version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3135 61.74 0 3581927..3583285 + 452 26989880 benA PP_3161 - benzoate dioxygenase, alpha subunit 3136 60.70 0 3583282..3583767 + 161 26989881 benB PP_3162 - benzoate dioxygenase, beta subunit 3137 62.81 0 3583840..3584850 + 336 26989882 benC PP_3163 - oxidoreductase FAD/NAD(P)-binding domain protein 3138 67.19 +1 3584985..3585746 + 253 26989883 benD PP_3164 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 3139 62.83 0 3585804..3587132 + 442 26989884 benK PP_3165 - major facilitator transporter 3140 65.46 0 3587162..3588076 + 304 26989885 - PP_3166 - catechol 1,2-dioxygenase 3141 66.75 +1 3588151..3589422 + 423 26989886 benE-2 PP_3167 - benzoate transporter 3142 60.19 0 3589477..3590727 + 416 26989887 benF PP_3168 - benzoate-specific porin 3143 62.22 0 3590802..3591881 + 359 26989888 - PP_3169 - membrane-bound metal-dependent hydrolase 3144 65.24 0 3591950..3592861 + 303 26989889 - PP_3170 - LysR family transcriptional regulator 3145 65.14 0 3592962..3593942 + 326 26989890 - PP_3171 - luciferase family protein 3146 60.13 0 3594018..3595439 - 473 26989891 - PP_3172 - group II intron-encoding maturase 3147 64.66 0 3595905..3597002 - 365 26989892 nemA PP_3173 - N-ethylmaleimide reductase 3148 63.50 0 3597098..3598108 - 336 26989893 - PP_3174 - aldo/keto reductase 3149 64.96 0 3598181..3599701 - 506 26989894 - PP_3175 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3150 63.72 0 3599867..3601189 - 440 26989895 - PP_3176 - major facilitator family transporter 3151 64.36 0 3601281..3602450 + 389 26989896 - PP_3177 - CdaR transcriptional regulator 3152 66.67 +1 3602592..3603731 + 379 26989897 - PP_3178 - glycerate kinase 3153 63.33 0 3603751..3604650 - 299 26989898 - PP_3179 - LysR family transcriptional regulator 3154 63.11 0 3604778..3605818 + 346 26989899 - PP_3180 - SMP-30/gluconolaconase/LRE domain protein 3155 65.62 0 3605808..3606758 - 316 26989900 - PP_3181 - phage integrase family site specific recombinase 3156 63.22 0 3606849..3609113 - 754 26989901 - PP_3182 - GGDEF domain-containing protein 3157 61.18 0 3609246..3610229 - 327 26989902 - PP_3183 - electron transport protein SCO1/SenC 3158 62.72 0 3610285..3613680 - 1131 26989903 - PP_3184 - hypothetical protein 3159 64.04 0 3614125..3614772 + 215 26989904 pet18 PP_3185 - transcriptional activator, TenA family 3160 64.70 0 3614775..3615434 + 219 26989905 - PP_3186 - transcriptional activator, TenA family 3161 64.06 0 3615663..3616928 + 421 26989906 codB PP_3187 - cytosine permease 3162 64.96 0 3616973..3618142 + 389 26989907 - PP_3188 - hypothetical protein 3163 62.16 0 3618147..3619388 + 413 26989908 codA PP_3189 - N-isopropylammelide isopropylaminohydrolase 3164 64.56 0 3619402..3620349 - 315 26989909 - PP_3190 - ornithine cyclodeaminase 3165 62.39 0 3620346..3621398 - 350 26989910 - PP_3191 - hypothetical protein 3166 56.27 -1 3621429..3622034 - 201 26989911 - PP_3192 - hypothetical protein 3167 68.41 +1 3622260..3622718 - 152 26989912 - PP_3193 - hypothetical protein 3168 65.40 0 3622706..3624049 - 447 26989913 - PP_3194 - hypothetical protein 3169 63.18 0 3624222..3625484 - 420 26989914 - PP_3195 - hypothetical protein 3170 61.02 0 3625561..3626499 - 312 26989915 - PP_3196 - nodulation protein d1 3171 66.03 +1 3626776..3627717 + 313 26989916 - PP_3197 - glyoxalase family protein 3172 66.08 +1 3627730..3628068 + 112 26989917 - PP_3198 - ferredoxin, 2Fe-2S 3173 63.82 0 3628208..3629332 + 374 26989918 - PP_3199 - hypothetical protein 3174 62.00 0 3629377..3631089 + 570 26989919 - PP_3200 - hypothetical protein 3175 70.15 +2 3632526..3633587 + 353 26989920 - PP_3201 - BNR domain-containing protein 3176 65.78 0 3633600..3636080 + 826 26989921 - PP_3202 - transporter, putative 3177 66.75 +1 3636070..3637260 + 396 26989922 - PP_3203 - major facilitator family transporter 3178 62.76 0 3637418..3638005 + 195 26989923 - PP_3204 - hypothetical protein 3179 67.27 +1 3638002..3638994 + 330 26989924 - PP_3205 - fumarylacetoacetate hydrolase family protein 3180 66.46 +1 3638985..3639971 + 328 26989925 - PP_3206 - hypothetical protein 3181 62.07 0 3639968..3640750 + 260 26989926 - PP_3207 - cyclase, putative 3182 64.55 0 3640830..3641774 - 314 26989927 - PP_3208 - Pdr/VanB family oxidoreductase 3183 66.32 +1 3641771..3643201 - 476 26989928 - PP_3209 - amidohydrolase 3184 64.18 0 3643240..3644043 - 267 26989929 - PP_3210 - ABC transporter, permease protein 3185 64.19 0 3644054..3644902 - 282 26989930 - PP_3211 - ABC transporter, ATP-binding protein 3186 60.33 0 3644968..3645993 - 341 26989931 - PP_3212 - Rieske 2Fe-2S family protein 3187 60.35 0 3646032..3647060 - 342 26989932 - PP_3213 - ABC transporter, periplasmic binding component-related protein 3188 55.89 -1 3647714..3648520 + 268 26989933 - PP_3214 - hypothetical protein 3189 63.88 0 3650211..3650819 - 202 26989934 - PP_3216 - hypothetical protein 3190 64.96 0 3651116..3652054 + 312 26989935 - PP_3217 - periplasmic aliphatic sulfonate-binding protein, putative 3191 63.64 0 3652112..3653431 + 439 26989936 - PP_3218 - NtaA/SnaA/SoxA family monooxygenase 3192 65.76 0 3653529..3654629 - 366 26989937 - PP_3219 - alkansulfonate monooxygenase, putative 3193 67.16 +1 3654770..3656389 - 539 26989938 - PP_3220 - ABC transporter, ATP-binding protein 3194 70.08 +2 3656386..3657294 - 302 26989939 - PP_3221 - ABC transporter, permease protein 3195 66.56 +1 3657296..3658246 - 316 26989940 - PP_3222 - ABC transporter, permease protein 3196 64.69 0 3658243..3659862 - 539 26989941 - PP_3223 - ABC transporter, periplasmic binding protein 3197 63.02 0 3659937..3660731 - 264 26989942 - PP_3224 - hypothetical protein 3198 67.51 +1 3660747..3661691 - 314 26989943 - PP_3225 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 3199 68.50 +1 3661688..3662830 - 380 26989944 - PP_3226 - acyl-CoA dehydrogenase-related protein 3200 63.97 0 3663016..3663906 - 296 26989945 - PP_3227 - LysR family transcriptional regulator 3201 67.49 +1 3664108..3665073 + 321 26989946 - PP_3228 - periplasmic aliphatic sulfonate-binding protein, putative 3202 65.31 0 3665090..3666046 + 318 26989947 - PP_3229 - periplasmic aliphatic sulfonate-binding protein, putative 3203 65.22 0 3666362..3667054 + 230 26989948 - PP_3230 - phosphoribosyl transferase domain-containing protein 3204 61.77 0 3667316..3668683 - 455 26989949 - PP_3231 - hypothetical protein 3205 62.11 0 3668743..3669312 - 189 26989950 - PP_3232 - acetyltransferase 3206 62.16 0 3669704..3670435 + 243 26989951 - PP_3233 - Crp/FNR family transcriptional regulator 3207 59.34 0 3671193..3671888 + 231 26989952 - PP_3234 - HSP20 family protein 3208 61.83 0 3671947..3672339 + 130 26989953 - PP_3235 - hypothetical protein 3209 64.29 0 3672538..3672789 + 83 26989954 - PP_3236 - lipoprotein OprI, putative 3210 63.75 0 3672950..3673840 + 296 26989955 - PP_3237 - universal stress protein 3211 63.00 0 3673980..3674552 - 190 26989956 - PP_3238 - transcriptional regulator PyrR, putative 3212 63.02 0 3674784..3675770 + 328 26989957 - PP_3239 - Tn4652, cointegrate resolution protein T, putative 3213 59.39 0 3675826..3675990 + 54 26989958 - PP_3240 - hypothetical protein 3214 56.69 -1 3676342..3676842 - 166 26989959 - PP_3241 - hypothetical protein 3215 63.42 0 3676995..3678563 + 522 26989960 - PP_3242 - GGDEF domain-containing protein 3216 63.14 0 3678606..3679115 - 169 26989961 - PP_3243 - acetyltransferase 3217 64.71 0 3679133..3679846 - 237 26989962 mgtC PP_3244 - magnesium transporter MgtC family protein 3218 61.29 0 3679953..3680231 - 92 26989963 - PP_3245 - hypothetical protein 3219 62.82 0 3680244..3680711 + 155 26989964 crtZ PP_3246 - beta-carotene hydroxylase 3220 61.86 0 3680755..3681648 - 297 26989965 - PP_3247 - bile acid/Na+ symporter family protein 3221 66.32 +1 3681833..3682696 + 287 26989966 - PP_3248 - Dyp-type peroxidase family 3222 63.37 0 3682879..3683697 + 272 26989967 - PP_3249 - aldo/keto reductase 3223 64.17 0 3683702..3684985 + 427 26989968 - PP_3250 - major facilitator transporter 3224 62.54 0 3685590..3686921 + 443 26989969 - PP_3251 - hypothetical protein 3225 63.62 0 3686924..3687874 + 316 26989970 - PP_3252 - HemK family modification methylase 3226 63.87 0 3687881..3688987 + 368 26989971 - PP_3253 - carboxylate-amine ligase 3227 59.94 0 3688978..3689631 + 217 26989972 - PP_3254 - nucleosidase, putative 3228 60.83 0 3689717..3690538 + 273 26989973 - PP_3255 - hypothetical protein 3229 66.97 +1 3690560..3691219 - 219 26989974 - PP_3256 - glycosyl transferase, group 2 family protein 3230 63.00 0 3691216..3691815 - 199 26989975 - PP_3257 - methyltransferase, putative 3231 67.86 +1 3691827..3692582 - 251 26989976 - PP_3258 - LmbE family protein 3232 64.56 0 3692579..3693622 - 347 26989977 - PP_3259 - acyl-CoA dehydrogenase-related protein 3233 62.63 0 3693663..3696164 - 833 26989978 ligD PP_3260 - ATP-dependent DNA ligase 3234 67.41 +1 3696355..3696756 + 133 26989979 - PP_3261 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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