version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 794 63.88 0 921841..923025 - 394 26987539 - PP_0803 - HlyD family type I secretion membrane fusion protein 795 66.62 +1 923022..925190 - 722 26987540 - PP_0804 - protein secretion ABC efflux system, permease and ATP-binding protein 796 67.92 +1 925187..926623 - 478 26987541 - PP_0805 - TolC family type I secretion outer membrane protein 797 66.38 +1 926687..945619 - 6310 26987542 - PP_0806 - surface adhesion protein, putative 798 66.67 +1 945810..947366 - 518 26987543 - PP_0807 - anaerobic nitric oxide reductase transcription regulator 799 63.53 0 947522..948700 + 392 26987544 hmpA PP_0808 - nitric oxide dioxygenase 800 62.13 0 949157..949663 + 168 26987545 dsbB PP_0809 - disulfide bond formation protein B 801 52.38 -2 949729..950085 + 118 26987546 cyoups1 PP_0810 - cyoups1 protein 802 56.54 -1 949961..950197 + 78 26987547 cyoups2 PP_0811 - cyoups2 protein 803 56.69 -1 950223..951164 + 313 26987548 cyoA PP_0812 - ubiquinol oxidase subunit 2 804 58.84 0 951168..953186 + 672 26987549 cyoB PP_0813 - cytochrome o ubiquinol oxidase, subunit I 805 57.85 0 953190..953813 + 207 26987550 cyoC PP_0814 - cytochrome o ubiquinol oxidase, subunit III 806 53.45 -2 953813..954145 + 110 26987551 cyoD PP_0815 - cytochrome o ubiquinol oxidase, protein CyoD 807 60.14 0 954157..955044 + 295 26987552 cyoE-2 PP_0816 - protoheme IX farnesyltransferase 808 63.19 0 955357..956565 + 402 26987553 - PP_0817 - aminotransferase 809 60.60 0 956571..957806 + 411 26987554 - PP_0818 - hypothetical protein 810 63.02 0 957968..958351 + 127 26987555 - PP_0819 - hypothetical protein 811 65.78 0 958544..959107 + 187 26987556 - PP_0820 - acetyltransferase 812 62.53 0 959730..960140 + 136 26987557 - PP_0821 - hypothetical protein 813 62.98 0 960266..961378 - 370 26987558 - PP_0822 - tRNA 2-selenouridine synthase 814 66.18 +1 961378..962412 - 344 26987559 selD PP_0823 - selenophosphate synthetase 815 61.75 0 962539..963393 + 284 26987560 - PP_0824 - phosphonate ABC transporter periplasmic phosphonate-binding protein 816 67.04 +1 963390..964199 + 269 26987561 - PP_0825 - phosphate ABC transporter, ATP-binding protein, putative 817 64.98 0 964193..965020 + 275 26987562 - PP_0826 - phosphate ABC transporter, permease protein, putative 818 66.28 +1 965017..965784 + 255 26987563 - PP_0827 - phosphonate ABC transporter inner membrane protein 819 62.14 0 965821..966792 - 323 26987564 - PP_0828 - hypothetical protein 820 52.86 -2 967033..967329 + 98 26987565 - PP_0829 - hypothetical protein 821 61.46 0 967340..967819 - 159 26987566 - PP_0830 - acetyltransferase 822 59.97 0 967987..968718 - 243 26987567 - PP_0831 - hypothetical protein 823 65.90 +1 969086..970135 + 349 26987568 queA PP_0832 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 824 60.39 0 970150..971265 + 371 26987569 tgt PP_0833 - queuine tRNA-ribosyltransferase 825 58.33 0 971308..971643 + 111 26987570 yajC PP_0834 - preprotein translocase subunit YajC 826 61.46 0 971707..973569 + 620 26987571 secD PP_0835 - preprotein translocase subunit SecD 827 59.52 0 973580..974488 + 302 26987572 secF PP_0836 - preprotein translocase subunit SecF 828 58.38 0 974607..975149 + 180 26987573 - PP_0837 - hypothetical protein 829 63.86 0 975318..976136 - 272 26987574 suhB PP_0838 - inositol-phosphate phosphatase 830 62.96 0 976288..977043 + 251 26987575 - PP_0839 - RNA methyltransferase 831 63.36 0 977047..977832 + 261 26987576 cysE PP_0840 - serine O-acetyltransferase 832 63.41 0 978012..978503 + 163 26987577 - PP_0841 - BadM/Rrf2 family transcriptional regulator 833 60.08 0 978549..979763 + 404 26987578 iscS PP_0842 - cysteine desulfurase IscS 834 59.17 0 979810..980196 + 128 26987579 iscU PP_0843 - scaffold protein 835 58.95 0 980225..980548 + 107 26987580 iscA PP_0844 - iron-sulfur cluster assembly protein IscA 836 62.45 0 980557..981078 + 173 26987581 hscB PP_0845 - co-chaperone HscB 837 65.22 0 981122..982984 + 620 26987582 hscA PP_0846 - chaperone protein HscA 838 61.11 0 982988..983329 + 113 26987583 - PP_0847 - ferredoxin, 2Fe-2S type, ISC system 839 55.22 -1 983340..983540 + 66 26987584 - PP_0848 - hypothetical protein 840 56.34 -1 983629..984054 + 141 26987585 ndk PP_0849 - nucleoside-diphosphate kinase 841 59.42 0 984083..985228 + 381 26987586 - PP_0850 - radical SAM enzyme, Cfr family 842 60.81 0 985237..986004 + 255 26987587 pilF PP_0851 - type IV pilus biogenesis/stability protein PilW 843 65.28 0 986001..987008 + 335 26987588 - PP_0852 - Cro/CI family transcriptional regulator 844 62.52 0 987012..988121 + 369 26987589 ispG PP_0853 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 845 63.10 0 988147..989436 + 429 26987590 hisS PP_0854 - histidyl-tRNA synthetase 846 63.08 0 989476..990117 + 213 26987591 - PP_0855 - hypothetical protein 847 63.25 0 990118..991260 + 380 26987592 - PP_0856 - hypothetical protein 848 60.86 0 991377..992840 + 487 26987593 engA PP_0857 - GTP-binding protein EngA 849 62.05 0 992992..994140 + 382 26987594 - PP_0858 - putative aminotransferase 850 63.51 0 994128..994919 + 263 26987595 - PP_0859 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 851 64.55 0 995044..997593 - 849 26987596 - PP_0860 - flavodoxin/nitric oxide synthase 852 62.65 0 997825..1000167 - 780 26987597 - PP_0861 - TonB-dependent siderophore receptor 853 62.70 0 1000338..1001018 + 226 26987598 - PP_0862 - putative hydroxylase 854 65.89 +1 1001022..1001792 + 256 26987599 - PP_0863 - Sel1 domain protein repeat-containing protein 855 59.68 0 1001821..1002936 - 371 26987600 - PP_0864 - ornithine decarboxylase 856 63.79 0 1003492..1003977 + 161 26987601 - PP_0865 - RNA polymerase, sigma-24 subunit, ECF subfamily 857 65.25 0 1003974..1004960 + 328 26987602 - PP_0866 - anti-FecI sigma factor, FecR 858 62.47 0 1005069..1007498 + 809 26987603 - PP_0867 - FecA-like outer membrane receptor 859 60.97 0 1007588..1008745 - 385 26987604 - PP_0868 - glycine betaine/L-proline ABC transporter, ATPase subunit 860 65.29 0 1008742..1009395 - 217 26987605 - PP_0869 - binding-protein-dependent transport systems inner membrane component 861 62.85 0 1009392..1010333 - 313 26987606 - PP_0870 - substrate-binding region of ABC-type glycine betaine transport system 862 64.92 0 1010317..1011060 - 247 26987607 - PP_0871 - binding-protein-dependent transport systems inner membrane component 863 61.49 0 1011587..1013170 + 527 26987608 prfC PP_0872 - peptide chain release factor 3 864 59.54 0 1013301..1014380 - 359 26987609 - PP_0873 - periplasmic polyamine-binding protein, putative 865 61.11 0 1014433..1014774 - 113 26987610 - PP_0874 - hypothetical protein 866 65.83 0 1014808..1016238 - 476 26987611 - PP_0875 - FAD dependent oxidoreductase 867 64.24 0 1016279..1017103 - 274 26987612 - PP_0876 - AraC family transcriptional regulator 868 45.83 -2 1017155..1017250 - 31 26987613 - PP_0877 - hypothetical protein 869 64.19 0 1018090..1019058 - 322 26987614 dppF PP_0878 - dipeptide transporter ATP-binding subunit 870 64.71 0 1019058..1020026 - 322 26987615 dppD PP_0879 - oligopeptide/dipeptide ABC transporter, ATPase subunit 871 65.80 0 1020037..1020963 - 308 26987616 dppC PP_0880 - binding-protein-dependent transport systems inner membrane component 872 63.20 0 1020974..1021984 - 336 26987617 dppB PP_0881 - alkaline phosphatase 873 60.61 0 1022076..1023710 - 544 26987618 dppA PP_0882 - dipeptide ABC transporter, periplasmic dipeptide-binding protein 874 62.46 0 1023765..1025144 - 459 26987619 - PP_0883 - outer membrane porin 875 61.71 0 1025373..1026965 - 530 26987620 - PP_0884 - dipeptide ABC transporter, periplasmic peptide-binding protein 876 59.78 0 1027112..1028737 - 541 26987621 - PP_0885 - dipeptide ABC transporter, periplasmic peptide-binding protein 877 61.65 0 1029118..1029834 - 238 26987622 - PP_0886 - hypothetical protein 878 63.27 0 1029941..1031293 + 450 26987623 - PP_0887 - integral membrane sensor signal transduction histidine kinase 879 63.64 0 1031293..1031853 + 186 26987624 - PP_0888 - two component transcriptional regulator, Fis family 880 66.93 +1 1031905..1033041 + 378 26987625 - PP_0889 - beta-lactamase 881 63.97 0 1033038..1033334 + 98 26987626 - PP_0890 - hypothetical protein 882 61.17 0 1033379..1033960 + 193 26987627 - PP_0891 - YceI family protein 883 65.37 0 1033962..1035119 + 385 26987628 - PP_0892 - phospholipase family protein 884 64.29 0 1035162..1035749 + 195 26987629 - PP_0893 - intracellular protease, PfpI family 885 60.40 0 1035780..1036178 - 132 26987630 - PP_0894 - hypothetical protein 886 65.14 0 1036294..1036884 + 196 26987631 - PP_0895 - hypothetical protein 887 65.52 0 1036881..1037753 + 290 26987632 - PP_0896 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 888 62.60 0 1037869..1039392 - 507 26987633 - PP_0897 - hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit 889 63.74 0 1039407..1039577 - 56 26987634 - PP_0898 - hypothetical protein 890 65.15 0 1039642..1040562 + 306 26987635 - PP_0899 - hypothetical protein 891 62.00 0 1040604..1041332 - 242 26987636 - PP_0900 - PAP2 family protein 892 63.60 0 1041516..1042199 + 227 26987637 colR PP_0901 - winged helix family two component transcriptional regulator 893 64.36 0 1042156..1043499 + 447 26987638 - PP_0902 - integral membrane sensor signal transduction histidine kinase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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