version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3621 62.42 0 4150394..4151806 + 470 26990366 - PP_3655 - cytosine/purine/uracil/thiamine/allantoin permease family protein 3622 52.81 -2 4151957..4153219 - 420 26990367 - PP_3656 - aromatic compound-specific porin, putative 3623 54.37 -1 4153380..4154054 - 224 26990368 - PP_3657 - nitrobenzoate reductase, putative 3624 54.84 -1 4154137..4155489 - 450 26990369 - PP_3658 - aromatic compound MFS transporter, putative 3625 54.94 -1 4155761..4157014 - 417 26990370 - PP_3659 - AraC family transcriptional regulator 3626 65.65 0 4156987..4157874 - 295 26990371 - PP_3660 - LysR family transcriptional regulator 3627 64.50 0 4157987..4159048 + 353 26990372 - PP_3661 - hypothetical protein 3628 63.90 0 4159257..4160630 + 457 26990373 - PP_3662 - decarboxylase family protein 3629 60.52 0 4160751..4162052 - 433 26990374 - PP_3663 - GGDEF domain-containing protein 3630 64.79 0 4162129..4163457 - 442 26990375 pssA PP_3664 - phosphatidylserine synthase 3631 63.60 0 4163441..4164646 + 401 26990376 - PP_3665 - AraC family transcriptional regulator 3632 64.42 0 4164763..4166097 - 444 26990377 - PP_3666 - major facilitator transporter 3633 62.46 0 4166260..4167471 - 403 26990378 - PP_3667 - creatinase 3634 62.68 0 4167633..4169888 - 751 26990379 - PP_3668 - catalase/peroxidase HPI 3635 67.11 +1 4170275..4171180 + 301 26990380 - PP_3669 - LysR family transcriptional regulator 3636 63.14 0 4171240..4172118 - 292 26990381 - PP_3670 - hypothetical protein 3637 66.79 +1 4172363..4173187 + 274 26990382 - PP_3671 - aldo/keto reductase family oxidoreductase 3638 61.95 0 4173202..4173774 - 190 26990383 - PP_3672 - hypothetical protein 3639 43.14 -2 4175034..4175186 + 50 26990384 - PP_3675 - hypothetical protein 3640 42.76 -2 4175316..4177427 + 703 26990385 - PP_3676 - hypothetical protein 3641 43.12 -2 4177424..4179610 + 728 26990386 - PP_3677 - hypothetical protein 3642 43.44 -2 4180132..4181595 + 487 26990387 - PP_3678 - hypothetical protein 3643 51.85 -2 4181658..4181981 - 107 26990388 - PP_3679 - hypothetical protein 3644 55.39 -1 4182219..4184222 + 667 26990389 - PP_3680 - hypothetical protein 3645 55.88 -1 4184219..4185877 + 552 26990390 - PP_3681 - helicase, putative 3646 53.59 -2 4185928..4186080 + 50 26990391 - PP_3682 - hypothetical protein 3647 53.22 -2 4186650..4187891 + 413 26990392 - PP_3683 - hypothetical protein 3648 52.00 -2 4188101..4188400 + 99 26990393 - PP_3684 - hypothetical protein 3649 45.36 -2 4189760..4189942 + 60 26990394 - PP_3685 - hypothetical protein 3650 49.71 -2 4191774..4191944 - 56 26990395 - PP_3686 - hypothetical protein 3651 46.64 -2 4194971..4195669 - 232 26990396 - PP_3688 - hypothetical protein 3652 55.26 -1 4198162..4199169 + 335 26990397 - PP_3689 - serine/threonine protein phosphatase, putative 3653 51.40 -2 4199711..4201033 - 440 26990398 - PP_3690 - hypothetical protein 3654 57.31 -1 4201148..4207771 - 2207 26990399 - PP_3691 - DNA helicase-related protein 3655 53.92 -1 4208044..4210719 + 891 26990400 - PP_3692 - hypothetical protein 3656 51.09 -2 4211122..4211487 - 121 26990401 - PP_3693 - transcriptional regulator MvaT, P16 subunit, putative 3657 51.67 -2 4211652..4212611 - 319 26990402 - PP_3694 - hypothetical protein 3658 55.90 -1 4212569..4213720 - 383 26990403 - PP_3695 - hypothetical protein 3659 54.46 -1 4213727..4214947 - 406 26990404 - PP_3696 - hypothetical protein 3660 54.29 -1 4214954..4217038 - 694 26990405 - PP_3697 - hypothetical protein 3661 55.67 -1 4217793..4219292 - 499 26990406 - PP_3698 - hypothetical protein 3662 53.37 -2 4219431..4221137 + 568 26990407 - PP_3699 - hypothetical protein 3663 51.54 -2 4221399..4222628 - 409 26990408 - PP_3700 - hypothetical protein 3664 53.92 -1 4222647..4222850 - 67 26990409 - PP_3701 - hypothetical protein 3665 54.17 -1 4222865..4223032 - 55 26990410 - PP_3702 - hypothetical protein 3666 52.20 -2 4223090..4223884 - 264 26990411 - PP_3703 - hypothetical protein 3667 47.22 -2 4224705..4224920 - 71 26990412 - PP_3704 - hypothetical protein 3668 44.50 -2 4224921..4226093 - 390 26990413 - PP_3705 - hypothetical protein 3669 51.88 -2 4226880..4227839 - 319 26990414 - PP_3706 - hypothetical protein 3670 45.55 -2 4228788..4230203 - 471 26990415 - PP_3707 - hypothetical protein 3671 52.31 -2 4230224..4231261 - 345 26990416 - PP_3708 - hypothetical protein 3672 51.67 -2 4231377..4231736 - 119 26990417 - PP_3709 - hypothetical protein 3673 51.73 -2 4232328..4232789 - 153 26990418 - PP_3710 - hypothetical protein 3674 63.23 0 4233549..4235060 - 503 26990419 - PP_3711 - sensory box protein 3675 64.85 0 4235222..4235716 - 164 26990420 - PP_3712 - hypothetical protein 3676 65.81 0 4235833..4236768 - 311 26990421 catA PP_3713 - catechol 1,2-dioxygenase 3677 61.17 0 4236812..4237102 - 96 26990422 catC PP_3714 - muconolactone isomerase 3678 64.71 0 4237124..4238245 - 373 26990423 catB PP_3715 - muconate and chloromuconate cycloisomerase 3679 65.64 0 4238381..4239253 + 290 26990424 catR PP_3716 - LysR family transcriptional regulator 3680 62.67 0 4239386..4240285 - 299 26990425 - PP_3717 - LuxR family transcriptional regulator 3681 62.35 0 4240282..4241694 - 470 26990426 - PP_3718 - hypothetical protein 3682 62.32 0 4241729..4242832 - 367 26990427 - PP_3719 - periplasmic polyamine-binding protein, putative 3683 63.84 0 4243026..4243733 - 235 26990428 - PP_3720 - ribosyldihydronicotinamide dehydrogenase (quinone) 3684 67.67 +1 4243826..4245016 - 396 26990429 aspC PP_3721 - aspartate aminotransferase 3685 63.58 0 4245041..4246270 - 409 26990430 alr PP_3722 - alanine racemase 3686 66.19 +1 4247906..4250023 - 705 26990431 - PP_3724 - acyl-CoA synthetase, putative 3687 64.43 0 4250041..4251201 - 386 26990432 - PP_3725 - acyl-CoA dehydrogenase domain-containing protein 3688 69.69 +1 4251235..4252029 - 264 26990433 - PP_3726 - enoyl-CoA hydratase/isomerase 3689 62.90 0 4252269..4253675 - 468 26990434 - PP_3727 - amino acid transporter 3690 64.62 0 4253872..4256124 - 750 26990435 - PP_3728 - multi-sensor hybrid histidine kinase 3691 64.37 0 4256121..4256903 - 260 26990436 - PP_3729 - periplasmic amino acid-binding protein-related protein 3692 65.27 0 4256900..4257616 - 238 26990437 - PP_3730 - winged helix family two component transcriptional regulator 3693 66.82 +1 4257690..4258334 - 214 26990438 - PP_3731 - TetR family transcriptional regulator 3694 64.66 0 4258451..4259197 + 248 26990439 - PP_3732 - enoyl-CoA hydratase/isomerase 3695 65.06 0 4259251..4260309 - 352 26990440 - PP_3733 - ABC transporter lipoprotein, putative 3696 66.34 +1 4260299..4262758 - 819 26990441 - PP_3734 - hypothetical protein 3697 67.12 +1 4262758..4263423 - 221 26990442 - PP_3735 - ABC transporter ATP-binding protein 3698 63.20 0 4263705..4264772 + 355 26990443 vanA PP_3736 - Rieske (2Fe-2S) domain protein 3699 64.35 0 4264785..4265735 + 316 26990444 vanB PP_3737 - ferredoxin 3700 63.31 0 4265742..4266455 - 237 26990445 - PP_3738 - GntR family transcriptional regulator 3701 64.80 0 4267958..4269298 - 446 26990446 - PP_3740 - major facilitator family transporter 3702 64.29 0 4269859..4271754 + 631 26990447 mrdA-1 PP_3741 - penicillin-binding protein 2 3703 60.29 0 4271797..4272423 - 208 26990448 - PP_3742 - glutathione S-transferase family protein 3704 65.09 0 4272705..4273022 + 105 26990449 - PP_3743 - hypothetical protein 3705 64.90 0 4273083..4273874 - 263 26990450 glcC PP_3744 - DNA-binding transcriptional regulator GlcC 3706 65.80 0 4274042..4275541 + 499 26990451 glcD PP_3745 - glycolate oxidase subunit GlcD 3707 68.57 +1 4275541..4276593 + 350 26990452 glcE PP_3746 - glycolate oxidase FAD binding subunit 3708 66.02 +1 4276603..4277838 + 411 26990453 glcF PP_3747 - glycolate oxidase iron-sulfur subunit 3709 66.42 +1 4277831..4278229 + 132 26990454 glcG PP_3748 - hypothetical protein 3710 61.05 0 4278192..4278707 + 171 26990455 - PP_3749 - hypothetical protein 3711 67.09 +1 4278799..4280232 + 477 26990456 - PP_3750 - GntR family transcriptional regulator 3712 68.50 +1 4280225..4281421 - 398 26990457 - PP_3751 - major facilitator transporter 3713 66.48 +1 4282139..4283227 - 362 26990458 - PP_3753 - AraC family transcriptional regulator 3714 65.99 +1 4283396..4284580 + 394 26990459 - PP_3754 - beta-ketothiolase 3715 63.72 0 4284594..4285442 + 282 26990460 paaH PP_3755 - 3-hydroxybutyryl-CoA dehydrogenase 3716 63.23 0 4285455..4286036 + 193 26990461 - PP_3756 - TetR family transcriptional regulator 3717 60.05 0 4286085..4286462 - 125 26990462 - PP_3757 - response regulator receiver protein 3718 61.45 0 4286507..4287733 - 408 26990463 - PP_3758 - response regulator receiver sensor signal transduction histidine kinase 3719 66.32 +1 4287727..4288302 - 191 26990464 - PP_3759 - CheB methylesterase 3720 59.85 0 4288299..4289120 - 273 26990465 - PP_3760 - MCP methyltransferase, CheR-type 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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