version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3255 65.81 0 3716278..3717795 - 505 26990000 paaC PP_3282 - 3-hydroxybutyryl-CoA dehydrogenase 3256 65.78 0 3717798..3718589 - 263 26990001 phaB PP_3283 - enoyl-CoA hydratase 3257 65.63 0 3718624..3719397 - 257 26990002 - PP_3284 - enoyl-CoA hydratase-isomerase 3258 66.33 +1 3719744..3720343 + 199 26990003 phaM PP_3285 - phenylacetic acid degradation protein PaaY 3259 59.85 0 3720421..3721344 + 307 26990004 phaN PP_3286 - PaaX family transcriptional regulator 3260 60.65 0 3721403..3722200 - 265 26990005 - PP_3287 - Crp/FNR family transcriptional regulator 3261 59.01 0 3722741..3723667 + 308 26990006 - PP_3288 - universal stress protein 3262 60.11 0 3723697..3724245 - 182 26990007 - PP_3289 - acetyltransferase 3263 62.24 0 3724428..3725354 + 308 26990008 - PP_3290 - universal stress protein 3264 62.94 0 3725345..3726712 + 455 26990009 - PP_3291 - metallo-beta-lactamase family protein 3265 62.79 0 3726785..3727429 + 214 26990010 - PP_3292 - hypothetical protein 3266 57.04 -1 3727489..3727914 - 141 26990011 - PP_3293 - hypothetical protein 3267 61.05 0 3728127..3729017 + 296 26990012 - PP_3294 - universal stress protein 3268 57.71 -1 3729028..3729507 + 159 26990013 - PP_3295 - YeeE/YedE family protein 3269 60.21 0 3729464..3729943 + 159 26990014 - PP_3296 - YeeE/YedE family protein 3270 53.30 -2 3730172..3730702 + 176 26990015 - PP_3297 - hypothetical protein 3271 59.72 0 3731100..3731603 + 167 26990016 - PP_3298 - CinA domain-containing protein 3272 58.40 0 3731774..3733237 - 487 26990017 - PP_3299 - outer membrane lipoprotein 3273 54.80 -1 3733309..3733923 + 204 26990018 - PP_3300 - TetR family transcriptional regulator 3274 61.14 0 3734001..3735104 + 367 26990019 - PP_3301 - RND efflux membrane fusion protein 3275 59.26 0 3735101..3738193 + 1030 26990020 - PP_3302 - RND efflux transporter 3276 62.95 0 3738266..3739558 + 430 161378128 - PP_3303 - 3-oxoacyl-(acyl carrier protein) synthase II 3277 58.11 0 3739555..3740793 + 412 26990022 - PP_3304 - Bcr/CflA family multidrug resistance transporter 3278 49.70 -2 3740946..3741929 - 327 26990023 - PP_3305 - TerC family membrane protein 3279 63.29 0 3742342..3742548 - 68 26990024 - PP_3306 - hypothetical protein 3280 59.06 0 3742698..3743078 + 126 26990025 - PP_3307 - hypothetical protein 3281 62.88 0 3743190..3743717 + 175 26990026 - PP_3308 - oxidoreductase, small subunit, putative 3282 62.48 0 3743714..3744715 + 333 26990027 - PP_3309 - oxidoreductase, molybdopterin-binding subunit 3283 63.46 0 3744712..3746928 + 738 26990028 - PP_3310 - oxidoreductase, large subunit, putative 3284 61.28 0 3747012..3748757 - 581 26990029 - PP_3311 - glutathione-regulated potassium-proton antiporter 3285 62.82 0 3748952..3749341 - 129 26990030 - PP_3312 - heat shock protein, putative 3286 58.87 0 3749482..3749853 - 123 26990031 - PP_3313 - heat shock protein, putative 3287 61.62 0 3749881..3750336 - 151 26990032 - PP_3314 - HSP20 family protein 3288 57.96 0 3750526..3750996 - 156 26990033 - PP_3315 - hypothetical protein 3289 63.87 0 3751057..3753879 - 940 26990034 - PP_3316 - chaperone-associated ATPase, putative 3290 55.56 -1 3753933..3754058 - 41 26990035 - PP_3317 - hypothetical protein 3291 61.32 0 3754045..3754287 - 80 26990036 - PP_3318 - hypothetical protein 3292 55.63 -1 3754557..3756758 + 733 26990037 - PP_3319 - sensory box protein 3293 57.14 -1 3756944..3757111 - 55 26990038 - PP_3320 - hypothetical protein 3294 57.70 -1 3757176..3757688 + 170 26990039 - PP_3321 - hypothetical protein 3295 64.07 0 3757685..3758686 + 333 26990040 hemB-2 PP_3322 - delta-aminolevulinic acid dehydratase 3296 60.78 0 3758733..3759344 + 203 26990041 - PP_3323 - CobW/P47K family protein 3297 63.49 0 3759365..3760339 + 324 26990042 - PP_3324 - putative GTP cyclohydrolase 3298 63.51 0 3760650..3762740 + 696 26990043 - PP_3325 - outer membrane ferric siderophore receptor, putative 3299 62.52 0 3762755..3763477 + 240 26990044 - PP_3326 - hypothetical protein 3300 50.48 -2 3765152..3765565 - 137 26990045 - PP_3328 - ring-cleaving dioxygenase, putative 3301 58.60 0 3766565..3767854 + 429 26990046 - PP_3329 - hypothetical protein 3302 62.87 0 3768411..3770597 + 728 26990047 - PP_3330 - TonB-dependent siderophore receptor 3303 67.40 +1 3770585..3772078 + 497 26990048 - PP_3331 - hypothetical protein 3304 60.48 0 3772385..3772675 + 96 26990049 - PP_3332 - cytochrome c-type protein 3305 63.35 0 3774368..3774970 - 200 26990050 - PP_3335 - hypothetical protein 3306 65.56 0 3775021..3775473 - 150 26990051 - PP_3336 - hypothetical protein 3307 63.64 0 3775577..3775972 - 131 26990052 - PP_3337 - hypothetical protein 3308 62.22 0 3776046..3776315 + 89 26990053 - PP_3338 - ubiquinol oxidase subunit II-related protein 3309 62.25 0 3776458..3776865 + 135 26990054 - PP_3339 - hypothetical protein 3310 61.70 0 3776944..3778995 + 683 26990055 - PP_3340 - TonB-dependent receptor, putative 3311 65.23 0 3779043..3779459 - 138 26990056 - PP_3341 - nickel responsive regulator 3312 65.33 0 3779547..3781121 + 524 26990057 nikA PP_3342 - nickel ABC transporter, periplasmic nickel-binding protein 3313 65.39 0 3781123..3782064 + 313 26990058 nikB PP_3343 - nickel transporter permease NikB 3314 66.90 +1 3782061..3782906 + 281 26990059 nikC PP_3344 - nickel transporter permease NikC 3315 64.33 0 3782907..3783677 + 256 26990060 nikD PP_3345 - nickel transporter ATP-binding protein 3316 66.79 +1 3783674..3784495 + 273 26990061 nikE PP_3346 - nickel transporter ATP-binding protein 3317 60.00 0 3784670..3784804 - 44 26990062 - PP_3347 - hypothetical protein 3318 61.87 0 3784803..3785948 + 381 26990063 - PP_3348 - GGDEF domain-containing protein 3319 66.26 +1 3785964..3787205 - 413 26990064 - PP_3349 - putative 3-hydroxyphenylpropionic transporter MhpT 3320 63.86 0 3787240..3788631 - 463 26990065 - PP_3350 - hypothetical protein 3321 50.00 -2 3788702..3788809 - 35 26990066 - PP_3351 - hypothetical protein 3322 64.98 0 3788893..3790557 + 554 26990067 - PP_3352 - arylsulfatase, putative 3323 66.78 +1 3790704..3791579 + 291 26990068 - PP_3353 - hypothetical protein 3324 67.69 +1 3791560..3793314 - 584 26990069 - PP_3354 - acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative 3325 68.01 +1 3793329..3794519 - 396 26990070 - PP_3355 - beta-ketothiolase 3326 66.05 +1 3794567..3796336 - 589 26990071 fcs PP_3356 - feruloyl-CoA synthase 3327 67.49 +1 3796542..3797990 - 482 26990072 vdh PP_3357 - vanillin dehydrogenase 3328 61.97 0 3798066..3798896 - 276 26990073 ech PP_3358 - p-hydroxycinnamoyl CoA hydratase/lyase 3329 59.87 0 3799094..3799564 + 156 26990074 - PP_3359 - hydroxycinnamic acid degradation regulator, putative 3330 62.76 0 3799663..3800787 + 374 26990075 - PP_3360 - hypothetical protein 3331 62.01 0 3800866..3803913 - 1015 26990076 - PP_3361 - hypothetical protein 3332 60.77 0 3804057..3804497 + 146 26990077 - PP_3362 - AsnC family transcriptional regulator 3333 59.55 0 3804538..3805155 - 205 26990078 - PP_3363 - hypothetical protein 3334 62.93 0 3805382..3807925 + 847 26990079 - PP_3364 - response regulator 3335 62.71 0 3808052..3809695 - 547 26990080 - PP_3365 - acetolactate synthase 3336 62.47 0 3809881..3810762 + 293 26990081 - PP_3366 - LysR family transcriptional regulator 3337 63.48 0 3810747..3811406 - 219 26990082 - PP_3367 - hypothetical protein 3338 64.73 0 3811674..3812858 + 394 26990083 - PP_3368 - major facilitator family transporter 3339 64.44 0 3812921..3813772 + 283 26990084 - PP_3369 - LysR family transcriptional regulator 3340 62.55 0 3813869..3814864 + 331 26990085 - PP_3370 - aldo/keto reductase family oxidoreductase 3341 66.35 +1 3814857..3816116 - 419 26990086 - PP_3371 - integral membrane sensor signal transduction histidine kinase 3342 65.10 0 3816116..3816817 - 233 26990087 cpxR PP_3372 - winged helix family two component transcriptional regulator 3343 61.17 0 3817015..3819378 + 787 26990088 - PP_3373 - surface antigen family protein 3344 62.24 0 3819509..3819892 + 127 26990089 - PP_3374 - hypothetical protein 3345 62.22 0 3819907..3820872 + 321 26990090 endA-2 PP_3375 - deoxyribonuclease I 3346 64.80 0 3820915..3821877 - 320 26990091 kguD PP_3376 - 2-ketogluconate 6-phosphate reductase 3347 63.19 0 3821888..3823180 - 430 26990092 - PP_3377 - major facilitator transporter 3348 66.88 +1 3823236..3824186 - 316 26990093 kguK PP_3378 - PfkB domain protein 3349 65.77 0 3824179..3824958 - 259 26990094 - PP_3379 - xylose isomerase domain protein TIM barrel 3350 65.00 0 3825023..3826042 - 339 26990095 ptxS PP_3380 - transcriptional regulator PtxS 3351 55.38 -1 3826645..3827973 - 442 26990096 - PP_3381 - ISPpu9, transposase 3352 64.11 0 3828332..3829585 - 417 26990097 - PP_3382 - gluconate 2-dehydrogenase acceptor subunit 3353 62.07 0 3829592..3831376 - 594 26990098 - PP_3383 - gluconate 2-dehydrogenase acceptor subunit 3354 62.89 0 3831380..3832120 - 246 26990099 - PP_3384 - gluconate 2-dehydrogenase acceptor subunit 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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