version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3560 64.44 0 4083855..4084574 + 239 26990305 - PP_3594 - polar amino acid ABC transporter inner membrane subunit 3561 62.31 0 4084571..4085281 + 236 26990306 - PP_3595 - polar amino acid ABC transporter inner membrane subunit 3562 68.51 +1 4085298..4086542 + 414 26990307 - PP_3596 - FAD dependent oxidoreductase 3563 65.64 0 4086565..4087347 + 260 26990308 - PP_3597 - amino acid ABC transporter ATP-binding protein 3564 60.12 0 4087773..4088582 + 269 26990309 - PP_3598 - peptidase C26 3565 63.93 0 4088930..4089841 + 303 26990310 - PP_3599 - 5-dehydro-4-deoxyglucarate dehydratase 3566 60.81 0 4089946..4091310 + 454 26990311 - PP_3600 - d-galactonate transporter 3567 64.74 0 4091388..4092941 + 517 26990312 - PP_3601 - D-galactarate dehydratase, putative 3568 67.93 +1 4093000..4094580 + 526 26990313 - PP_3602 - ketoglutarate semialdehyde dehydrogenase 3569 65.75 0 4094715..4095479 - 254 26990314 - PP_3603 - GntR family transcriptional regulator 3570 61.26 0 4096402..4096734 - 110 26990315 - PP_3604 - hypothetical protein 3571 62.32 0 4096751..4097671 - 306 26990316 - PP_3605 - LysR family transcriptional regulator 3572 65.54 0 4097711..4098685 - 324 26990317 qor-2 PP_3606 - quinone oxidoreductase 3573 64.61 0 4098799..4100013 - 404 26990318 - PP_3607 - hypothetical protein 3574 64.41 0 4100123..4101052 + 309 26990319 - PP_3608 - LysR family transcriptional regulator 3575 63.84 0 4101053..4101583 - 176 26990320 - PP_3609 - hypothetical protein 3576 64.84 0 4101748..4102512 + 254 26990321 - PP_3610 - hypothetical protein 3577 59.11 0 4102660..4103241 - 193 26990322 - PP_3611 - hypothetical protein 3578 60.66 0 4103278..4105590 + 770 26990323 - PP_3612 - TonB-dependent siderophore receptor 3579 63.34 0 4105675..4106967 - 430 26990324 - PP_3613 - L-sorbosone dehydrogenase 3580 62.47 0 4106964..4107392 - 142 26990325 - PP_3614 - hypothetical protein 3581 60.21 0 4107456..4107842 + 128 26990326 - PP_3615 - hypothetical protein 3582 60.62 0 4108175..4111165 + 996 26990327 - PP_3616 - hypothetical protein 3583 53.07 -2 4111168..4112064 + 298 26990328 - PP_3617 - hypothetical protein 3584 53.58 -2 4112214..4113107 + 297 26990329 - PP_3618 - hypothetical protein 3585 51.28 -2 4113353..4114249 + 298 26990330 - PP_3619 - hypothetical protein 3586 60.86 0 4114395..4116581 - 728 26990331 - PP_3620 - hypothetical protein 3587 66.01 +1 4116852..4117307 + 151 26990332 - PP_3621 - (2Fe-2S)-binding domain protein 3588 65.34 0 4117307..4119562 + 751 26990333 - PP_3622 - isoquinoline 1-oxidoreductase, beta subunit, putative 3589 66.22 +1 4119581..4120924 + 447 26990334 - PP_3623 - gluconate 2-dehydrogenase acceptor subunit 3590 61.85 0 4120994..4121782 - 262 26990335 - PP_3624 - hypothetical protein 3591 63.08 0 4121990..4122631 - 213 26990336 - PP_3625 - amino acid transporter LysE 3592 61.19 0 4122682..4122882 - 66 26990337 - PP_3626 - hypothetical protein 3593 61.64 0 4122891..4123208 - 105 26990338 - PP_3627 - hypothetical protein 3594 63.17 0 4123522..4125267 + 581 26990339 - PP_3628 - choline/carnitine/betaine transporter 3595 60.62 0 4125348..4125827 - 159 26990340 - PP_3629 - 3-demethylubiquinone-9 3-methyltransferase 3596 61.90 0 4126013..4127356 - 447 26990341 - PP_3630 - porin, putative 3597 64.36 0 4127628..4128278 + 216 26990342 - PP_3631 - hypothetical protein 3598 68.94 +1 4128345..4129223 - 292 26990343 - PP_3632 - LysR family transcriptional regulator 3599 66.24 +1 4129380..4130321 + 313 26990344 argC PP_3633 - N-acetyl-gamma-glutamyl-phosphate reductase 3600 62.85 0 4130299..4131084 + 261 26990345 - PP_3634 - acetyltransferase 3601 62.96 0 4131196..4131951 - 251 26990346 - PP_3635 - binding-protein-dependent transport systems inner membrane component 3602 62.52 0 4131951..4133156 - 401 26990347 - PP_3636 - sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative 3603 65.94 +1 4133143..4133964 - 273 26990348 - PP_3637 - sulfonate ABC transporter, ATP-binding protein, putative 3604 64.79 0 4133961..4135025 - 354 26990349 - PP_3638 - acyl-CoA dehydrogenase, putative 3605 60.15 0 4135125..4135784 - 219 26990350 - PP_3639 - alkylhydroperoxidase 3606 63.63 0 4135788..4136708 + 306 26990351 - PP_3640 - AraC family transcriptional regulator 3607 60.54 0 4136778..4138181 - 467 26990352 - PP_3641 - cytosine/purine/uracil/thiamine/allantoin permease family protein 3608 52.67 -2 4138275..4138424 + 49 26990353 - PP_3642 - hypothetical protein 3609 62.35 0 4138498..4138983 + 161 26990354 - PP_3643 - oxidoreductase, putative 3610 62.82 0 4139064..4140104 + 346 26990355 - PP_3644 - luciferase family protein 3611 65.07 0 4140989..4141867 + 292 26990356 - PP_3645 - alpha/beta fold family hydrolase 3612 66.13 +1 4141864..4143345 + 493 26990357 - PP_3646 - aldehyde dehydrogenase family protein 3613 64.81 0 4143358..4143843 + 161 26990358 - PP_3647 - oxidoreductase, putative 3614 57.95 0 4143966..4144355 + 129 26990359 - PP_3648 - carboxymuconolactone decarboxylase 3615 63.35 0 4144444..4145196 + 250 26990360 - PP_3649 - GntR family transcriptional regulator 3616 60.11 0 4145199..4145762 + 187 26990361 - PP_3650 - NUDIX hydrolase 3617 63.92 0 4145914..4148097 + 727 26990362 - PP_3651 - GAF sensor hybrid histidine kinase 3618 63.51 0 4148120..4148752 - 210 26990363 - PP_3652 - amino acid transporter LysE 3619 65.85 0 4148819..4149433 - 204 26990364 - PP_3653 - amino acid transporter LysE 3620 59.38 0 4149545..4149997 + 150 26990365 - PP_3654 - AsnC family transcriptional regulator 3621 62.42 0 4150394..4151806 + 470 26990366 - PP_3655 - cytosine/purine/uracil/thiamine/allantoin permease family protein 3622 52.81 -2 4151957..4153219 - 420 26990367 - PP_3656 - aromatic compound-specific porin, putative 3623 54.37 -1 4153380..4154054 - 224 26990368 - PP_3657 - nitrobenzoate reductase, putative 3624 54.84 -1 4154137..4155489 - 450 26990369 - PP_3658 - aromatic compound MFS transporter, putative 3625 54.94 -1 4155761..4157014 - 417 26990370 - PP_3659 - AraC family transcriptional regulator 3626 65.65 0 4156987..4157874 - 295 26990371 - PP_3660 - LysR family transcriptional regulator 3627 64.50 0 4157987..4159048 + 353 26990372 - PP_3661 - hypothetical protein 3628 63.90 0 4159257..4160630 + 457 26990373 - PP_3662 - decarboxylase family protein 3629 60.52 0 4160751..4162052 - 433 26990374 - PP_3663 - GGDEF domain-containing protein 3630 64.79 0 4162129..4163457 - 442 26990375 pssA PP_3664 - phosphatidylserine synthase 3631 63.60 0 4163441..4164646 + 401 26990376 - PP_3665 - AraC family transcriptional regulator 3632 64.42 0 4164763..4166097 - 444 26990377 - PP_3666 - major facilitator transporter 3633 62.46 0 4166260..4167471 - 403 26990378 - PP_3667 - creatinase 3634 62.68 0 4167633..4169888 - 751 26990379 - PP_3668 - catalase/peroxidase HPI 3635 67.11 +1 4170275..4171180 + 301 26990380 - PP_3669 - LysR family transcriptional regulator 3636 63.14 0 4171240..4172118 - 292 26990381 - PP_3670 - hypothetical protein 3637 66.79 +1 4172363..4173187 + 274 26990382 - PP_3671 - aldo/keto reductase family oxidoreductase 3638 61.95 0 4173202..4173774 - 190 26990383 - PP_3672 - hypothetical protein 3639 43.14 -2 4175034..4175186 + 50 26990384 - PP_3675 - hypothetical protein 3640 42.76 -2 4175316..4177427 + 703 26990385 - PP_3676 - hypothetical protein 3641 43.12 -2 4177424..4179610 + 728 26990386 - PP_3677 - hypothetical protein 3642 43.44 -2 4180132..4181595 + 487 26990387 - PP_3678 - hypothetical protein 3643 51.85 -2 4181658..4181981 - 107 26990388 - PP_3679 - hypothetical protein 3644 55.39 -1 4182219..4184222 + 667 26990389 - PP_3680 - hypothetical protein 3645 55.88 -1 4184219..4185877 + 552 26990390 - PP_3681 - helicase, putative 3646 53.59 -2 4185928..4186080 + 50 26990391 - PP_3682 - hypothetical protein 3647 53.22 -2 4186650..4187891 + 413 26990392 - PP_3683 - hypothetical protein 3648 52.00 -2 4188101..4188400 + 99 26990393 - PP_3684 - hypothetical protein 3649 45.36 -2 4189760..4189942 + 60 26990394 - PP_3685 - hypothetical protein 3650 49.71 -2 4191774..4191944 - 56 26990395 - PP_3686 - hypothetical protein 3651 46.64 -2 4194971..4195669 - 232 26990396 - PP_3688 - hypothetical protein 3652 55.26 -1 4198162..4199169 + 335 26990397 - PP_3689 - serine/threonine protein phosphatase, putative 3653 51.40 -2 4199711..4201033 - 440 26990398 - PP_3690 - hypothetical protein 3654 57.31 -1 4201148..4207771 - 2207 26990399 - PP_3691 - DNA helicase-related protein 3655 53.92 -1 4208044..4210719 + 891 26990400 - PP_3692 - hypothetical protein 3656 51.09 -2 4211122..4211487 - 121 26990401 - PP_3693 - transcriptional regulator MvaT, P16 subunit, putative 3657 51.67 -2 4211652..4212611 - 319 26990402 - PP_3694 - hypothetical protein 3658 55.90 -1 4212569..4213720 - 383 26990403 - PP_3695 - hypothetical protein 3659 54.46 -1 4213727..4214947 - 406 26990404 - PP_3696 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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