version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4042 58.51 0 4625967..4627499 - 510 26990787 - PP_4091 - ISPpu15, transposase Orf2 4043 55.00 -1 4627518..4627877 - 119 26990788 - PP_4092 - ISPpu15, transposase Orf1 4044 43.42 -2 4629737..4630222 + 161 26990789 - PP_4094 - hypothetical protein 4045 52.54 -2 4631078..4631353 + 91 26990790 - PP_4095 - hypothetical protein 4046 62.18 0 4631657..4632391 + 244 26990791 - PP_4096 - hypothetical protein 4047 64.35 0 4632689..4633249 - 186 26990792 pgsA PP_4097 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4048 62.28 0 4633283..4635106 - 607 26990793 uvrC PP_4098 - excinuclease ABC subunit C 4049 59.31 0 4635113..4635751 - 212 26990794 gacA PP_4099 - DNA-binding response regulator GacA 4050 60.51 0 4635815..4636204 - 129 26990795 - PP_4100 - Cro/CI family transcriptional regulator 4051 61.04 0 4636312..4636755 - 147 26990796 - PP_4101 - acetyltransferase 4052 58.66 0 4636766..4637152 - 128 26990797 - PP_4102 - hypothetical protein 4053 62.83 0 4637281..4638897 + 538 26990798 - PP_4103 - phosphate transporter 4054 61.21 0 4639078..4639773 - 231 26990799 - PP_4104 - glutathione S-transferase family protein 4055 62.45 0 4639861..4640358 - 165 26990800 - PP_4105 - hypothetical protein 4056 61.32 0 4640416..4641798 - 460 26990801 gabP PP_4106 - amino acid ABC transporter permease 4057 64.88 0 4642054..4642950 + 298 26990802 - PP_4107 - LysR family transcriptional regulator 4058 65.87 0 4643130..4644380 + 416 26990803 - PP_4108 - aminotransferase class-III 4059 60.07 0 4644384..4644686 - 100 26990804 - PP_4109 - hypothetical protein 4060 64.95 0 4644755..4645510 - 251 26990805 - PP_4110 - hypothetical protein 4061 61.27 0 4645431..4647542 + 703 26990806 fusA PP_4111 - elongation factor G 4062 63.27 0 4649201..4650910 - 569 26990807 - PP_4113 - hypothetical protein 4063 61.90 0 4650964..4652139 - 391 26990808 - PP_4114 - hypothetical protein 4064 59.83 0 4652226..4653029 + 267 26990809 - PP_4115 - NolW domain protein 4065 63.12 0 4653520..4654845 + 441 26990810 aceA PP_4116 - isocitrate lyase 4066 62.84 0 4654903..4655085 - 60 26990811 - PP_4117 - hypothetical protein 4067 64.22 0 4655103..4655798 + 231 26990812 - PP_4118 - YhhN family protein 4068 59.66 0 4656182..4656595 + 137 26990813 nuoA PP_4119 - NADH dehydrogenase subunit A 4069 59.88 0 4656605..4657282 + 225 26990814 nuoB PP_4120 - NADH dehydrogenase subunit B 4070 61.90 0 4657362..4659143 + 593 26990815 nuoCD PP_4121 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 4071 63.86 0 4659146..4659643 + 165 26990816 nuoE PP_4122 - NADH dehydrogenase subunit E 4072 65.12 0 4659640..4661001 + 453 26990817 nuoF PP_4123 - NADH dehydrogenase I subunit F 4073 65.89 +1 4661134..4663848 + 904 26990818 nuoG PP_4124 - NADH dehydrogenase subunit G 4074 62.00 0 4663845..4664852 + 335 26990819 nuoH PP_4125 - NADH dehydrogenase subunit H 4075 61.38 0 4664864..4665412 + 182 26990820 nuoI PP_4126 - NADH dehydrogenase subunit I 4076 64.47 0 4665423..4665923 + 166 26990821 nuoJ PP_4127 - NADH dehydrogenase subunit J 4077 62.14 0 4665927..4666235 + 102 26990822 nouK PP_4128 - NADH dehydrogenase subunit K 4078 63.75 0 4666232..4668085 + 617 26990823 nuoL PP_4129 - NADH dehydrogenase subunit L 4079 63.01 0 4668126..4669658 + 510 26990824 nuoM PP_4130 - NADH dehydrogenase subunit M 4080 63.47 0 4669666..4671135 + 489 26990825 nuoN PP_4131 - NADH dehydrogenase subunit N 4081 59.47 0 4671226..4671489 - 87 26990826 - PP_4132 - hypothetical protein 4082 56.88 -1 4671669..4672046 + 125 26990827 - PP_4133 - transcriptional regulator-related protein 4083 61.16 0 4672043..4672405 - 120 26990828 - PP_4134 - hypothetical protein 4084 63.22 0 4672398..4672745 - 115 26990829 - PP_4135 - hypothetical protein 4085 57.03 -1 4672757..4673005 - 82 26990830 - PP_4136 - LuxR family transcriptional regulator 4086 64.16 0 4673226..4675298 + 690 26990831 - PP_4137 - outer membrane siderophore receptor, putative 4087 60.78 0 4675402..4675962 - 186 26990832 - PP_4138 - NADPH-dependent FMN reductase 4088 63.01 0 4676119..4676337 + 72 26990833 - PP_4139 - hypothetical protein 4089 64.30 0 4678699..4679457 - 252 26990834 dnaQ PP_4141 - DNA polymerase III subunit epsilon 4090 61.52 0 4679508..4679954 - 148 26990835 rnhA PP_4142 - ribonuclease H 4091 66.42 +1 4679970..4680770 - 266 26990836 - PP_4143 - hypothetical protein 4092 60.64 0 4680829..4681608 + 259 26990837 gloB PP_4144 - hydroxyacylglutathione hydrolase 4093 63.94 0 4681709..4683139 + 476 26990838 mltD PP_4145 - lytic murein transglycosylase D 4094 62.57 0 4683360..4685189 + 609 26990839 - PP_4146 - peptide ABC transporter, periplamic peptide-binding protein 4095 62.58 0 4685186..4687021 + 611 26990840 - PP_4147 - peptide ABC transporter, periplamic peptide-binding protein 4096 62.48 0 4687023..4688096 + 357 26990841 - PP_4148 - binding-protein-dependent transport systems inner membrane component 4097 64.41 0 4688098..4689117 + 339 26990842 - PP_4149 - binding-protein-dependent transport systems inner membrane component 4098 62.87 0 4689119..4690723 + 534 26990843 - PP_4150 - peptide ABC transporter, ATP-binding protein 4099 54.85 -1 4690865..4691338 + 157 26990844 - PP_4151 - excisionase domain-containing protein 4100 53.99 -1 4691335..4691910 + 191 26990845 - PP_4152 - hypothetical protein 4101 60.87 0 4692034..4692240 - 68 26990846 - PP_4153 - hypothetical protein 4102 66.63 +1 4692322..4695054 + 910 26990847 - PP_4154 - hypothetical protein 4103 62.58 0 4695058..4696281 - 407 26990848 - PP_4155 - hypothetical protein 4104 65.67 0 4696372..4697277 + 301 26990849 - PP_4156 - LysR family transcriptional regulator 4105 63.51 0 4697339..4698034 - 231 26990850 kdpE PP_4157 - winged helix family two component transcriptional regulator 4106 67.61 +1 4698031..4700685 - 884 26990851 kdpD PP_4158 - osmosensitive K+ channel signal transduction histidine kinase 4107 66.67 +1 4700835..4701392 - 185 26990852 kdpC PP_4159 - potassium-transporting ATPase subunit C 4108 64.07 0 4703468..4705162 - 564 26990853 kdpA PP_4161 - potassium-transporting ATPase subunit A 4109 64.77 0 4705438..4706490 - 350 26990854 - PP_4162 - hypothetical protein 4110 65.91 +1 4706503..4707297 - 264 26990855 - PP_4163 - hypothetical protein 4111 66.20 +1 4707407..4708261 - 284 26990856 - PP_4164 - alpha/beta fold family hydrolase 4112 63.19 0 4708258..4709121 - 287 26990857 - PP_4165 - hypothetical protein 4113 62.40 0 4709139..4709513 - 124 26990858 - PP_4166 - hypothetical protein 4114 67.32 +1 4709676..4710134 - 152 26990859 sixA PP_4167 - phosphohistidine phosphatase, SixA 4115 65.52 0 4710131..4710478 - 115 26990860 - PP_4168 - hypothetical protein 4116 64.04 0 4710515..4711540 - 341 26990861 gpsA PP_4169 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 4117 57.14 -1 4711599..4711703 - 34 26990862 - PP_4170 - hypothetical protein 4118 63.12 0 4711768..4713882 + 704 26990863 - PP_4171 - hypothetical protein 4119 66.67 +1 4713882..4714772 + 296 26990864 - PP_4172 - hypothetical protein 4120 62.73 0 4714769..4716700 + 643 26990865 - PP_4173 - integral membrane sensor hybrid histidine kinase 4121 60.27 0 4716908..4717423 + 171 26990866 fabA PP_4174 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 4122 62.57 0 4717435..4718655 + 406 26990867 fabB PP_4175 - 3-oxoacyl-(acyl carrier protein) synthase I 4123 61.11 0 4718786..4719793 - 335 26990868 - PP_4176 - amidohydrolase 2 4124 64.40 0 4719893..4720774 + 293 26990869 - PP_4177 - Pirin domain protein 4125 61.02 0 4720869..4721594 - 241 26990870 - PP_4178 - dienelactone hydrolase 4126 60.31 0 4721658..4723562 - 634 26990871 htpG PP_4179 - heat shock protein 90 4127 63.15 0 4723632..4724114 - 160 26990872 - PP_4180 - thioesterase superfamily protein 4128 62.89 0 4724111..4724587 - 158 26990873 - PP_4181 - thioesterase superfamily protein 4129 53.12 -2 4724712..4725095 - 127 26990874 - PP_4182 - hypothetical protein 4130 59.20 0 4725082..4725831 - 249 26990875 - PP_4183 - hypothetical protein 4131 63.55 0 4726067..4727380 - 437 26990876 braZ PP_4184 - branched chain amino acid ABC transporter carrier protein 4132 61.13 0 4727784..4728668 - 294 26990877 sucD PP_4185 - succinyl-CoA synthetase subunit alpha 4133 57.93 0 4728668..4729834 - 388 26990878 sucC PP_4186 - succinyl-CoA synthetase subunit beta 4134 61.59 0 4730006..4731442 - 478 26990879 lpdG PP_4187 - dihydrolipoamide dehydrogenase 4135 62.75 0 4731536..4732759 - 407 26990880 kgdB PP_4188 - dihydrolipoamide acetyltransferase 4136 61.44 0 4732802..4735633 - 943 26990881 kgd PP_4189 - alpha-ketoglutarate decarboxylase 4137 59.72 0 4735880..4736584 - 234 26990882 sdhB PP_4190 - succinate dehydrogenase iron-sulfur subunit 4138 62.83 0 4736596..4738368 - 590 26990883 sdhA PP_4191 - succinate dehydrogenase flavoprotein subunit 4139 58.81 0 4738372..4738740 - 122 26990884 sdhD PP_4192 - succinate dehydrogenase, hydrophobic membrane anchor protein 4140 56.85 -1 4738734..4739120 - 128 26990885 sdhC PP_4193 - succinate dehydrogenase, cytochrome b556 subunit 4141 60.16 0 4739473..4740762 + 429 26990886 gltA PP_4194 - type II citrate synthase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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