTS IIA-like nitrogen-regulatory protein PtsN 942 54.69 -1 1094177..1094485 - 102 26987687 rpoX PP_0951 - sigma 54 modulation protein/ribosomal protein S30EA 943 59.84 0 1094565..1096058 - 497 26987688 rpoN PP_0952 - RNA polymerase factor sigma-54 944 60.88 0 1096234..1096959 - 241 26987689 - PP_0953 - ABC transporter ATP-binding protein 945 59.81 0 1096960..1097484 - 174 26987690 - PP_0954 - hypothetical protein 946 57.59 -1 1097471..1098043 - 190 26987691 - PP_0955 - hypothetical protein 947 63.81 0 1098052..1098576 - 174 26987692 - PP_0956 - YrbI family phosphatase 948 64.00 0 1098589..1099563 - 324 26987693 - PP_0957 - KpsF/GutQ family protein 949 63.33 0 1099812..1100621 + 269 26987694 ttg2A PP_0958 - toluene tolerance ABC efflux transporter, ATP-binding protein 950 61.30 0 1100618..1101418 + 266 26987695 ttg2B PP_0959 - hypothetical protein 951 57.20 -1 1101418..1101903 + 161 26987696 ttg2C PP_0960 - hypothetical protein 952 59.57 0 1101913..1102560 + 215 26987697 ttg2D PP_0961 - toluene tolerance family protein 953 61.72 0 1102557..1102859 + 100 26987698 ttg2E PP_0962 - toluene-tolerance protein 954 55.00 -1 1102977..1103216 + 79 26987699 ttg2F PP_0963 - BolA family protein 955 62.16 0 1103240..1104505 + 421 26987700 murA PP_0964 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 956 61.95 0 1104597..1105232 + 211 26987701 hisG PP_0965 - ATP phosphoribosyltransferase catalytic subunit 957 63.88 0 1105519..1106844 + 441 26987702 hisD PP_0966 - histidinol dehydrogenase 958 62.37 0 1106847..1107893 + 348 26987703 hisC PP_0967 - histidinol-phosphate aminotransferase 959 59.26 0 1108009..1109250 - 413 26987704 - PP_0968 - hypothetical protein 960 64.36 0 1109333..1109983 + 216 26987705 - PP_0969 - GntR family transcriptional regulator 961 64.37 0 1109973..1111277 + 434 26987706 - PP_0970 - cyanate transporter 962 61.01 0 1111387..1111863 + 158 26987707 - PP_0971 - hypothetical protein 963 63.21 0 1111880..1112197 + 105 26987708 - PP_0972 - GIY-YIG nuclease superfamily protein 964 60.52 0 1112145..1113152 - 335 26987709 ndpA PP_0973 - nucleoid-associated protein NdpA 965 49.70 -2 1113202..1113531 + 109 26987710 - PP_0974 - hypothetical protein 966 57.09 -1 1113522..1113803 + 93 26987711 hupN PP_0975 - histone family protein DNA-binding protein 967 63.63 0 1113851..1114804 - 317 26987712 - PP_0976 - putative SAM-dependent methyltransferase 968 62.03 0 1114983..1117829 - 948 26987713 valS PP_0977 - valyl-tRNA synthetase 969 64.21 0 1117913..1118278 - 121 26987714 - PP_0978 - hypothetical protein 970 62.24 0 1118284..1118712 - 142 26987715 holC PP_0979 - DNA polymerase III subunit chi 971 64.52 0 1118763..1120256 - 497 26987716 pepA PP_0980 - leucyl aminopeptidase 972 60.94 0 1120241..1120432 - 63 26987717 - PP_0981 - hypothetical protein 973 64.70 0 1120558..1121673 + 371 26987718 - PP_0982 - permease YjgP/YjgQ family protein 974 62.05 0 1121666..1122727 + 353 26987719 - PP_0983 - permease YjgP/YjgQ family protein 975 60.33 0 1122874..1123362 - 162 26987720 - PP_0984 - RDD domain containing protein 976 51.20 -2 1123452..1123949 - 165 26987721 - PP_0985 - cold-shock domain-contain protein 977 63.10 0 1124019..1125140 - 373 26987722 gcvT-1 PP_0986 - glycine cleavage system T protein 978 65.29 0 1125168..1126544 - 458 26987723 sda-2 PP_0987 - L-serine dehydratase 1 979 65.34 0 1126693..1129548 - 951 26987724 gcvP-1 PP_0988 - glycine dehydrogenase 980 60.16 0 1129560..1129943 - 127 26987725 gcvH PP_0989 - glycine cleavage system protein H 981 61.76 0 1130247..1130633 - 128 26987726 - PP_0990 - DoxX family protein 982 63.31 0 1130707..1131480 - 257 26987727 - PP_0991 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.